Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690855

Identifier: 116690855

GI number: 116690855

Start: 3138443

End: 3138733

Strand: Direct

Name: 116690855

Synonym: Bcen2424_2835

Alternate gene names: NA

Gene position: 3138443-3138733 (Clockwise)

Preceding gene: 116690852

Following gene: 116690861

Centisome position: 90.08

GC content: 67.01

Gene sequence:

>291_bases
ATGTACGTCATCGACATCCACTACACCGCGTCGCTCGAGCGCATCGACGACGCGCTCGAACGCCACCGCGCGTACCTGCA
GCCGCAGTTCGACAAGGGCATCTTCATCGCGGCGGGGCCGAAGGTGCCGCGCGAAGGCGGCGTGATCCTCGCGGCCCGCA
TCGATCGCGACGAACTCGACGCGATCCTCGAAACCGACCCGTTCGTCACCGAGGGGCTCGCCACCTATCGCGTGACGGAA
TTCCGGATCACGCGCGCCGCGTCGGGCTTCAACGTGCCGGCGTTGCCGTAA

Upstream 100 bases:

>100_bases
CGACAAACGCACCGCCCGCCGGCGCGACAGCCCGCATCCGCTGTGCTAAAAAGACCGGCTGACCGGCGCACAAGGCGCCG
GCATCATTCCAGGGCCATCC

Downstream 100 bases:

>100_bases
CGCGGCGTCGGCGCAATACGCACGCAATACGCGCGCATGCCGACGCGCCGCCCGGCGGGCAGCGCATGCGCACGACAACG
AGAGCGGGAAAACGCGACGG

Product: YCII-related

Products: NA

Alternate protein names: YCII-Related Protein; YCII-Related Domain Superfamily Protein; YCII-Related Domain-Containing Protein; Ycii-Related Protein; YCII-Related Domain Superfamily; YCII-Like Protein; GTP Cyclohydrolase II; YciI Domain-Containing Protein; YciL Domain-Containing Protein; YCII-Related Domain Family Protein

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MYVIDIHYTASLERIDDALERHRAYLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELDAILETDPFVTEGLATYRVTE
FRITRAASGFNVPALP

Sequences:

>Translated_96_residues
MYVIDIHYTASLERIDDALERHRAYLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELDAILETDPFVTEGLATYRVTE
FRITRAASGFNVPALP
>Mature_96_residues
MYVIDIHYTASLERIDDALERHRAYLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELDAILETDPFVTEGLATYRVTE
FRITRAASGFNVPALP

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10746; Mature: 10746

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVIDIHYTASLERIDDALERHRAYLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELD
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHH
AILETDPFVTEGLATYRVTEFRITRAASGFNVPALP
HHHCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MYVIDIHYTASLERIDDALERHRAYLQPQFDKGIFIAAGPKVPREGGVILAARIDRDELD
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHH
AILETDPFVTEGLATYRVTEFRITRAASGFNVPALP
HHHCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA