| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is rhlE [H]
Identifier: 116690690
GI number: 116690690
Start: 2958813
End: 2960273
Strand: Direct
Name: rhlE [H]
Synonym: Bcen2424_2670
Alternate gene names: 116690690
Gene position: 2958813-2960273 (Clockwise)
Preceding gene: 116690689
Following gene: 116690694
Centisome position: 84.93
GC content: 68.93
Gene sequence:
>1461_bases ATGTCTTTCGAATCTCTCGGCCTGGCCGAACCGCTGGTCAAGGCGGTCAACGAGCTCGGCTATACGTCGCCGACTCCGAT CCAGCAGCAGGCGATCCCGGCCGTCCTCGGCGGCGGCGACCTGCTCGCCGGCGCACAAACCGGCACCGGCAAGACCGCCG GCTTCACGCTGCCGATCCTGCAACGCCTGCACACGTTCTACGCCGAGCACCGTGGCGCGAAGCGCGCGGTGCGCGCGCTG ATCCTCACGCCGACGCGCGAACTCGCCGCCCAGGTCGAGGAAAGCGTCCGTGCGTACAGCAAGTACCTGAAGCTGCGCTC GACCGTGATGTTCGGCGGCGTCAGCATCAATCCGCAGATCGATGCGCTCAAGCGCGGCGTCGACATCGTCGTCGCGACGC CGGGCCGCCTGCTCGACCACATGCAGCAGAAGACCATCGACCTGTCGGATCTCGACATCCTCGTGCTCGACGAAGCCGAC CGGATGCTCGACATGGGCTTCATCCACGACATCAAGCGGGTGCTCGCGAAGCTGCCGCCGCAGCGTCAGAACCTGCTGTT CTCGGCGACCTTCTCGGATGAAATCAAGGCGCTCGCCGACAGCCTGCTCGACTCGCCCGCGCTGATCGAGGTCGCCCGCC GCAACACGACCGCCGAGAGCGTCGCGCAGAAGATCCACCCGGTCGACCGCGACCGCAAGCGCGAGCTGCTCACGCACCTG ATCCGCGAACACAACTGGTTCCAGGTGCTCGTGTTCACGCGCACCAAGCACGGCGCGAACCGGCTCGCCGAGCAGTTGAC GAAGGACGGCATCAGCGCGATGGCGATCCACGGCAACAAGAGCCAGTCGGCCCGCACGCGCGCGCTGGCCGAGTTCAAGA ACAGCACGCTGCAGGTGCTCGTCGCGACCGACATCGCCGCGCGCGGGATCGACATCGACCAGCTGCCGCACGTCGTCAAC TTCGATCTGCCGAACGTGCCCGAGGATTACGTGCACCGCATCGGCCGCACGGGCCGCGCGGGCGCGACCGGCGAAGCCGT GTCGCTCGTGTGCGTCGACGAGAAGCAGTTGCTGCGCGACATCGAGCGGCTGATCAAGCGCGAGATCCCGCAGGAAGTGA TCGCGGGCTTCGAACCCGATCCGAACGCGAAGCCGGAGCCGATCCAGCAACGCCGCGGGCAGCAGCAACCGCGCGGCGGT GGCAGTGGTGGCGGCAATCGCCAGCCGCGTGCCGGCGGCTCAGGCCAGCCGGCCGCGAAACGCGACGGCAACGCGCAACC GAAGGCCGGGCAACCGAAGGCTGCAGCGCAGCAGAAGGCCGCGAAGCCGCGCACGCAAGGCGGCGCCGCCGGCAACGGCG GACGTCCGGCAGGTGGCGGCAACGGCGCCCGCCCGGCAAGCGGCAACGCCGCGCATCCGAACCGCAACCGTTCGTCGCGC AGCGGCCAGCGCGGTCACTGA
Upstream 100 bases:
>100_bases CCGCGGCCGCGCCCTTTTGCTTTTTGGCTGTTTAGCGATGCAGGTTTGCCGCGCGGGCCGCGCGCTGCATCGCCGATCAT AAAACTCAAGAGTGGTATCT
Downstream 100 bases:
>100_bases AGCCGCGCGGCCGCGCGCCGCAGGTGCTCGATCTGGCGTTGCCAGCGTGCGAGCACCGCGGCGCGCTCCCCTTCCAGCGT GAACGTGACGCCGGTCGCGA
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPILQRLHTFYAEHRGAKRAVRAL ILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEAD RMLDMGFIHDIKRVLAKLPPQRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHL IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNSTLQVLVATDIAARGIDIDQLPHVVN FDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRDIERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQQPRGG GSGGGNRQPRAGGSGQPAAKRDGNAQPKAGQPKAAAQQKAAKPRTQGGAAGNGGRPAGGGNGARPASGNAAHPNRNRSSR SGQRGH
Sequences:
>Translated_486_residues MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPILQRLHTFYAEHRGAKRAVRAL ILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEAD RMLDMGFIHDIKRVLAKLPPQRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHL IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNSTLQVLVATDIAARGIDIDQLPHVVN FDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRDIERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQQPRGG GSGGGNRQPRAGGSGQPAAKRDGNAQPKAGQPKAAAQQKAAKPRTQGGAAGNGGRPAGGGNGARPASGNAAHPNRNRSSR SGQRGH >Mature_485_residues SFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPILQRLHTFYAEHRGAKRAVRALI LTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADR MLDMGFIHDIKRVLAKLPPQRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHLI REHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNSTLQVLVATDIAARGIDIDQLPHVVNF DLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRDIERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQQPRGGG SGGGNRQPRAGGSGQPAAKRDGNAQPKAGQPKAAAQQKAAKPRTQGGAAGNGGRPAGGGNGARPASGNAAHPNRNRSSRS GQRGH
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=391, Percent_Identity=41.4322250639386, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI169881239, Length=388, Percent_Identity=41.7525773195876, Blast_Score=285, Evalue=7e-77, Organism=Homo sapiens, GI13514809, Length=388, Percent_Identity=41.7525773195876, Blast_Score=285, Evalue=7e-77, Organism=Homo sapiens, GI301171467, Length=393, Percent_Identity=41.2213740458015, Blast_Score=285, Evalue=7e-77, Organism=Homo sapiens, GI87196351, Length=393, Percent_Identity=41.2213740458015, Blast_Score=284, Evalue=1e-76, Organism=Homo sapiens, GI301171475, Length=393, Percent_Identity=41.2213740458015, Blast_Score=284, Evalue=1e-76, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=41.4565826330532, Blast_Score=269, Evalue=4e-72, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=41.4565826330532, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=41.4565826330532, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=41.4565826330532, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI31542656, Length=377, Percent_Identity=38.9920424403183, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI222352149, Length=372, Percent_Identity=38.7096774193548, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI20149629, Length=370, Percent_Identity=37.8378378378378, Blast_Score=258, Evalue=8e-69, Organism=Homo sapiens, GI4758138, Length=370, Percent_Identity=36.4864864864865, Blast_Score=258, Evalue=9e-69, Organism=Homo sapiens, GI55749865, Length=372, Percent_Identity=37.3655913978495, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI148613856, Length=355, Percent_Identity=38.8732394366197, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI38201710, Length=355, Percent_Identity=38.8732394366197, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI21071032, Length=383, Percent_Identity=37.8590078328982, Blast_Score=254, Evalue=9e-68, Organism=Homo sapiens, GI41327773, Length=364, Percent_Identity=38.1868131868132, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI45446747, Length=368, Percent_Identity=36.9565217391304, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI45446743, Length=368, Percent_Identity=36.9565217391304, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI164419743, Length=371, Percent_Identity=38.0053908355795, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI51094101, Length=371, Percent_Identity=38.0053908355795, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI41327771, Length=392, Percent_Identity=35.969387755102, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=35.5795148247978, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI188035877, Length=370, Percent_Identity=38.1081081081081, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI164664518, Length=370, Percent_Identity=34.5945945945946, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI41327776, Length=370, Percent_Identity=34.5945945945946, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=34.1397849462366, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI13514831, Length=373, Percent_Identity=34.3163538873995, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI83700235, Length=377, Percent_Identity=34.2175066312997, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI50659095, Length=377, Percent_Identity=35.2785145888594, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI38327634, Length=362, Percent_Identity=34.8066298342541, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI41327779, Length=369, Percent_Identity=37.3983739837398, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI38569505, Length=377, Percent_Identity=33.6870026525199, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI38569503, Length=377, Percent_Identity=33.6870026525199, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=32.6683291770574, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI21040371, Length=384, Percent_Identity=30.7291666666667, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI4758112, Length=380, Percent_Identity=31.0526315789474, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI18375623, Length=380, Percent_Identity=31.0526315789474, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI13129006, Length=377, Percent_Identity=34.2175066312997, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI17505907, Length=414, Percent_Identity=31.1594202898551, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI8922886, Length=382, Percent_Identity=34.5549738219895, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI6005743, Length=382, Percent_Identity=34.2931937172775, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI164419732, Length=371, Percent_Identity=32.8840970350404, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI256223453, Length=393, Percent_Identity=30.5343511450382, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI62241022, Length=365, Percent_Identity=33.972602739726, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI4826686, Length=424, Percent_Identity=29.7169811320755, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI154759257, Length=417, Percent_Identity=30.6954436450839, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI62241024, Length=342, Percent_Identity=34.2105263157895, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI9966805, Length=328, Percent_Identity=32.6219512195122, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI256773275, Length=377, Percent_Identity=30.7692307692308, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI20336298, Length=356, Percent_Identity=30.3370786516854, Blast_Score=137, Evalue=2e-32, Organism=Escherichia coli, GI1787016, Length=389, Percent_Identity=71.2082262210797, Blast_Score=558, Evalue=1e-160, Organism=Escherichia coli, GI87082221, Length=371, Percent_Identity=42.3180592991914, Blast_Score=303, Evalue=2e-83, Organism=Escherichia coli, GI1790214, Length=405, Percent_Identity=38.5185185185185, Blast_Score=264, Evalue=1e-71, Organism=Escherichia coli, GI1787605, Length=357, Percent_Identity=40.8963585434174, Blast_Score=248, Evalue=4e-67, Organism=Escherichia coli, GI1788930, Length=378, Percent_Identity=41.2698412698413, Blast_Score=242, Evalue=3e-65, Organism=Escherichia coli, GI48994977, Length=375, Percent_Identity=24.5333333333333, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17510309, Length=397, Percent_Identity=39.2947103274559, Blast_Score=274, Evalue=9e-74, Organism=Caenorhabditis elegans, GI17510307, Length=397, Percent_Identity=39.2947103274559, Blast_Score=274, Evalue=9e-74, Organism=Caenorhabditis elegans, GI71995514, Length=397, Percent_Identity=39.2947103274559, Blast_Score=274, Evalue=1e-73, Organism=Caenorhabditis elegans, GI115533224, Length=419, Percent_Identity=38.4248210023866, Blast_Score=271, Evalue=7e-73, Organism=Caenorhabditis elegans, GI32565321, Length=391, Percent_Identity=37.3401534526854, Blast_Score=267, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17510559, Length=424, Percent_Identity=36.7924528301887, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI17555296, Length=362, Percent_Identity=38.6740331491713, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI71995718, Length=387, Percent_Identity=39.0180878552972, Blast_Score=255, Evalue=3e-68, Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=36.6576819407008, Blast_Score=250, Evalue=9e-67, Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=36.3881401617251, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17537549, Length=386, Percent_Identity=36.2694300518135, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI86570094, Length=354, Percent_Identity=38.4180790960452, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=35.3099730458221, Blast_Score=236, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=34.6354166666667, Blast_Score=231, Evalue=7e-61, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=36.1930294906166, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17507945, Length=400, Percent_Identity=36.75, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17552114, Length=381, Percent_Identity=33.5958005249344, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI71999644, Length=361, Percent_Identity=34.3490304709141, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17507881, Length=385, Percent_Identity=35.3246753246753, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI71999646, Length=361, Percent_Identity=34.3490304709141, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17552642, Length=432, Percent_Identity=34.2592592592593, Blast_Score=219, Evalue=4e-57, Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=33.7730870712401, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI115532546, Length=377, Percent_Identity=33.9522546419098, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17509811, Length=377, Percent_Identity=32.3607427055703, Blast_Score=207, Evalue=7e-54, Organism=Caenorhabditis elegans, GI71990816, Length=381, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17505370, Length=359, Percent_Identity=35.933147632312, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI193208216, Length=408, Percent_Identity=31.3725490196078, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71982858, Length=352, Percent_Identity=30.1136363636364, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI193206561, Length=362, Percent_Identity=32.3204419889503, Blast_Score=177, Evalue=9e-45, Organism=Caenorhabditis elegans, GI17508543, Length=392, Percent_Identity=29.0816326530612, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17536103, Length=397, Percent_Identity=29.9748110831234, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17536101, Length=377, Percent_Identity=30.7692307692308, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17536099, Length=377, Percent_Identity=30.7692307692308, Blast_Score=162, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17556951, Length=357, Percent_Identity=32.4929971988796, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17507641, Length=389, Percent_Identity=31.8766066838046, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI32564046, Length=410, Percent_Identity=31.4634146341463, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI25148203, Length=427, Percent_Identity=25.2927400468384, Blast_Score=145, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17553716, Length=359, Percent_Identity=28.133704735376, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI25148291, Length=326, Percent_Identity=27.3006134969325, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI71997889, Length=479, Percent_Identity=25.8872651356994, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI71982862, Length=210, Percent_Identity=30.4761904761905, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI25148205, Length=363, Percent_Identity=24.2424242424242, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71987152, Length=106, Percent_Identity=37.7358490566038, Blast_Score=89, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6325138, Length=390, Percent_Identity=41.2820512820513, Blast_Score=285, Evalue=1e-77, Organism=Saccharomyces cerevisiae, GI6324778, Length=387, Percent_Identity=38.7596899224806, Blast_Score=267, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6324217, Length=380, Percent_Identity=38.9473684210526, Blast_Score=265, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6321856, Length=375, Percent_Identity=39.7333333333333, Blast_Score=262, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6321360, Length=365, Percent_Identity=39.1780821917808, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=39.2265193370166, Blast_Score=243, Evalue=5e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=402, Percent_Identity=34.8258706467662, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=33.3333333333333, Blast_Score=237, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6323947, Length=387, Percent_Identity=34.3669250645995, Blast_Score=230, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6322427, Length=378, Percent_Identity=34.3915343915344, Blast_Score=209, Evalue=7e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=34.0540540540541, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=34.0540540540541, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=381, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=8e-54, Organism=Saccharomyces cerevisiae, GI6319714, Length=380, Percent_Identity=31.8421052631579, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6320119, Length=387, Percent_Identity=32.5581395348837, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=388, Percent_Identity=33.5051546391753, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=360, Percent_Identity=35, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=30.8108108108108, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320400, Length=418, Percent_Identity=29.6650717703349, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=417, Percent_Identity=29.2565947242206, Blast_Score=163, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=454, Percent_Identity=27.5330396475771, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6321267, Length=363, Percent_Identity=29.7520661157025, Blast_Score=156, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6320173, Length=220, Percent_Identity=36.3636363636364, Blast_Score=155, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6324366, Length=383, Percent_Identity=27.4151436031332, Blast_Score=126, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6322876, Length=229, Percent_Identity=32.7510917030568, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=191, Percent_Identity=30.3664921465969, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=41.7613636363636, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI17985987, Length=391, Percent_Identity=40.153452685422, Blast_Score=274, Evalue=1e-73, Organism=Drosophila melanogaster, GI21355075, Length=381, Percent_Identity=37.7952755905512, Blast_Score=271, Evalue=7e-73, Organism=Drosophila melanogaster, GI21356161, Length=385, Percent_Identity=40, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI18857967, Length=377, Percent_Identity=37.1352785145889, Blast_Score=262, Evalue=4e-70, Organism=Drosophila melanogaster, GI28574962, Length=370, Percent_Identity=37.027027027027, Blast_Score=258, Evalue=5e-69, Organism=Drosophila melanogaster, GI17977678, Length=380, Percent_Identity=38.1578947368421, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24585582, Length=413, Percent_Identity=35.8353510895884, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24642151, Length=366, Percent_Identity=37.431693989071, Blast_Score=255, Evalue=5e-68, Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=38.1471389645777, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24584994, Length=391, Percent_Identity=35.5498721227622, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=36.8563685636856, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24644479, Length=376, Percent_Identity=36.436170212766, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24644487, Length=376, Percent_Identity=36.436170212766, Blast_Score=248, Evalue=9e-66, Organism=Drosophila melanogaster, GI45551833, Length=376, Percent_Identity=36.436170212766, Blast_Score=248, Evalue=9e-66, Organism=Drosophila melanogaster, GI24644485, Length=376, Percent_Identity=36.436170212766, Blast_Score=248, Evalue=9e-66, Organism=Drosophila melanogaster, GI281361218, Length=376, Percent_Identity=36.436170212766, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24644481, Length=376, Percent_Identity=36.436170212766, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24644483, Length=376, Percent_Identity=36.436170212766, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=36.1185983827493, Blast_Score=241, Evalue=6e-64, Organism=Drosophila melanogaster, GI24583281, Length=367, Percent_Identity=35.4223433242507, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI24583279, Length=367, Percent_Identity=35.4223433242507, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI17136814, Length=401, Percent_Identity=37.9052369077307, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=34.5013477088949, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=34.5013477088949, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=34.5013477088949, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=34.5013477088949, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=36.3057324840764, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI28571808, Length=368, Percent_Identity=32.6086956521739, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI28571809, Length=368, Percent_Identity=32.6086956521739, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI21355559, Length=363, Percent_Identity=33.8842975206612, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI24666101, Length=356, Percent_Identity=34.8314606741573, Blast_Score=181, Evalue=9e-46, Organism=Drosophila melanogaster, GI24581954, Length=352, Percent_Identity=30.9659090909091, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581952, Length=352, Percent_Identity=30.9659090909091, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581956, Length=352, Percent_Identity=30.9659090909091, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24642822, Length=377, Percent_Identity=30.2387267904509, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI17647335, Length=398, Percent_Identity=28.894472361809, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=28.1012658227848, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=31.2121212121212, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI20130173, Length=307, Percent_Identity=31.9218241042345, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI24640164, Length=387, Percent_Identity=26.8733850129199, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI19920478, Length=402, Percent_Identity=29.1044776119403, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI17136666, Length=423, Percent_Identity=27.4231678486998, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI28571338, Length=220, Percent_Identity=34.5454545454545, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI18859659, Length=220, Percent_Identity=34.5454545454545, Blast_Score=122, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 52359; Mature: 52228
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCCCEEECCCCCCCCCCCCHHHHH QRLHTFYAEHRGAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEECCCHH DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP HHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC QRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHL CHHCEEEEECHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNSTLQVL HHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEE VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD EEEHHHHCCCCHHHCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHH IERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQQPRGGGSGGGNRQPRAGGSGQPAAK HHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RDGNAQPKAGQPKAAAQQKAAKPRTQGGAAGNGGRPAGGGNGARPASGNAAHPNRNRSSR CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGQRGH CCCCCC >Mature Secondary Structure SFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL CCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCCCEEECCCCCCCCCCCCHHHHH QRLHTFYAEHRGAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEECCCHH DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP HHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC QRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHL CHHCEEEEECHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNSTLQVL HHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEE VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD EEEHHHHCCCCHHHCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHH IERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQQPRGGGSGGGNRQPRAGGSGQPAAK HHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RDGNAQPKAGQPKAAAQQKAAKPRTQGGAAGNGGRPAGGGNGARPASGNAAHPNRNRSSR CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGQRGH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]