| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690793
Identifier: 116690793
GI number: 116690793
Start: 3068886
End: 3069470
Strand: Reverse
Name: 116690793
Synonym: Bcen2424_2773
Alternate gene names: NA
Gene position: 3069470-3068886 (Counterclockwise)
Preceding gene: 116690794
Following gene: 116690792
Centisome position: 88.1
GC content: 68.89
Gene sequence:
>585_bases ATGTCCGTATTTGCCCCCGAAAAACTCGCCGCCGATTATCAATCCGGTATCGCCGCCTGGTTCGCGATCGCCCGTCCGGC GATCCACGGCTTCGAGGCCGTCGTCGAACTCAACCTGCAAGCGGCCCGGACGGCGCTCGAGGAATACGAGGACAAGCTGA AGAACGCGTTCAACGCCAACAACCCGGCCGCGGGTTTCGCGCAACAGGTCGCCGCGCCGCAGGAAGCGGCCGGCAAGGCC GTGTCGTATGGGCGCCATTTGTTCGACATCGCGGTGTCGACGCAGTCCGAATGGGCGAAGGTCGCGCAGGCGCAGTACGA ACAGAACGACAAGCGCCTGAAGGACGTGCTCGGCGAACTGTCGAAGCACGCGCCGGCCGGCTCGGCGCCGGTGGTGGCCG CGCTGAATTCGGCGCTGTCCGCGGCGAGCGCCGCGGCCGACTCCGTGCGTGCGGCGACGGGCCAGGCGATCGAAGCGGCG CAGAGCGGCTTCGATGCGGTCAGCGAAACGGCCACGCGCGGCGCCAAGCAGACGGCGGCCGCCGCCCGCAAGGACGCAGC GGCTGCGCGCGAATCGGCTGCGTAA
Upstream 100 bases:
>100_bases GCCCAAACAGGTAGCGGGTTGCCAATAAGGAAGCGACTGTCGATCAAGCTTCCACTTTTCTTTACGTTTGTCTCTCGCAT TGTTAACAGGAGCGTGCCCG
Downstream 100 bases:
>100_bases TCGCGCAAATGCGCGCATGAAGGCGCGCGTGAATGCGTGTCGCGCGTCGGCGCGACACGATTGATCGGCGCCGGACGGCG CCGGCGCCGCGTGTGCCACG
Product: phasin family protein
Products: NA
Alternate protein names: Phasin; Granule-Associated Protein; Phasin-Like Protein
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSVFAPEKLAADYQSGIAAWFAIARPAIHGFEAVVELNLQAARTALEEYEDKLKNAFNANNPAAGFAQQVAAPQEAAGKA VSYGRHLFDIAVSTQSEWAKVAQAQYEQNDKRLKDVLGELSKHAPAGSAPVVAALNSALSAASAAADSVRAATGQAIEAA QSGFDAVSETATRGAKQTAAAARKDAAAARESAA
Sequences:
>Translated_194_residues MSVFAPEKLAADYQSGIAAWFAIARPAIHGFEAVVELNLQAARTALEEYEDKLKNAFNANNPAAGFAQQVAAPQEAAGKA VSYGRHLFDIAVSTQSEWAKVAQAQYEQNDKRLKDVLGELSKHAPAGSAPVVAALNSALSAASAAADSVRAATGQAIEAA QSGFDAVSETATRGAKQTAAAARKDAAAARESAA >Mature_193_residues SVFAPEKLAADYQSGIAAWFAIARPAIHGFEAVVELNLQAARTALEEYEDKLKNAFNANNPAAGFAQQVAAPQEAAGKAV SYGRHLFDIAVSTQSEWAKVAQAQYEQNDKRLKDVLGELSKHAPAGSAPVVAALNSALSAASAAADSVRAATGQAIEAAQ SGFDAVSETATRGAKQTAAAARKDAAAARESAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19971; Mature: 19840
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFAPEKLAADYQSGIAAWFAIARPAIHGFEAVVELNLQAARTALEEYEDKLKNAFNAN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NPAAGFAQQVAAPQEAAGKAVSYGRHLFDIAVSTQSEWAKVAQAQYEQNDKRLKDVLGEL CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SKHAPAGSAPVVAALNSALSAASAAADSVRAATGQAIEAAQSGFDAVSETATRGAKQTAA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARKDAAAARESAA HHHHHHHHHHHCCC >Mature Secondary Structure SVFAPEKLAADYQSGIAAWFAIARPAIHGFEAVVELNLQAARTALEEYEDKLKNAFNAN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NPAAGFAQQVAAPQEAAGKAVSYGRHLFDIAVSTQSEWAKVAQAQYEQNDKRLKDVLGEL CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SKHAPAGSAPVVAALNSALSAASAAADSVRAATGQAIEAAQSGFDAVSETATRGAKQTAA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARKDAAAARESAA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA