| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690709
Identifier: 116690709
GI number: 116690709
Start: 2978443
End: 2978715
Strand: Reverse
Name: 116690709
Synonym: Bcen2424_2689
Alternate gene names: NA
Gene position: 2978715-2978443 (Counterclockwise)
Preceding gene: 116690710
Following gene: 116690708
Centisome position: 85.5
GC content: 64.84
Gene sequence:
>273_bases TTGTATGCTTGGCCCGCCGGTGACGGGGCGTTCCCGTCCGGCAATCAGTGCGTCTTCAGGGCGGGGCGAAATTCCCCACC GGCGGTAGGCTGGCGTAAGCCGGCGAGCCCGCGAGCGCCCGCGCATCCGCGCGGGGTCAGCAGATCTGGTCGAATGCCAG AGCCGACGGTCACAGTCCGGATGAGAGAAGATGTGCAGATAGTCATGTCCGTCAGGGCCGCTTCGCGCTGCATGCGAAGC GGGTTGTCGTTCTGTCTGTTTGCAATGCCCTGA
Upstream 100 bases:
>100_bases GCGGGATCGCGGGATCGCCCGCCGGCCGTTCGGGCGATCCGGTTAGACAGGGTCGTCAGTAAGGTTTTACCGGTAGTTGG CTGCGCGTCGCGCGCGGCTG
Downstream 100 bases:
>100_bases AACGTTTTTCGCCCTAATCGTATTTGCGAGGAGCGTTTCACATGTCCTTGATGTCCGTTTCGTCGGCGCCTGCCGACGCC TTTGCCGATCTCCCCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MYAWPAGDGAFPSGNQCVFRAGRNSPPAVGWRKPASPRAPAHPRGVSRSGRMPEPTVTVRMREDVQIVMSVRAASRCMRS GLSFCLFAMP
Sequences:
>Translated_90_residues MYAWPAGDGAFPSGNQCVFRAGRNSPPAVGWRKPASPRAPAHPRGVSRSGRMPEPTVTVRMREDVQIVMSVRAASRCMRS GLSFCLFAMP >Mature_90_residues MYAWPAGDGAFPSGNQCVFRAGRNSPPAVGWRKPASPRAPAHPRGVSRSGRMPEPTVTVRMREDVQIVMSVRAASRCMRS GLSFCLFAMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9776; Mature: 9776
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAWPAGDGAFPSGNQCVFRAGRNSPPAVGWRKPASPRAPAHPRGVSRSGRMPEPTVTVR CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE MREDVQIVMSVRAASRCMRSGLSFCLFAMP ECCCHHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MYAWPAGDGAFPSGNQCVFRAGRNSPPAVGWRKPASPRAPAHPRGVSRSGRMPEPTVTVR CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE MREDVQIVMSVRAASRCMRSGLSFCLFAMP ECCCHHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA