| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is ntpA [H]
Identifier: 116690744
GI number: 116690744
Start: 3019172
End: 3019666
Strand: Reverse
Name: ntpA [H]
Synonym: Bcen2424_2724
Alternate gene names: 116690744
Gene position: 3019666-3019172 (Counterclockwise)
Preceding gene: 116690745
Following gene: 116690743
Centisome position: 86.67
GC content: 67.68
Gene sequence:
>495_bases ATGACGAAGCCGCCGAAAATCCCCGAATCCGTTCTCGTCGTGATCTACACGCCCGACCTCGATGTGCTCGTGATCAAGCG TGCCGACCAGCCCGATTTCTGGCAATCGGTCACCGGCTCGAAGGACACGCTCGACGAGCCGCTCGCGCTCACCGCCGCGC GTGAAGTGGCCGAGGAAACCGGCATCGCGGTCGGCACGCCGGACGTGCCGGCCAGCGCGCTCGTCGACTGGCATCACCGG ATCGAGTACACGATCTATCCGCAATACCTGCATCGCTATGCGCCGGGCGTCACGCGCAACGTCGAGCACTGGTTCGGCCT GTGCGTGCCGCATCGCGTCGACGTGACGCTGTCGCCGCGCGAGCATGTCGACCATGCGTGGCTGCCGTTCCGCGAGGCGG CCGCGCGCTGCTTCTCGCCATCGAACGCCGAGGCGATCCTGCAATTGCCCGCACGCGTGGCCCTCGCGCGTGCGCCGCAC GGCTCGTCCGCATGA
Upstream 100 bases:
>100_bases GCAGTGATGCGCCTTTTTCATTTTTTGCGGTACAGTCGCAGCACTTGCCGCACGTTCGGGCGCAGGCCCGGCGCATGGCC CTGTGCCGCATGAAACAAAG
Downstream 100 bases:
>100_bases ATGCGGAGACCCGCAAGCGCTTCGCGCAATTGCGGCAGATGTTCCTGCAGGAGCGCGGCTCCGCGTCGCGGCTCGCGTTT ACGGCCGGCAACACGGTGCG
Product: dATP pyrophosphohydrolase
Products: dAMP; pyrophosphate [C]
Alternate protein names: dATP pyrophosphohydrolase [H]
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTKPPKIPESVLVVIYTPDLDVLVIKRADQPDFWQSVTGSKDTLDEPLALTAAREVAEETGIAVGTPDVPASALVDWHHR IEYTIYPQYLHRYAPGVTRNVEHWFGLCVPHRVDVTLSPREHVDHAWLPFREAAARCFSPSNAEAILQLPARVALARAPH GSSA
Sequences:
>Translated_164_residues MTKPPKIPESVLVVIYTPDLDVLVIKRADQPDFWQSVTGSKDTLDEPLALTAAREVAEETGIAVGTPDVPASALVDWHHR IEYTIYPQYLHRYAPGVTRNVEHWFGLCVPHRVDVTLSPREHVDHAWLPFREAAARCFSPSNAEAILQLPARVALARAPH GSSA >Mature_163_residues TKPPKIPESVLVVIYTPDLDVLVIKRADQPDFWQSVTGSKDTLDEPLALTAAREVAEETGIAVGTPDVPASALVDWHHRI EYTIYPQYLHRYAPGVTRNVEHWFGLCVPHRVDVTLSPREHVDHAWLPFREAAARCFSPSNAEAILQLPARVALARAPHG SSA
Specific function: Catalyzes the hydrolysis of dihydroneopterin triphosphate to dihydroneopterin monophosphate and pyrophosphate. Required for efficient folate biosynthesis. Can also hydrolyze nucleoside triphosphates with a preference for dATP [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788172, Length=148, Percent_Identity=44.5945945945946, Blast_Score=106, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003564 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 18190; Mature: 18059
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPPKIPESVLVVIYTPDLDVLVIKRADQPDFWQSVTGSKDTLDEPLALTAAREVAEET CCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHC GIAVGTPDVPASALVDWHHRIEYTIYPQYLHRYAPGVTRNVEHWFGLCVPHRVDVTLSPR CCEECCCCCCHHHHHHHHHHEEEEECHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEECCH EHVDHAWLPFREAAARCFSPSNAEAILQLPARVALARAPHGSSA HHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKPPKIPESVLVVIYTPDLDVLVIKRADQPDFWQSVTGSKDTLDEPLALTAAREVAEET CCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHC GIAVGTPDVPASALVDWHHRIEYTIYPQYLHRYAPGVTRNVEHWFGLCVPHRVDVTLSPR CCEECCCCCCHHHHHHHHHHEEEEECHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEECCH EHVDHAWLPFREAAARCFSPSNAEAILQLPARVALARAPHGSSA HHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxy-ATP; H2O [C]
Specific reaction: deoxy-ATP + H2O = dAMP + pyrophosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]