| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690736
Identifier: 116690736
GI number: 116690736
Start: 3009118
End: 3009600
Strand: Reverse
Name: 116690736
Synonym: Bcen2424_2716
Alternate gene names: NA
Gene position: 3009600-3009118 (Counterclockwise)
Preceding gene: 116690738
Following gene: 116690734
Centisome position: 86.39
GC content: 65.22
Gene sequence:
>483_bases ATGGGACTCAGCGACGCTCCGTTGCTCTTCAACTTCGAACACGATTCGTCGGAAAACTTCACGTACATCCCGATGATCGT GCGTTTCAATCTCGACCGCTTCGGGCTGCGGATTTCGCTCGAACAGTGGCAACTGCTGCCGCTCGAGGACCGCAAGCTGC TCGCGCGCTTTCCGGCCGACGACGACACCGCGATCGAGCCCAATTTCGATCACGCGCTGTTCGAAATGCTGCGCACGCAC GCCGATCTGGAGCCGTCATGGTTCCAGCCGGACGAGCAACCGGCCTGGCGCACCGTCGACACGGTGCCGGCGTCGCTCGT GCAGCAAAGCGCGCTGGCCGGGCTGCCGGCGCCGGCGCTCGCGCAGTGGCAGCGGCTTGCGCCATTCCAGCGCTACGTGC TGGTCAAGCTGTCGCGCAAGCCGGCGCTGAATCACGATTTCGTGCCCGCGATGCGGGAGTTCGGGCTGGCCGCCACGCAC TGA
Upstream 100 bases:
>100_bases AGCGCGGCCGGCGACGATCGTACCGCCGCCCGCGCGCAGAGGTTCTAAAATACCCCAGGCAAGCCGGCCGCGCCGGCATC CGCCACGTCAGGTAACGACC
Downstream 100 bases:
>100_bases CCGGCCGTATGCCGCGCCGCATGCCGCGCTGCGCTGCGCTGCGGCGCGTGCGCATCAGAGCGGCGGCAGTTGGCGCGGCT TGCGGTCCGACCCGGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MGLSDAPLLFNFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPADDDTAIEPNFDHALFEMLRTH ADLEPSWFQPDEQPAWRTVDTVPASLVQQSALAGLPAPALAQWQRLAPFQRYVLVKLSRKPALNHDFVPAMREFGLAATH
Sequences:
>Translated_160_residues MGLSDAPLLFNFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPADDDTAIEPNFDHALFEMLRTH ADLEPSWFQPDEQPAWRTVDTVPASLVQQSALAGLPAPALAQWQRLAPFQRYVLVKLSRKPALNHDFVPAMREFGLAATH >Mature_159_residues GLSDAPLLFNFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPADDDTAIEPNFDHALFEMLRTHA DLEPSWFQPDEQPAWRTVDTVPASLVQQSALAGLPAPALAQWQRLAPFQRYVLVKLSRKPALNHDFVPAMREFGLAATH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18355; Mature: 18224
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSDAPLLFNFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPAD CCCCCCCEEEEECCCCCCCEEEEEEEEEECCCHHCEEEEECCEEECCCCCCHHHEECCCC DDTAIEPNFDHALFEMLRTHADLEPSWFQPDEQPAWRTVDTVPASLVQQSALAGLPAPAL CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH AQWQRLAPFQRYVLVKLSRKPALNHDFVPAMREFGLAATH HHHHHCCHHHHEEEEEECCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure GLSDAPLLFNFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPAD CCCCCCEEEEECCCCCCCEEEEEEEEEECCCHHCEEEEECCEEECCCCCCHHHEECCCC DDTAIEPNFDHALFEMLRTHADLEPSWFQPDEQPAWRTVDTVPASLVQQSALAGLPAPAL CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH AQWQRLAPFQRYVLVKLSRKPALNHDFVPAMREFGLAATH HHHHHCCHHHHEEEEEECCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA