Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690868

Identifier: 116690868

GI number: 116690868

Start: 3148858

End: 3149382

Strand: Reverse

Name: 116690868

Synonym: Bcen2424_2848

Alternate gene names: NA

Gene position: 3149382-3148858 (Counterclockwise)

Preceding gene: 116690869

Following gene: 116690867

Centisome position: 90.4

GC content: 64.0

Gene sequence:

>525_bases
ATGCAGGCATGCATCGCATGCCATTCGCGTGAGGCGGCGATGGAAGCAGCGAGGGTTTTGGCGGAGACGGCGGACAGCGA
ACCGGTCCTCGAAGACTGGCTCATGAAACGCAACTGTTCGGTGTCGCCACGCCAGTTCGTGCTGTTTTACGCGTCGCTCG
CGGGCTTCTCGCTGGCGATCGCGGCGTTGCTGTTGTGGAGAGGGGTCTGGCTCGTCATGCCCTTTACCGGAATCGAGTTG
CTGGCGGTGGGTGTCGCATTTGCGATCTATGCTCGCCATGCGGTCGATTACGAGCGCATCAGGCTGTTTCCGCACCGGCT
CGTGATCGAGCGCATGGATGCGGAGCGGCTCACGCAGATCGAATTCAACCCGCGCTGGGTGCGGGTCGAGCCGGGTGCGA
CGCCACGCGATCCGATTCGGCTGGTATCGCGCGGGCAGACCGTCGTAATCGGGCAGCATCTCGCGCAGTACAAGCGTGCG
CAGTTCGCCGACGAGCTGCGCGTGTCGCTCAGGCGCTGCGGCTGA

Upstream 100 bases:

>100_bases
TTGGCGGGCGATAGGCGCTTGCTTGTGGATGCCATTGAACCCGCCTATAATGCGTCAGCTTGTCGTCCCGGGGTCCCCGC
AATACGGGGCGACGAGTCCG

Downstream 100 bases:

>100_bases
CGAGGCGCGGTCATTGGCCGGACGAGGCTGGTGGCTTGCGACGGGGGAGGGTTTGAATGGAAATTTTGGGTAAGGATGCT
ATGAAAACAATCAAGCGAGC

Product: integral membrane protein-like protein

Products: NA

Alternate protein names: Integral Membrane Protein; Integral Membrane Protein-Like Protein

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQACIACHSREAAMEAARVLAETADSEPVLEDWLMKRNCSVSPRQFVLFYASLAGFSLAIAALLLWRGVWLVMPFTGIEL
LAVGVAFAIYARHAVDYERIRLFPHRLVIERMDAERLTQIEFNPRWVRVEPGATPRDPIRLVSRGQTVVIGQHLAQYKRA
QFADELRVSLRRCG

Sequences:

>Translated_174_residues
MQACIACHSREAAMEAARVLAETADSEPVLEDWLMKRNCSVSPRQFVLFYASLAGFSLAIAALLLWRGVWLVMPFTGIEL
LAVGVAFAIYARHAVDYERIRLFPHRLVIERMDAERLTQIEFNPRWVRVEPGATPRDPIRLVSRGQTVVIGQHLAQYKRA
QFADELRVSLRRCG
>Mature_174_residues
MQACIACHSREAAMEAARVLAETADSEPVLEDWLMKRNCSVSPRQFVLFYASLAGFSLAIAALLLWRGVWLVMPFTGIEL
LAVGVAFAIYARHAVDYERIRLFPHRLVIERMDAERLTQIEFNPRWVRVEPGATPRDPIRLVSRGQTVVIGQHLAQYKRA
QFADELRVSLRRCG

Specific function: Unknown

COG id: COG5488

COG function: function code S; Integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19780; Mature: 19780

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQACIACHSREAAMEAARVLAETADSEPVLEDWLMKRNCSVSPRQFVLFYASLAGFSLAI
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AALLLWRGVWLVMPFTGIELLAVGVAFAIYARHAVDYERIRLFPHRLVIERMDAERLTQI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHEE
EFNPRWVRVEPGATPRDPIRLVSRGQTVVIGQHLAQYKRAQFADELRVSLRRCG
ECCCEEEEECCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQACIACHSREAAMEAARVLAETADSEPVLEDWLMKRNCSVSPRQFVLFYASLAGFSLAI
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AALLLWRGVWLVMPFTGIELLAVGVAFAIYARHAVDYERIRLFPHRLVIERMDAERLTQI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHEE
EFNPRWVRVEPGATPRDPIRLVSRGQTVVIGQHLAQYKRAQFADELRVSLRRCG
ECCCEEEEECCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA