Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690663

Identifier: 116690663

GI number: 116690663

Start: 2928619

End: 2929818

Strand: Direct

Name: 116690663

Synonym: Bcen2424_2643

Alternate gene names: NA

Gene position: 2928619-2929818 (Clockwise)

Preceding gene: 116690662

Following gene: 116690673

Centisome position: 84.06

GC content: 69.75

Gene sequence:

>1200_bases
ATGAATAAATCACCGCGTCGCGCCGCACTCGCGCTATGCGTTGCCACATCGCCCGCCGCCTTCGCCGCCAGCCCCTGCCC
CGCCGCCGACACCGCTGCACGCGCCGCGCTCGACGCGCAACACCGCGTGCAACGCGCGCCCAACCCGGAAAGCGACGGCG
CCGGCACCGTCGAGGTTTCGCCGCCTTTGCGCGACGCGCTTCGCGCCTACAAGCAAGCGCTCGTCGGCGCGATCGACGCG
CGCCTCGTATGCAGCGATGAACATGTCGAAGCGGTCGCACTGAAACGCACGCTCGCGGCAACGCTCGGCGTCCCCGCGCA
GCCGGCACAGCCGAAAACCGGCGAATCGGCGTTCGGCCGCAACCCGGACGTCGACGTCACGCGCGACGGCACGTCGCGCC
CGCTGCTGTTCGTACGCGCCGGCTTCGACATCGCATGCGGCGACGACAACCTGCTCACCGCGTACGCGTGGGAAAACGGT
CGGTGGCAGCGCGTGCTGCGCTGGCAAGCCGACGAATACAAGGACATCGGCGGCGCATACGGCGGCGGCTTCTGGTTCGG
CGCGTTGCCGGGCGGACAGGTGGCGGTCGTCCACGGCACACCGTGGTGCTCGTCGCGCTGGAGCCGGTTCGGCGCGGACG
TGATCGCGCCGGCCAACGGGTCGGCCGCGCAACGCACGCTGTTCCACACCGCGCACGGCTACGTGATCGACGACGATTCG
ATCCGCTTCAAGGTGCGCGCCGACGGCTTCGAGCTGCGCACGACGGTCGGCTCGCTCGACGGCGACGTGATGACGCGGCC
AGGTATCTTCCGCTATCGCGTCGACGGCGACACCGTGCAACGCGTGCAGCCGGCCGCCGCCAACGGCCGCGATTTCGTCG
ACGAGTGGCTGAAGGTGGACGACGTGCTCGCGCGCGAATGGAGCGAACCCGAGGCCGCCGGGACCGCGCTGAAAGCCCGG
CAGACGTTCAACGCGGAAAGCAAGGCGCCCGATATCGGCTTCGCATACGGCCCGGTACGCGGCTGTTCCGACAGCAAGGA
TCGCTTCCAAGTCGAACTGGATCTGACGGGCAAGGGTGGAGAAACGGTCGCGCGGCGCTACGCGCTGATCCGCCAGGAGC
GCAACGGCTTCACGATGCTCGGGCTGCGCAACGCGTCCGAGCCCGCGTGTCGCGGCGCGGATCTGATGCCGCGGCACTGA

Upstream 100 bases:

>100_bases
TCGTTGCTCGATGAAAGACTGAGGAAACTGTCGTTCCCGGTCCGAAATAACCGTGCCTTACAAGACCGAATCCCGTTGCT
ACGACGGAAGACTCAATTCG

Downstream 100 bases:

>100_bases
GCCGTCAGCCGCGTGGCGCAGCGGTGAAATCGCGCCGGACAGCCGACAACGACAAGTGACTGGGGCGTGGCGGCACGGCG
CGATCGCCCGCACCGACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MNKSPRRAALALCVATSPAAFAASPCPAADTAARAALDAQHRVQRAPNPESDGAGTVEVSPPLRDALRAYKQALVGAIDA
RLVCSDEHVEAVALKRTLAATLGVPAQPAQPKTGESAFGRNPDVDVTRDGTSRPLLFVRAGFDIACGDDNLLTAYAWENG
RWQRVLRWQADEYKDIGGAYGGGFWFGALPGGQVAVVHGTPWCSSRWSRFGADVIAPANGSAAQRTLFHTAHGYVIDDDS
IRFKVRADGFELRTTVGSLDGDVMTRPGIFRYRVDGDTVQRVQPAAANGRDFVDEWLKVDDVLAREWSEPEAAGTALKAR
QTFNAESKAPDIGFAYGPVRGCSDSKDRFQVELDLTGKGGETVARRYALIRQERNGFTMLGLRNASEPACRGADLMPRH

Sequences:

>Translated_399_residues
MNKSPRRAALALCVATSPAAFAASPCPAADTAARAALDAQHRVQRAPNPESDGAGTVEVSPPLRDALRAYKQALVGAIDA
RLVCSDEHVEAVALKRTLAATLGVPAQPAQPKTGESAFGRNPDVDVTRDGTSRPLLFVRAGFDIACGDDNLLTAYAWENG
RWQRVLRWQADEYKDIGGAYGGGFWFGALPGGQVAVVHGTPWCSSRWSRFGADVIAPANGSAAQRTLFHTAHGYVIDDDS
IRFKVRADGFELRTTVGSLDGDVMTRPGIFRYRVDGDTVQRVQPAAANGRDFVDEWLKVDDVLAREWSEPEAAGTALKAR
QTFNAESKAPDIGFAYGPVRGCSDSKDRFQVELDLTGKGGETVARRYALIRQERNGFTMLGLRNASEPACRGADLMPRH
>Mature_399_residues
MNKSPRRAALALCVATSPAAFAASPCPAADTAARAALDAQHRVQRAPNPESDGAGTVEVSPPLRDALRAYKQALVGAIDA
RLVCSDEHVEAVALKRTLAATLGVPAQPAQPKTGESAFGRNPDVDVTRDGTSRPLLFVRAGFDIACGDDNLLTAYAWENG
RWQRVLRWQADEYKDIGGAYGGGFWFGALPGGQVAVVHGTPWCSSRWSRFGADVIAPANGSAAQRTLFHTAHGYVIDDDS
IRFKVRADGFELRTTVGSLDGDVMTRPGIFRYRVDGDTVQRVQPAAANGRDFVDEWLKVDDVLAREWSEPEAAGTALKAR
QTFNAESKAPDIGFAYGPVRGCSDSKDRFQVELDLTGKGGETVARRYALIRQERNGFTMLGLRNASEPACRGADLMPRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43000; Mature: 43000

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSPRRAALALCVATSPAAFAASPCPAADTAARAALDAQHRVQRAPNPESDGAGTVEVS
CCCCCCCEEEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
PPLRDALRAYKQALVGAIDARLVCSDEHVEAVALKRTLAATLGVPAQPAQPKTGESAFGR
CCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
NPDVDVTRDGTSRPLLFVRAGFDIACGDDNLLTAYAWENGRWQRVLRWQADEYKDIGGAY
CCCCEEECCCCCCCEEEEEECCEEEECCCCEEEEEEECCCCEEEHEECCCHHHHHCCCCC
GGGFWFGALPGGQVAVVHGTPWCSSRWSRFGADVIAPANGSAAQRTLFHTAHGYVIDDDS
CCCEEEECCCCCCEEEEECCCCHHHHHHHCCCCEEECCCCCHHHHHHEEECCCEEECCCC
IRFKVRADGFELRTTVGSLDGDVMTRPGIFRYRVDGDTVQRVQPAAANGRDFVDEWLKVD
EEEEEEECCEEEEEECCCCCCCEECCCCEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHH
DVLAREWSEPEAAGTALKARQTFNAESKAPDIGFAYGPVRGCSDSKDRFQVELDLTGKGG
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCC
ETVARRYALIRQERNGFTMLGLRNASEPACRGADLMPRH
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKSPRRAALALCVATSPAAFAASPCPAADTAARAALDAQHRVQRAPNPESDGAGTVEVS
CCCCCCCEEEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
PPLRDALRAYKQALVGAIDARLVCSDEHVEAVALKRTLAATLGVPAQPAQPKTGESAFGR
CCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
NPDVDVTRDGTSRPLLFVRAGFDIACGDDNLLTAYAWENGRWQRVLRWQADEYKDIGGAY
CCCCEEECCCCCCCEEEEEECCEEEECCCCEEEEEEECCCCEEEHEECCCHHHHHCCCCC
GGGFWFGALPGGQVAVVHGTPWCSSRWSRFGADVIAPANGSAAQRTLFHTAHGYVIDDDS
CCCEEEECCCCCCEEEEECCCCHHHHHHHCCCCEEECCCCCHHHHHHEEECCCEEECCCC
IRFKVRADGFELRTTVGSLDGDVMTRPGIFRYRVDGDTVQRVQPAAANGRDFVDEWLKVD
EEEEEEECCEEEEEECCCCCCCEECCCCEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHH
DVLAREWSEPEAAGTALKARQTFNAESKAPDIGFAYGPVRGCSDSKDRFQVELDLTGKGG
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCC
ETVARRYALIRQERNGFTMLGLRNASEPACRGADLMPRH
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA