| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is proP [H]
Identifier: 116690675
GI number: 116690675
Start: 2941838
End: 2943496
Strand: Direct
Name: proP [H]
Synonym: Bcen2424_2655
Alternate gene names: 116690675
Gene position: 2941838-2943496 (Clockwise)
Preceding gene: 116690674
Following gene: 116690678
Centisome position: 84.44
GC content: 65.58
Gene sequence:
>1659_bases ATGGCAACGTTAGGCGGGCAAATTTCGCACTCGCCGATGACGGGCGAAGAGAAGAAGGTGATCTTCGCGTCGTCGCTCGG CACCGTGTTCGAGTGGTACGACTTTTACCTGGCCGGCTCGCTCGCGGCCTACATCAGCAAGAGCTTCTTCTCCGGCGTCA ATCCGACCGCCGCGTTCATCTTCACGCTGCTCGGCTTCGCCGCCGGCTTCGCGGTGCGGCCGTTCGGCGCGATCGTCTTC GGCCGGCTCGGCGACCTCGTCGGCCGCAAGCACACGTTCCTCGTGACGATCGTGATCATGGGCGTCTCGACGTTCGTGGT CGGCTTCCTCCCGGGCTACGCGTCGATCGGCATCGCCGCCCCCGTGATCTTCATCGCGATGCGGCTGTTGCAGGGCCTCG CGCTCGGCGGCGAGTACGGCGGCGCGGCGACCTACGTCGCCGAGCATGCGCCGGCCAACCGGCGCGGCTTCTACACCGCC TGGATCCAGACGACGGCCACGCTCGGCCTGTTCCTGTCGCTGCTCGTGATCCTGGGCGTGCGCACGTTCATCGGCGAGGA AGCGTTCGGCAACTGGGGCTGGCGCGTGCCGTTCGTCGCATCGATCCTGCTGCTCGGGGTGTCGGTGTGGATCCGGCTGC AACTGAACGAATCGCCGGTGTTCCTGCGCATCAAGGCGGAAGGCAAGACGTCGAAGGCGCCGCTGACCGAAGCGTTCGGC CAGTGGAAGAACCTGAAGATCGTGATCCTCGCGCTGATCGGCCTGACGGCCGGCCAGGCGGTCGTGTGGTACACGGGCCA GTTCTACGCGCTGTTCTTCCTCACGCAGACGCTGAAGGTCGACGGCGCCAGCGCGAACATCCTGATCGCGATCGCGCTCC TGATCGGCACGCCGTTCTTCCTGTTCTTCGGCTCGCTGTCGGACAAGATCGGCCGCAAGCCGATCATCCTTGCCGGCTGC CTGATCGCCGCGCTGACCTACTTCCCGCTGTTCAAGGCGCTCACGCACTACGCGAACCCGCAGCTCGAACTCGCGACGCA GAAGGCGCCGATCACGGTCGTCGCCGATCCGGCTACCTGCTCGTTCCAGTTCAACCCGGTGGGCACGTCGAAGTTCACCA CCTCGTGCGACATCGCGAAGAGCGCGCTCGCGAAGGCCGGCCTGAACTACGAGAACGTCGCGGCGCCGGCCGGCACGCTG GCCGAAATCAAGGTCGGCGACACGGTGATCCAGACCTACGACGGCAAGGCGGCCGACGCGAAGGCGCAGGGCGCGGCGTT CGACAAGACCCTCGCGTCGACGCTGAAGGGGGCCGGCTACCCGGCGAAGGCCGACCCGGCGCAACTCAACTGGCCGATGA CGATCGTGATCCTGACGATCCTCGTGATCTTCGTGACGATGGTCTACGGCCCGATCGCCGCGATGCTGGTCGAGATGTTC CCGACGCGAATCCGCTACACGTCGATGTCGCTGCCCTATCACATCGGCAACGGCTGGTTCGGCGGCTTCCTGCCGGCAAC TGCGTTCGCGATCGTCGCGGCGAAGGGCAACATCTACTCGGGGCTCTGGTATCCGATCGTGATCGCGCTGGCCACGTTCG TGATCGGCCTGCTGTTCGTCAAGGAGACGAAGGACTCGGACATCTACGCGCAGGATTGA
Upstream 100 bases:
>100_bases GCAAGTCAGTGCGCCGTAAGTTTCCGTGCCAATAATCGTCGACAGGCCCGCCCCTCCCAAGGCGGCCGCACATCTATATC AAGGGACTTGGAGACGATTC
Downstream 100 bases:
>100_bases TGTCGGGTCCGCGGCGGGGGAGGGCCGACGGAGGATCGCCTTCCGGCGCCCGGCTCCCGCCCGCGATGGAGGCCGGCACG GACCGTCGGCAACTTTTTTC
Product: major facilitator transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MATLGGQISHSPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVF GRLGDLVGRKHTFLVTIVIMGVSTFVVGFLPGYASIGIAAPVIFIAMRLLQGLALGGEYGGAATYVAEHAPANRRGFYTA WIQTTATLGLFLSLLVILGVRTFIGEEAFGNWGWRVPFVASILLLGVSVWIRLQLNESPVFLRIKAEGKTSKAPLTEAFG QWKNLKIVILALIGLTAGQAVVWYTGQFYALFFLTQTLKVDGASANILIAIALLIGTPFFLFFGSLSDKIGRKPIILAGC LIAALTYFPLFKALTHYANPQLELATQKAPITVVADPATCSFQFNPVGTSKFTTSCDIAKSALAKAGLNYENVAAPAGTL AEIKVGDTVIQTYDGKAADAKAQGAAFDKTLASTLKGAGYPAKADPAQLNWPMTIVILTILVIFVTMVYGPIAAMLVEMF PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGNIYSGLWYPIVIALATFVIGLLFVKETKDSDIYAQD
Sequences:
>Translated_552_residues MATLGGQISHSPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVF GRLGDLVGRKHTFLVTIVIMGVSTFVVGFLPGYASIGIAAPVIFIAMRLLQGLALGGEYGGAATYVAEHAPANRRGFYTA WIQTTATLGLFLSLLVILGVRTFIGEEAFGNWGWRVPFVASILLLGVSVWIRLQLNESPVFLRIKAEGKTSKAPLTEAFG QWKNLKIVILALIGLTAGQAVVWYTGQFYALFFLTQTLKVDGASANILIAIALLIGTPFFLFFGSLSDKIGRKPIILAGC LIAALTYFPLFKALTHYANPQLELATQKAPITVVADPATCSFQFNPVGTSKFTTSCDIAKSALAKAGLNYENVAAPAGTL AEIKVGDTVIQTYDGKAADAKAQGAAFDKTLASTLKGAGYPAKADPAQLNWPMTIVILTILVIFVTMVYGPIAAMLVEMF PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGNIYSGLWYPIVIALATFVIGLLFVKETKDSDIYAQD >Mature_551_residues ATLGGQISHSPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVFG RLGDLVGRKHTFLVTIVIMGVSTFVVGFLPGYASIGIAAPVIFIAMRLLQGLALGGEYGGAATYVAEHAPANRRGFYTAW IQTTATLGLFLSLLVILGVRTFIGEEAFGNWGWRVPFVASILLLGVSVWIRLQLNESPVFLRIKAEGKTSKAPLTEAFGQ WKNLKIVILALIGLTAGQAVVWYTGQFYALFFLTQTLKVDGASANILIAIALLIGTPFFLFFGSLSDKIGRKPIILAGCL IAALTYFPLFKALTHYANPQLELATQKAPITVVADPATCSFQFNPVGTSKFTTSCDIAKSALAKAGLNYENVAAPAGTLA EIKVGDTVIQTYDGKAADAKAQGAAFDKTLASTLKGAGYPAKADPAQLNWPMTIVILTILVIFVTMVYGPIAAMLVEMFP TRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGNIYSGLWYPIVIALATFVIGLLFVKETKDSDIYAQD
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=328, Percent_Identity=35.3658536585366, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1788292, Length=338, Percent_Identity=33.4319526627219, Blast_Score=183, Evalue=3e-47, Organism=Escherichia coli, GI1788942, Length=339, Percent_Identity=33.9233038348083, Blast_Score=166, Evalue=4e-42, Organism=Escherichia coli, GI1789941, Length=220, Percent_Identity=42.2727272727273, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI87082231, Length=226, Percent_Identity=26.5486725663717, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87082404, Length=317, Percent_Identity=25.5520504731861, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 59045; Mature: 58914
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLGGQISHSPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFI CCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FTLLGFAAGFAVRPFGAIVFGRLGDLVGRKHTFLVTIVIMGVSTFVVGFLPGYASIGIAA HHHHHHHHCCHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH PVIFIAMRLLQGLALGGEYGGAATYVAEHAPANRRGFYTAWIQTTATLGLFLSLLVILGV HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH RTFIGEEAFGNWGWRVPFVASILLLGVSVWIRLQLNESPVFLRIKAEGKTSKAPLTEAFG HHHHCCHHCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHC QWKNLKIVILALIGLTAGQAVVWYTGQFYALFFLTQTLKVDGASANILIAIALLIGTPFF CCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCHHH LFFGSLSDKIGRKPIILAGCLIAALTYFPLFKALTHYANPQLELATQKAPITVVADPATC HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCEE SFQFNPVGTSKFTTSCDIAKSALAKAGLNYENVAAPAGTLAEIKVGDTVIQTYDGKAADA EEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCEEEEECCCCCCCC KAQGAAFDKTLASTLKGAGYPAKADPAQLNWPMTIVILTILVIFVTMVYGPIAAMLVEMF CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGNIYSGLWYPIVIALATFVIGLLFV CHHEEEEEECCCEEECCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHH KETKDSDIYAQD CCCCCCCCEECC >Mature Secondary Structure ATLGGQISHSPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFI CCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FTLLGFAAGFAVRPFGAIVFGRLGDLVGRKHTFLVTIVIMGVSTFVVGFLPGYASIGIAA HHHHHHHHCCHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH PVIFIAMRLLQGLALGGEYGGAATYVAEHAPANRRGFYTAWIQTTATLGLFLSLLVILGV HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH RTFIGEEAFGNWGWRVPFVASILLLGVSVWIRLQLNESPVFLRIKAEGKTSKAPLTEAFG HHHHCCHHCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHC QWKNLKIVILALIGLTAGQAVVWYTGQFYALFFLTQTLKVDGASANILIAIALLIGTPFF CCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCHHH LFFGSLSDKIGRKPIILAGCLIAALTYFPLFKALTHYANPQLELATQKAPITVVADPATC HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCEE SFQFNPVGTSKFTTSCDIAKSALAKAGLNYENVAAPAGTLAEIKVGDTVIQTYDGKAADA EEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCEEEEECCCCCCCC KAQGAAFDKTLASTLKGAGYPAKADPAQLNWPMTIVILTILVIFVTMVYGPIAAMLVEMF CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGNIYSGLWYPIVIALATFVIGLLFV CHHEEEEEECCCEEECCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHH KETKDSDIYAQD CCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]