| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is ybeZ [H]
Identifier: 116690714
GI number: 116690714
Start: 2983634
End: 2984680
Strand: Direct
Name: ybeZ [H]
Synonym: Bcen2424_2694
Alternate gene names: 116690714
Gene position: 2983634-2984680 (Clockwise)
Preceding gene: 116690713
Following gene: 116690715
Centisome position: 85.64
GC content: 69.72
Gene sequence:
>1047_bases TTGAAGACCGTCCAAGCACTGGAATTCACCGCCCCGCGCGATGACAACGCGCGCCTCGCCAACCTCTGCGGCCCGCTCGA CGAGAACCTGCGGCAGATCGAACAGGCGCTCGACGTCACGCTCGCGCGGCGCGGCCATCGGATCACGATCCGCGGGCGCG GCGCCAAGCTCGCGCTCGCCGCGCTCGAAAACTTCTACAACCGCGCGCGCGATCCGCTGTCGGTCGACGACATCCAGCTC GCGCTGGTCGAAGTGCGCCATACGGCCGGCAACGGCCGCCAGGACACGGTCGACGTGCGCTTTCGCGGCGATCCCGATCA TCCGTTCGACGAACCCGTCGCGCAGCTCGACGCCAGCGAGCCGGAGGAAGAGCCGGGGCCGAAGCTCTATACGCGGCGCG CCGACCTGCGCGGCCGCACGCCCGCCCAGCGCGAATACCTGAAGCAGATCCTGCAGCACGACGTGACGTTCGGCATCGGG CCGGCCGGCACCGGCAAGACCTACCTCGCGGTCGCGTGCGCGGTCGATGCGCTCGAGCGCGACCAGGTCAAGCGGATCGT GCTGACGCGCCCGGCCGTCGAGGCCGGCGAGCGGCTCGGCTTCCTGCCGGGCGATCTCGCGCAGAAGGTCGACCCGTACC TGCGGCCGCTGTACGACGCGCTGTACGACCTGCTCGGCTTCGACAAGACGGCCAAGATGTTCGAGCGCCAGATGATCGAG ATCGCGCCGCTCGCGTACATGCGCGGCCGCACGCTGAACCACGCGTTCATCATCCTCGACGAGGCGCAGAACACGACGCC CGAGCAGATGAAGATGTTCCTCACGCGGATCGGCTTCGGCTCGAAGGCGGTCGTGACCGGCGACACGAGCCAGGTCGACC TGCCGCGCGGCCACAAGAGCGGCCTCGTCGAGGCGCAGCAGGTGCTCGGCGGCGTGCGCGGCATCGCGCTCACGCGCTTC ACGAGCGCGGACGTGGTGCGCCATCCGCTCGTCGCGCGCATCGTCGAGGCGTACGACGAATTCCACGCGCAGCACCAGGA CGGCTGA
Upstream 100 bases:
>100_bases GTACCCGCACTCGCTGCGCGGCGAGCTCGTGCTCGTCAGCGACGACGCGAGCACGGCCACCCACTGACCGACTGACGCCC GACAGGAGCCCGACGCTACT
Downstream 100 bases:
>100_bases GCGGCGGCGCCTGCGCGCTGCCCCGGCCCGGCCCGCCAGACGGCGCGCCGGGCTTTTTTTTCGCCCGCACGCAGCCGGTC CGAATTCGGGCGCGATCGGC
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKTVQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLARRGHRITIRGRGAKLALAALENFYNRARDPLSVDDIQL ALVEVRHTAGNGRQDTVDVRFRGDPDHPFDEPVAQLDASEPEEEPGPKLYTRRADLRGRTPAQREYLKQILQHDVTFGIG PAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIE IAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKSGLVEAQQVLGGVRGIALTRF TSADVVRHPLVARIVEAYDEFHAQHQDG
Sequences:
>Translated_348_residues MKTVQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLARRGHRITIRGRGAKLALAALENFYNRARDPLSVDDIQL ALVEVRHTAGNGRQDTVDVRFRGDPDHPFDEPVAQLDASEPEEEPGPKLYTRRADLRGRTPAQREYLKQILQHDVTFGIG PAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIE IAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKSGLVEAQQVLGGVRGIALTRF TSADVVRHPLVARIVEAYDEFHAQHQDG >Mature_348_residues MKTVQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLARRGHRITIRGRGAKLALAALENFYNRARDPLSVDDIQL ALVEVRHTAGNGRQDTVDVRFRGDPDHPFDEPVAQLDASEPEEEPGPKLYTRRADLRGRTPAQREYLKQILQHDVTFGIG PAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIE IAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKSGLVEAQQVLGGVRGIALTRF TSADVVRHPLVARIVEAYDEFHAQHQDG
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=348, Percent_Identity=52.5862068965517, Blast_Score=326, Evalue=2e-90, Organism=Escherichia coli, GI1787257, Length=204, Percent_Identity=47.5490196078431, Blast_Score=182, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38697; Mature: 38697
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLARRGHRITIRGRGAKLALA CCCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH ALENFYNRARDPLSVDDIQLALVEVRHTAGNGRQDTVDVRFRGDPDHPFDEPVAQLDASE HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCC PEEEPGPKLYTRRADLRGRTPAQREYLKQILQHDVTFGIGPAGTGKTYLAVACAVDALER CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH DQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIE HHHHHHHHCCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKS HHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC GLVEAQQVLGGVRGIALTRFTSADVVRHPLVARIVEAYDEFHAQHQDG HHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTVQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLARRGHRITIRGRGAKLALA CCCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH ALENFYNRARDPLSVDDIQLALVEVRHTAGNGRQDTVDVRFRGDPDHPFDEPVAQLDASE HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCC PEEEPGPKLYTRRADLRGRTPAQREYLKQILQHDVTFGIGPAGTGKTYLAVACAVDALER CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH DQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIE HHHHHHHHCCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKS HHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC GLVEAQQVLGGVRGIALTRFTSADVVRHPLVARIVEAYDEFHAQHQDG HHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]