Click here to switch to the map view.

The map label for this gene is 116690742

Identifier: 116690742

GI number: 116690742

Start: 3017102

End: 3017701

Strand: Reverse

Name: 116690742

Synonym: Bcen2424_2722

Alternate gene names: NA

Gene position: 3017701-3017102 (Counterclockwise)

Preceding gene: 116690743

Following gene: 116690741

Centisome position: 86.62

GC content: 64.33

Gene sequence:

>600_bases
ATGCGAAAAGGCGAACAGACGCGTGCCGCGATACTTGAAGCTGCTTTGGACCTTGCCAGCCGTGACGGGCTGGAGGGGCT
GACGATCGGCCTGCTGGCCGAGCGCATGCAGATGAGCAAGAGCGGCGTGTTCGCGCACTTCGGATCGCGCGAGGACCTGC
AGGTCGAGGTCGTCCGCGAGTACCACCATCGTTTCGAGAACGAGGTGTTCTTTCCGAGCCTGCGCGAGTCGCGCGGTCTG
CCGCGTCTTCGGGCGATGCTGGCGCGCTGGATCGAGAAGCGCATCCAGGAGGTGACGACCGGGTGCATCTACATCAGCGG
CGCAGTGGAGTACGACGACCGGCCGGACAGCCCCGTGCGCGAGCAGTTGATCGCGAGCGTGACCGCCTGGCGTGCCGCGT
TGCTGCGCGCCATTTCGCAGGCGATGGAAGAGGGGCATCTGCGTGCGGATACGGATCCGGAACTGATGCTCTTCGAGTTG
TACAGCTTCACGCTCGGCCTGCATCACGACGCACGCTTCCTGCATTCGCCGGACGCCGTGCGCCTCACGTGGGCCGCGCT
GGAAAAGACGATTGTTTCGTATCAGAGCGAGAGCCGTTAG

Upstream 100 bases:

>100_bases
ACCGGTTTCTAATAATTTCCTTGTTTCGCGAGCGGCCGCACTCAATAATAGTACGGCCGTTCGATTTTATTCGAACCCCC
GAACGGTTACAGAAATAGCT

Downstream 100 bases:

>100_bases
CGGCGCGTGACCCGCCCGCCAGGAGCTCGAGCCGTTTTGCCCACCTTTGGAGAGAGTCATGGGACAGTACGCCGCGCCGC
TGCGCGACATGCAATTCGTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; TetR Family Regulatory

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRKGEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHHRFENEVFFPSLRESRGL
PRLRAMLARWIEKRIQEVTTGCIYISGAVEYDDRPDSPVREQLIASVTAWRAALLRAISQAMEEGHLRADTDPELMLFEL
YSFTLGLHHDARFLHSPDAVRLTWAALEKTIVSYQSESR

Sequences:

>Translated_199_residues
MRKGEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHHRFENEVFFPSLRESRGL
PRLRAMLARWIEKRIQEVTTGCIYISGAVEYDDRPDSPVREQLIASVTAWRAALLRAISQAMEEGHLRADTDPELMLFEL
YSFTLGLHHDARFLHSPDAVRLTWAALEKTIVSYQSESR
>Mature_199_residues
MRKGEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHHRFENEVFFPSLRESRGL
PRLRAMLARWIEKRIQEVTTGCIYISGAVEYDDRPDSPVREQLIASVTAWRAALLRAISQAMEEGHLRADTDPELMLFEL
YSFTLGLHHDARFLHSPDAVRLTWAALEKTIVSYQSESR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22701; Mature: 22701

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVRE
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHH
YHHRFENEVFFPSLRESRGLPRLRAMLARWIEKRIQEVTTGCIYISGAVEYDDRPDSPVR
HHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEECEEECCCCCCCHHH
EQLIASVTAWRAALLRAISQAMEEGHLRADTDPELMLFELYSFTLGLHHDARFLHSPDAV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHH
RLTWAALEKTIVSYQSESR
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKGEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVRE
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHH
YHHRFENEVFFPSLRESRGLPRLRAMLARWIEKRIQEVTTGCIYISGAVEYDDRPDSPVR
HHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEECEEECCCCCCCHHH
EQLIASVTAWRAALLRAISQAMEEGHLRADTDPELMLFELYSFTLGLHHDARFLHSPDAV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHH
RLTWAALEKTIVSYQSESR
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA