| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is flbA [H]
Identifier: 116690720
GI number: 116690720
Start: 2989505
End: 2990995
Strand: Reverse
Name: flbA [H]
Synonym: Bcen2424_2700
Alternate gene names: 116690720
Gene position: 2990995-2989505 (Counterclockwise)
Preceding gene: 116690726
Following gene: 116690717
Centisome position: 85.85
GC content: 73.04
Gene sequence:
>1491_bases GTGCGGCTCACGACGACGCTCGTCGCGCGGCAGCGCCCGGCCGACGCGCTCGCGCTCGCCGAATGCGCGGTGCGCGTGCA GCCGGGCGCGGCCACGCACTTCAACCACGGCTACGCGCTGCAGATGGCCGGCCGTCACGCGGATGCGGTCGCGCCGTACC GCGCGGCGCTCGCGATCGATGCCGGCTGGCCGTCGCTGCGCAACAACCTCGCGATCGCGCTGCGCTTGTCGGGCGCGGAT CGCGCGGAAGAAATCGCGCTGCTCGACGCGGCCGTGAAGCACGATCCGCGGGACGTGCAGGCATGGATCAACCTCGTCGT CGCGCGGATCGCGACGCACGACCTGGACGCTGCGCTCGCGTGCGCAGCGCGGCTCGCCGACCTCGCGCCCGACAACGCGC TCGCGATGAACAACGTCGCGATGGCGATGAAGGAGGCGCAGCGCTGGGACGAGGCCGAGCGCCATGCGGCGCGCGCATGC GAGCTGGCGCCCGACGATGCGTCGTTCCGTTTCAATCTCGCGATCATCCAGCTCGTGCGCGGCAACCACGCGGCCGGCTG GCGCGGCCACGAGGCGCGCTGGGACGGCGCGGGCGAGTTGCGCGGCCGCCGGCCGGCGCTGCCGGGCCCGCGCTGGCAGG GCGAGCCGCTCGCCGGCAAGACGCTGCTGGTGTGGGGCGAGCAGGGGCTCGGCGACGTGCTGCAGTTCTGCCGCTTCGTC GTGCCGCTCGCCGAGCGCGTGCATCGCGAGGGCGGCCGGCTCGCGTGGAATACGTTTCCGGCGCTCGGCACGCTGATGCA GCGCAGCCTCGGTGCGCACGCGGACGTGTTCGGCGCGGGCGGCGGCATCGATGCGTTGCCGGCATTCGATTACGAAGTGC CGCTGATCGGCCTGCCGCTGATGCTCGGCATGGAGGCGTCGACGCTCGCCGCCTCGGTGCCGTACCTGCGGGCCGAGCCG GGTGCTCGCGACGCGTGGCGCGCGCGGCTCGCCCGCGACGGCCGGCTGAAGGTCGGGCTCGTGTGGACGGGCAGTGCGGG CCACCAGCGCAATCCGTTCCGGCGCGTCGGGCTCGAGCGCTACGCCGACGCGTTTCGCGGCATCGACGGCGTCACGTTCT ATTCGCTCCAGCCGGGTGCGGACACGGACGTCGCCGCCGCGCGCGCGGCCGGTTTCGCGATCGAGGACTACACGGCCGAA TTGACGAGTTTCGACGATACGGCCGCGTTCATCGGCGCGCTGGATCTCGTGATCACCGTGTGCACGTCGGTCGCGCATCT GGCCGGCGCGCTCGGCGCGCGCACCTGGGTGCTGCTCGACGTGAATCCGCACTGGCCGTGGCTGCTCGAGCGCCGGGACA GCCCGTGGTATCCGACCGCGACGTTGTACCGGCAGCCGACGTTCGGCGCGTGGGCGCCGGTGATGGAGGAAGTCAGCCGC GATCTGCGGCGCATCGCCGCGCAGCCGGAGCAACTGGGCCAACTGGACTAA
Upstream 100 bases:
>100_bases CGGGCAGGCCGCCGACGCGCAGGCGCGCGGCGAGCGCGCCGCGCACGATCTGTGGCTGGCCGCTGCGGCCCATCTGCATG CGGTCGATGCCGATGCGCTG
Downstream 100 bases:
>100_bases CTGGACCAATCGGACCGGCAGGCCTGAGCGGCCGGCCGGTTCGCGGTCACGGGCCGCCGCGCGCGGCGGCGGCCCGCTGC GTCATTTCGCTGCGTCGCCG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MRLTTTLVARQRPADALALAECAVRVQPGAATHFNHGYALQMAGRHADAVAPYRAALAIDAGWPSLRNNLAIALRLSGAD RAEEIALLDAAVKHDPRDVQAWINLVVARIATHDLDAALACAARLADLAPDNALAMNNVAMAMKEAQRWDEAERHAARAC ELAPDDASFRFNLAIIQLVRGNHAAGWRGHEARWDGAGELRGRRPALPGPRWQGEPLAGKTLLVWGEQGLGDVLQFCRFV VPLAERVHREGGRLAWNTFPALGTLMQRSLGAHADVFGAGGGIDALPAFDYEVPLIGLPLMLGMEASTLAASVPYLRAEP GARDAWRARLARDGRLKVGLVWTGSAGHQRNPFRRVGLERYADAFRGIDGVTFYSLQPGADTDVAAARAAGFAIEDYTAE LTSFDDTAAFIGALDLVITVCTSVAHLAGALGARTWVLLDVNPHWPWLLERRDSPWYPTATLYRQPTFGAWAPVMEEVSR DLRRIAAQPEQLGQLD
Sequences:
>Translated_496_residues MRLTTTLVARQRPADALALAECAVRVQPGAATHFNHGYALQMAGRHADAVAPYRAALAIDAGWPSLRNNLAIALRLSGAD RAEEIALLDAAVKHDPRDVQAWINLVVARIATHDLDAALACAARLADLAPDNALAMNNVAMAMKEAQRWDEAERHAARAC ELAPDDASFRFNLAIIQLVRGNHAAGWRGHEARWDGAGELRGRRPALPGPRWQGEPLAGKTLLVWGEQGLGDVLQFCRFV VPLAERVHREGGRLAWNTFPALGTLMQRSLGAHADVFGAGGGIDALPAFDYEVPLIGLPLMLGMEASTLAASVPYLRAEP GARDAWRARLARDGRLKVGLVWTGSAGHQRNPFRRVGLERYADAFRGIDGVTFYSLQPGADTDVAAARAAGFAIEDYTAE LTSFDDTAAFIGALDLVITVCTSVAHLAGALGARTWVLLDVNPHWPWLLERRDSPWYPTATLYRQPTFGAWAPVMEEVSR DLRRIAAQPEQLGQLD >Mature_496_residues MRLTTTLVARQRPADALALAECAVRVQPGAATHFNHGYALQMAGRHADAVAPYRAALAIDAGWPSLRNNLAIALRLSGAD RAEEIALLDAAVKHDPRDVQAWINLVVARIATHDLDAALACAARLADLAPDNALAMNNVAMAMKEAQRWDEAERHAARAC ELAPDDASFRFNLAIIQLVRGNHAAGWRGHEARWDGAGELRGRRPALPGPRWQGEPLAGKTLLVWGEQGLGDVLQFCRFV VPLAERVHREGGRLAWNTFPALGTLMQRSLGAHADVFGAGGGIDALPAFDYEVPLIGLPLMLGMEASTLAASVPYLRAEP GARDAWRARLARDGRLKVGLVWTGSAGHQRNPFRRVGLERYADAFRGIDGVTFYSLQPGADTDVAAARAAGFAIEDYTAE LTSFDDTAAFIGALDLVITVCTSVAHLAGALGARTWVLLDVNPHWPWLLERRDSPWYPTATLYRQPTFGAWAPVMEEVSR DLRRIAAQPEQLGQLD
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53784; Mature: 53784
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTTTLVARQRPADALALAECAVRVQPGAATHFNHGYALQMAGRHADAVAPYRAALAID CCCCHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE AGWPSLRNNLAIALRLSGADRAEEIALLDAAVKHDPRDVQAWINLVVARIATHDLDAALA CCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH CAARLADLAPDNALAMNNVAMAMKEAQRWDEAERHAARACELAPDDASFRFNLAIIQLVR HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEC GNHAAGWRGHEARWDGAGELRGRRPALPGPRWQGEPLAGKTLLVWGEQGLGDVLQFCRFV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH VPLAERVHREGGRLAWNTFPALGTLMQRSLGAHADVFGAGGGIDALPAFDYEVPLIGLPL HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHH MLGMEASTLAASVPYLRAEPGARDAWRARLARDGRLKVGLVWTGSAGHQRNPFRRVGLER HHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHH YADAFRGIDGVTFYSLQPGADTDVAAARAAGFAIEDYTAELTSFDDTAAFIGALDLVITV HHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHH CTSVAHLAGALGARTWVLLDVNPHWPWLLERRDSPWYPTATLYRQPTFGAWAPVMEEVSR HHHHHHHHHHHCCCEEEEEECCCCCCHHEECCCCCCCCCHHEEECCCCCHHHHHHHHHHH DLRRIAAQPEQLGQLD HHHHHHCCHHHHCCCC >Mature Secondary Structure MRLTTTLVARQRPADALALAECAVRVQPGAATHFNHGYALQMAGRHADAVAPYRAALAID CCCCHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE AGWPSLRNNLAIALRLSGADRAEEIALLDAAVKHDPRDVQAWINLVVARIATHDLDAALA CCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH CAARLADLAPDNALAMNNVAMAMKEAQRWDEAERHAARACELAPDDASFRFNLAIIQLVR HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEC GNHAAGWRGHEARWDGAGELRGRRPALPGPRWQGEPLAGKTLLVWGEQGLGDVLQFCRFV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH VPLAERVHREGGRLAWNTFPALGTLMQRSLGAHADVFGAGGGIDALPAFDYEVPLIGLPL HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHH MLGMEASTLAASVPYLRAEPGARDAWRARLARDGRLKVGLVWTGSAGHQRNPFRRVGLER HHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHH YADAFRGIDGVTFYSLQPGADTDVAAARAAGFAIEDYTAELTSFDDTAAFIGALDLVITV HHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHH CTSVAHLAGALGARTWVLLDVNPHWPWLLERRDSPWYPTATLYRQPTFGAWAPVMEEVSR HHHHHHHHHHHCCCEEEEEECCCCCCHHEECCCCCCCCCHHEEECCCCCHHHHHHHHHHH DLRRIAAQPEQLGQLD HHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]