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The map label for this gene is tse [H]

Identifier: 116690854

GI number: 116690854

Start: 3136578

End: 3138215

Strand: Reverse

Name: tse [H]

Synonym: Bcen2424_2834

Alternate gene names: 116690854

Gene position: 3138215-3136578 (Counterclockwise)

Preceding gene: 116690856

Following gene: 116690853

Centisome position: 90.08

GC content: 70.39

Gene sequence:

>1638_bases
ATGAGCAGAATGAGTTTGAACCGCAAGCTGTGGCTCGCGCTTGCGCTGGTATGGATCGGTCTTCTGGGCGTCGGCGCATG
GAGCGCCTACGAGACGCGCGCGACGATGCTCGCCGAACGCAAGGCCGGCATCGCGAATCTCGTCGACTCGGCGGCGGGCA
TCGTGAAGGCCTATCACGCGCTCGCGCAGAACGGCACGCTGCCCGAGGCCGACGCGAAGCGCGACGCGCTCGCGCGCCTG
GCCGCGATGCGCTACGGCGATTCGGGCTATGTGTTCGTGATGGATTCGAAGCCGGTCGTGCTGATGCATCCGACGCTGCC
GAAGCTCGTCGACACGCAGGTCGGCGACTATCTCGATCCGGACGGCAAGCCGCTGTTCGTGACGATCCTGAACGCCGCGA
AGGCAACCGGCAGCGGATTCGCCGAATATCGCGGGCGCTTGCCGCACAGCGAGACGGCCGTGCCGAAGATCAGCTACGTC
ACGCGGTTCGCGCCGTGGGACTGGAACATCTCGAGCGGCGTGTTCCTGAAGGACATCGACACCGTCTACTACCGGACGCT
GCTCGGCCACCTGGCCGTGGTGTTCGTGATCGGCTTCGTGATCAGCGCGGCGATGCTGGTGATCATCCGCAACGTGCGCG
GCAGCCTCGGCGGCGAGCCGGACGAAGCGGCCGCGCTCGCGGCGCGCATCGCGCAGGGCGACCTCACGCTGCCGGTGCCG
GTGCGCGCGGGCGACCGCACGAGCATGATGGCCGCGATGCACGACATGCAGGCGCGGCTGCAGGCGACGATCGGCGGGAT
TCGCCAGTCGGCCGAAGCGATCGCGTCGGCGAGCCGCCAGATCTCGGCCGGCAACGACGACCTGTCGCAGCGCACCGAGG
AGCAGGCCGCGTCGCTCGAGGAAACGGCCGCGAGCATGGAGCAGCTGACCGCGACGGTGAAGCAGAACGCCGACAACGCG
CGGCAGGCGAGCGGGCTCGCGAACAACGCGTCGGACATCGCGCGCACCGGCAGCGACGTCGTGAACCGCGTGATCGGCAC
GATGGGCGAGATCGACGACAGTTCGCGCAAGATCGCCGACATCATCGGCGTGATCGAGGGCATCGCATTCCAGACCAACA
TCCTCGCGCTGAACGCGGCGGTCGAGGCCGCCCGTGCGGGCGAGCAGGGGCGCGGCTTCGCGGTGGTCGCGGGCGAGGTG
CGTTCGCTCGCGCAGCGCAGCGCGACGGCCGCGAAGGAGATTCGCGAGCTGATCGTCGATTCGGTCGAGCGCGTGCGCAA
CGGCTCGACGCTGGTCGGCCAGGCCGGCACGACGATGGGCGAGATCCTGCAGGCGGTCGCGCGCGTGACCGACATCATGG
GCGAGATCGCGGCCGCGTCCGAGGAGCAGGCGAGCGGCATCACGCAGGTCGGGCGCGCGGTCACGCAGATGGACCAGGTG
ACGCAGCAGAACGCGGCGCTGGTCGAGGAAGCCGCGGCGGCGGCCGCGTCGCTGCAGGAGCAGGCCGTACGGCTGCGCGA
CGCGGTCGGCGCGTTCCGGGTCGGCAATACCGGCGGCGCGTCGCCGCGCGGAGCCGGCGCGCGGGCAGCCGAGCCGGCCT
TCGGCAAGCAGACGGCCGACGAGGCGGTGGCGGCGTGA

Upstream 100 bases:

>100_bases
TTCAAGATGTAAGCCTCGTTGCCGTAAATAAAAGAGCAACCGTTTGCGCGCGGCAGGCCGTTCGCGCGCCGGATGCATCG
ACATCGACAGAGGCACGCAG

Downstream 100 bases:

>100_bases
CGCGGTCGGTCGACGGACCGATGCGTTGAGTGAGAAATGCAACTAACGGCCGAGTCGACACGTCGGCCGCCAGCACTGCG
CTGGTGCATACCCATATGAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MSRMSLNRKLWLALALVWIGLLGVGAWSAYETRATMLAERKAGIANLVDSAAGIVKAYHALAQNGTLPEADAKRDALARL
AAMRYGDSGYVFVMDSKPVVLMHPTLPKLVDTQVGDYLDPDGKPLFVTILNAAKATGSGFAEYRGRLPHSETAVPKISYV
TRFAPWDWNISSGVFLKDIDTVYYRTLLGHLAVVFVIGFVISAAMLVIIRNVRGSLGGEPDEAAALAARIAQGDLTLPVP
VRAGDRTSMMAAMHDMQARLQATIGGIRQSAEAIASASRQISAGNDDLSQRTEEQAASLEETAASMEQLTATVKQNADNA
RQASGLANNASDIARTGSDVVNRVIGTMGEIDDSSRKIADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RSLAQRSATAAKEIRELIVDSVERVRNGSTLVGQAGTTMGEILQAVARVTDIMGEIAAASEEQASGITQVGRAVTQMDQV
TQQNAALVEEAAAAAASLQEQAVRLRDAVGAFRVGNTGGASPRGAGARAAEPAFGKQTADEAVAA

Sequences:

>Translated_545_residues
MSRMSLNRKLWLALALVWIGLLGVGAWSAYETRATMLAERKAGIANLVDSAAGIVKAYHALAQNGTLPEADAKRDALARL
AAMRYGDSGYVFVMDSKPVVLMHPTLPKLVDTQVGDYLDPDGKPLFVTILNAAKATGSGFAEYRGRLPHSETAVPKISYV
TRFAPWDWNISSGVFLKDIDTVYYRTLLGHLAVVFVIGFVISAAMLVIIRNVRGSLGGEPDEAAALAARIAQGDLTLPVP
VRAGDRTSMMAAMHDMQARLQATIGGIRQSAEAIASASRQISAGNDDLSQRTEEQAASLEETAASMEQLTATVKQNADNA
RQASGLANNASDIARTGSDVVNRVIGTMGEIDDSSRKIADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RSLAQRSATAAKEIRELIVDSVERVRNGSTLVGQAGTTMGEILQAVARVTDIMGEIAAASEEQASGITQVGRAVTQMDQV
TQQNAALVEEAAAAAASLQEQAVRLRDAVGAFRVGNTGGASPRGAGARAAEPAFGKQTADEAVAA
>Mature_544_residues
SRMSLNRKLWLALALVWIGLLGVGAWSAYETRATMLAERKAGIANLVDSAAGIVKAYHALAQNGTLPEADAKRDALARLA
AMRYGDSGYVFVMDSKPVVLMHPTLPKLVDTQVGDYLDPDGKPLFVTILNAAKATGSGFAEYRGRLPHSETAVPKISYVT
RFAPWDWNISSGVFLKDIDTVYYRTLLGHLAVVFVIGFVISAAMLVIIRNVRGSLGGEPDEAAALAARIAQGDLTLPVPV
RAGDRTSMMAAMHDMQARLQATIGGIRQSAEAIASASRQISAGNDDLSQRTEEQAASLEETAASMEQLTATVKQNADNAR
QASGLANNASDIARTGSDVVNRVIGTMGEIDDSSRKIADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
SLAQRSATAAKEIRELIVDSVERVRNGSTLVGQAGTTMGEILQAVARVTDIMGEIAAASEEQASGITQVGRAVTQMDQVT
QQNAALVEEAAAAAASLQEQAVRLRDAVGAFRVGNTGGASPRGAGARAAEPAFGKQTADEAVAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=348, Percent_Identity=56.6091954022989, Blast_Score=318, Evalue=5e-88,
Organism=Escherichia coli, GI2367378, Length=325, Percent_Identity=61.2307692307692, Blast_Score=317, Evalue=1e-87,
Organism=Escherichia coli, GI1788195, Length=315, Percent_Identity=61.5873015873016, Blast_Score=314, Evalue=9e-87,
Organism=Escherichia coli, GI1788194, Length=284, Percent_Identity=60.9154929577465, Blast_Score=301, Evalue=6e-83,
Organism=Escherichia coli, GI1789453, Length=250, Percent_Identity=45.2, Blast_Score=205, Evalue=6e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57126; Mature: 56995

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRMSLNRKLWLALALVWIGLLGVGAWSAYETRATMLAERKAGIANLVDSAAGIVKAYHA
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQNGTLPEADAKRDALARLAAMRYGDSGYVFVMDSKPVVLMHPTLPKLVDTQVGDYLDP
HHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHCCCCCC
DGKPLFVTILNAAKATGSGFAEYRGRLPHSETAVPKISYVTRFAPWDWNISSGVFLKDID
CCCEEEEEEEHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCHHHHH
TVYYRTLLGHLAVVFVIGFVISAAMLVIIRNVRGSLGGEPDEAAALAARIAQGDLTLPVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECCC
VRAGDRTSMMAAMHDMQARLQATIGGIRQSAEAIASASRQISAGNDDLSQRTEEQAASLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ETAASMEQLTATVKQNADNARQASGLANNASDIARTGSDVVNRVIGTMGEIDDSSRKIAD
HHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHH
IIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIRELIVD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
SVERVRNGSTLVGQAGTTMGEILQAVARVTDIMGEIAAASEEQASGITQVGRAVTQMDQV
HHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHH
TQQNAALVEEAAAAAASLQEQAVRLRDAVGAFRVGNTGGASPRGAGARAAEPAFGKQTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHH
EAVAA
HHHCC
>Mature Secondary Structure 
SRMSLNRKLWLALALVWIGLLGVGAWSAYETRATMLAERKAGIANLVDSAAGIVKAYHA
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQNGTLPEADAKRDALARLAAMRYGDSGYVFVMDSKPVVLMHPTLPKLVDTQVGDYLDP
HHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHCCCCCC
DGKPLFVTILNAAKATGSGFAEYRGRLPHSETAVPKISYVTRFAPWDWNISSGVFLKDID
CCCEEEEEEEHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCHHHHH
TVYYRTLLGHLAVVFVIGFVISAAMLVIIRNVRGSLGGEPDEAAALAARIAQGDLTLPVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECCC
VRAGDRTSMMAAMHDMQARLQATIGGIRQSAEAIASASRQISAGNDDLSQRTEEQAASLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ETAASMEQLTATVKQNADNARQASGLANNASDIARTGSDVVNRVIGTMGEIDDSSRKIAD
HHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHH
IIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIRELIVD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
SVERVRNGSTLVGQAGTTMGEILQAVARVTDIMGEIAAASEEQASGITQVGRAVTQMDQV
HHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHH
TQQNAALVEEAAAAAASLQEQAVRLRDAVGAFRVGNTGGASPRGAGARAAEPAFGKQTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHH
EAVAA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]