| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is kefB [H]
Identifier: 116690805
GI number: 116690805
Start: 3081696
End: 3083702
Strand: Reverse
Name: kefB [H]
Synonym: Bcen2424_2785
Alternate gene names: 116690805
Gene position: 3083702-3081696 (Counterclockwise)
Preceding gene: 116690817
Following gene: 116690804
Centisome position: 88.51
GC content: 68.11
Gene sequence:
>2007_bases GTGATTTCCCCGCTCGAAATGACCCTGCTGCTGCTGCTGGCCTCAGTGGTGGGCGTCGTCGTATTCCGCTCGTTGAACCT GCCGCCGATGCTCGGCTACCTGACCGTCGGCATCCTGGTCGGCCCGCACGCATTCGGCGTCGCGGCGGATCTCGAACGGG CCGAGCACCTCGCGGAATTCGGCGTGGTGTTCCTGATGTTTTCGATCGGCCTCGAATTCTCGCTGGCGAAGCTGAGGTCG ATGCAGCGGCTCGTGTTCGGCCTCGGCCTCTTGCAGGTCGTCGCGACCCTCGTGCTCGCGCTCGTGCTCGGCGCGCTGTT CGAGCACTGGGTGCACATCACATGGCAGGGCAGCATCGCGCTCGGCGGCGCGCTCGCGATGTCGTCGACGGCGATCGTGT CGAAGATGCTCGCCGAGCGGCTCGAGATCGAGACCGAGCACGGCCGCAACATCTTCGGCGTGCTGCTGTTCCAGGATCTC GCGGTGGTGCCGCTCTTGATCGTGATCGCCGCGTTCGGCGCGGAATCGTCGAAGGATCTCGCGCTCACGCTAGGCTTCGC GGCGGTCAAGATCGTGATCGCGCTCGCGCTGCTGCTCGTCATCGGCCAGCGCTTCATGACGCGCTGGCTCAACGTCGTCG CGCGGCGCCGCTCGCAGGAGCTGTTCGTGCTGAACCTGCTGCTCGTCACGCTCGGCGCCGCGTTCATCACCGACCGCTTC GGGCTGTCGCTCGCGCTCGGCGCGTTCATCGCCGGGATGCTCATTTCCGAGACGCCGTTCCGCCATCAGGTGGAGGAGGA CATCAAGCCGTTCCGCGACGTGCTGCTCGGCCTGTTCTTCGTGACGACGGGGATGCTGCTCGATCCGCGCGTGATCTGGG AGCATCCGTTGATCGTGCTCGGCTTCTTCGTCGGGCAGATCCTGTTCAAGGCGACGATGATCGCCGGGCTCGCGCGGCTG TTCGGCGCGACGCCGGGCGTCGCGATGCGCACCGGCATCGGCCTCGCGCAGGCCGGCGAATTCGGCTTCGTGCTGCTGAA CCTGATCCTCGACCGGCATCTCGTCGATTCGACGCTGCTGCAGGCGATCCTCGCGTCGATGCTGCTGTCGATGCTCGCCG CGCCGTTCCTGATCCAGAACGCCGACCGCATCGTGATGCGGCTGTCGTCGACGGAATGGATGCAGCAGTCGCTGCAGATG ACGCGGATCGCGACGCAAAGCCTCAAGCAGCGCGGCCACGTGATCATCTGCGGCTACGGCCGCGCCGGGCAGAACCTCGC GCGCATGCTCGAACAGGAAGGCATTTCGTACGTCGCGCTCGACCTCGACCCCGATCGCGTGAGTGCTGCGGCGACCGCCG GCGAATCGGTCGTGTTCGGCGACGCGGCGCGCCGCGAGTCGCTGCTCGCGGCCGGTATCCACCGGGCGGCGGCCGTCGCG ATTACCTACGCGAACACGCCGTCCGCGCTGCGCGTGCTGCATCACGTGCACGAGCTCGAGCCGACGCTGCCCGCGATCGT GCGTACCGTCGACGATGCCGATCTCGAGAAGCTGCTTGCTGCCGGCGCGACCGAGGTGATTCCGGAGATCGTCGAGGGCA GCCTGATGCTCGCGTCGCACACGCTGGTGCTGGTCGGCGTGCCGATGCGCAAGGTCGTGCGGCGCGTCGAGGAGATGCGC GACGAGCGCTACAGCCTGCTGCGCGGCTATTTCCGCGGCGCGGACGATGCGGACGACGACGATCACGAGCAGGTGCGGCT ACAATCGGTGCCGGTCGATGCGCGCGCGGACGCGGTCGGGCGTTCGCTGGAAGAACTCGGGCTGTACGCGCTCGGGCTGG AAGTCACGGCGATCCGCCGGCACGGCATCCGCGGCGTCGAACCCGATCCGCAGACCAAGCTGCGCGCGAGCGACATCGTG GTGCTGCGCGGGCTGCCCGAGGCGCTCGCGCTCGCGGAGGAGCGGTTGTCGCGCCATCGGCGCGATCCGCCGGCCGCGGT TGCGTGA
Upstream 100 bases:
>100_bases GTTCGCCGCGCCGGCCTTCGGACTCGTCCGAAGCAGCCTGTCCACCGCCACCACCCGCGCCCGCATTGCCGTGGCCCCGA CGAACGAGGATGCTTCGCCT
Downstream 100 bases:
>100_bases GCCGCGATTCACAACCCGACCCGTATTGATCAGAAACGGTGCCCGATCTTCGCGCACCGTTTTTTTCGGAGAGTTTCATG CCGCATTCGTCGCCGGGCGC
Product: sodium/hydrogen exchanger
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 668; Mature: 668
Protein sequence:
>668_residues MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHAFGVAADLERAEHLAEFGVVFLMFSIGLEFSLAKLRS MQRLVFGLGLLQVVATLVLALVLGALFEHWVHITWQGSIALGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDL AVVPLLIVIAAFGAESSKDLALTLGFAAVKIVIALALLLVIGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRF GLSLALGAFIAGMLISETPFRHQVEEDIKPFRDVLLGLFFVTTGMLLDPRVIWEHPLIVLGFFVGQILFKATMIAGLARL FGATPGVAMRTGIGLAQAGEFGFVLLNLILDRHLVDSTLLQAILASMLLSMLAAPFLIQNADRIVMRLSSTEWMQQSLQM TRIATQSLKQRGHVIICGYGRAGQNLARMLEQEGISYVALDLDPDRVSAAATAGESVVFGDAARRESLLAAGIHRAAAVA ITYANTPSALRVLHHVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASHTLVLVGVPMRKVVRRVEEMR DERYSLLRGYFRGADDADDDDHEQVRLQSVPVDARADAVGRSLEELGLYALGLEVTAIRRHGIRGVEPDPQTKLRASDIV VLRGLPEALALAEERLSRHRRDPPAAVA
Sequences:
>Translated_668_residues MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHAFGVAADLERAEHLAEFGVVFLMFSIGLEFSLAKLRS MQRLVFGLGLLQVVATLVLALVLGALFEHWVHITWQGSIALGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDL AVVPLLIVIAAFGAESSKDLALTLGFAAVKIVIALALLLVIGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRF GLSLALGAFIAGMLISETPFRHQVEEDIKPFRDVLLGLFFVTTGMLLDPRVIWEHPLIVLGFFVGQILFKATMIAGLARL FGATPGVAMRTGIGLAQAGEFGFVLLNLILDRHLVDSTLLQAILASMLLSMLAAPFLIQNADRIVMRLSSTEWMQQSLQM TRIATQSLKQRGHVIICGYGRAGQNLARMLEQEGISYVALDLDPDRVSAAATAGESVVFGDAARRESLLAAGIHRAAAVA ITYANTPSALRVLHHVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASHTLVLVGVPMRKVVRRVEEMR DERYSLLRGYFRGADDADDDDHEQVRLQSVPVDARADAVGRSLEELGLYALGLEVTAIRRHGIRGVEPDPQTKLRASDIV VLRGLPEALALAEERLSRHRRDPPAAVA >Mature_668_residues MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHAFGVAADLERAEHLAEFGVVFLMFSIGLEFSLAKLRS MQRLVFGLGLLQVVATLVLALVLGALFEHWVHITWQGSIALGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDL AVVPLLIVIAAFGAESSKDLALTLGFAAVKIVIALALLLVIGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRF GLSLALGAFIAGMLISETPFRHQVEEDIKPFRDVLLGLFFVTTGMLLDPRVIWEHPLIVLGFFVGQILFKATMIAGLARL FGATPGVAMRTGIGLAQAGEFGFVLLNLILDRHLVDSTLLQAILASMLLSMLAAPFLIQNADRIVMRLSSTEWMQQSLQM TRIATQSLKQRGHVIICGYGRAGQNLARMLEQEGISYVALDLDPDRVSAAATAGESVVFGDAARRESLLAAGIHRAAAVA ITYANTPSALRVLHHVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASHTLVLVGVPMRKVVRRVEEMR DERYSLLRGYFRGADDADDDDHEQVRLQSVPVDARADAVGRSLEELGLYALGLEVTAIRRHGIRGVEPDPQTKLRASDIV VLRGLPEALALAEERLSRHRRDPPAAVA
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=343, Percent_Identity=28.2798833819242, Blast_Score=103, Evalue=5e-22, Organism=Escherichia coli, GI1786232, Length=512, Percent_Identity=33.3984375, Blast_Score=244, Evalue=2e-65, Organism=Escherichia coli, GI1789749, Length=550, Percent_Identity=32, Blast_Score=239, Evalue=6e-64, Organism=Escherichia coli, GI1786685, Length=535, Percent_Identity=30.0934579439252, Blast_Score=199, Evalue=5e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 72580; Mature: 72580
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHAFGVAADLERAEHLAEF CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GVVFLMFSIGLEFSLAKLRSMQRLVFGLGLLQVVATLVLALVLGALFEHWVHITWQGSIA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEE LGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDLAVVPLLIVIAAFGAESSKDL ECHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ALTLGFAAVKIVIALALLLVIGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRF EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GLSLALGAFIAGMLISETPFRHQVEEDIKPFRDVLLGLFFVTTGMLLDPRVIWEHPLIVL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHH GFFVGQILFKATMIAGLARLFGATPGVAMRTGIGLAQAGEFGFVLLNLILDRHLVDSTLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHH QAILASMLLSMLAAPFLIQNADRIVMRLSSTEWMQQSLQMTRIATQSLKQRGHVIICGYG HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC RAGQNLARMLEQEGISYVALDLDPDRVSAAATAGESVVFGDAARRESLLAAGIHRAAAVA CCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHEEE ITYANTPSALRVLHHVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASH EEECCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHEEEC TLVLVGVPMRKVVRRVEEMRDERYSLLRGYFRGADDADDDDHEQVRLQSVPVDARADAVG CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEHHCCCCCCHHHHHH RSLEELGLYALGLEVTAIRRHGIRGVEPDPQTKLRASDIVVLRGLPEALALAEERLSRHR CCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHC RDPPAAVA CCCCCCCC >Mature Secondary Structure MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHAFGVAADLERAEHLAEF CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GVVFLMFSIGLEFSLAKLRSMQRLVFGLGLLQVVATLVLALVLGALFEHWVHITWQGSIA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEE LGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDLAVVPLLIVIAAFGAESSKDL ECHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ALTLGFAAVKIVIALALLLVIGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRF EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GLSLALGAFIAGMLISETPFRHQVEEDIKPFRDVLLGLFFVTTGMLLDPRVIWEHPLIVL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHH GFFVGQILFKATMIAGLARLFGATPGVAMRTGIGLAQAGEFGFVLLNLILDRHLVDSTLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHH QAILASMLLSMLAAPFLIQNADRIVMRLSSTEWMQQSLQMTRIATQSLKQRGHVIICGYG HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC RAGQNLARMLEQEGISYVALDLDPDRVSAAATAGESVVFGDAARRESLLAAGIHRAAAVA CCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHEEE ITYANTPSALRVLHHVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASH EEECCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHEEEC TLVLVGVPMRKVVRRVEEMRDERYSLLRGYFRGADDADDDDHEQVRLQSVPVDARADAVG CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEHHCCCCCCHHHHHH RSLEELGLYALGLEVTAIRRHGIRGVEPDPQTKLRASDIVVLRGLPEALALAEERLSRHR CCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHC RDPPAAVA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA