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The map label for this gene is qseB [H]

Identifier: 116690638

GI number: 116690638

Start: 2900243

End: 2900905

Strand: Reverse

Name: qseB [H]

Synonym: Bcen2424_2618

Alternate gene names: 116690638

Gene position: 2900905-2900243 (Counterclockwise)

Preceding gene: 116690642

Following gene: 116690637

Centisome position: 83.27

GC content: 69.98

Gene sequence:

>663_bases
ATGCGGATTCTGCTTGTCGAAGATGATCGAATGATTGCCGAGGGCGTGCGCAAGGCGCTGCGCTCGGACGGCTTTGCGGT
CGACTGGGTGCAGGACGGCGACGCCGCGCTCACCGCGCTCGGCGGCGAGACGTACGATCTGCTGCTGCTCGATCTCGGCC
TGCCGAAGCGCGACGGCATCGACGTGCTGCGCACGCTGCGCGGGCGCGGGCTCGCGCTGCCGGTGCTGATCGTCACCGCG
CGCGATGCCGTCGCCGATCGCGTGAAGGGGCTCGACGCGGGCGCCGACGACTACCTCGTCAAGCCGTTCGATCTCGACGA
GCTGGGCGCGCGGATGCGCGCGCTGATCCGCCGCCAGGCCGGGCGCAGCGAGTCGCTGATCCGCCACGGCGCGCTGACGC
TCGATCCCGCGTCGCACCAGGTGACGCTCGACGGTGCGCCCGTCGCGCTGTCCGCACGCGAGTTCGCGCTGCTCGAGGCG
CTGCTCGCGCGGCCGGGCGCGGTGCTGTCGAAGAGCCAGCTCGAGGAAAAGATGTACGGCTGGGGCGAGGAGATCGGCAG
CAACACGGTCGAGGTCTACATCCACGCGCTGCGCAAGAAGCTCGGCTCGGACCTGATCCGCAACGTGCGCGGGCTCGGCT
ACATGGTCGTCAAGGAAAGCTGA

Upstream 100 bases:

>100_bases
CCCTTGCAATCCGCCTTACTGTTGCATTGCACGCCGCGCACGCGATTCGCGGCGCTACAATGGTCGCCGTGTTTGACTCG
CCCCATGGATGCGTGGCCCG

Downstream 100 bases:

>100_bases
CGCGTGCGGTCGATTCGTCATCAATTGCTGATCTGGCTGCTCGCGATCGTCGTCGCGGGCGTGGGCATGGCGGGCTGGCT
CATCTACCGGCAGGCGCTCG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRILLVEDDRMIAEGVRKALRSDGFAVDWVQDGDAALTALGGETYDLLLLDLGLPKRDGIDVLRTLRGRGLALPVLIVTA
RDAVADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQAGRSESLIRHGALTLDPASHQVTLDGAPVALSAREFALLEA
LLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES

Sequences:

>Translated_220_residues
MRILLVEDDRMIAEGVRKALRSDGFAVDWVQDGDAALTALGGETYDLLLLDLGLPKRDGIDVLRTLRGRGLALPVLIVTA
RDAVADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQAGRSESLIRHGALTLDPASHQVTLDGAPVALSAREFALLEA
LLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES
>Mature_220_residues
MRILLVEDDRMIAEGVRKALRSDGFAVDWVQDGDAALTALGGETYDLLLLDLGLPKRDGIDVLRTLRGRGLALPVLIVTA
RDAVADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQAGRSESLIRHGALTLDPASHQVTLDGAPVALSAREFALLEA
LLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=52.3148148148148, Blast_Score=223, Evalue=6e-60,
Organism=Escherichia coli, GI1790552, Length=217, Percent_Identity=45.6221198156682, Blast_Score=191, Evalue=4e-50,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=39.8190045248869, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=39.6396396396396, Blast_Score=146, Evalue=9e-37,
Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=34.703196347032, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=39.0909090909091, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1790860, Length=219, Percent_Identity=37.8995433789954, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=33.9130434782609, Blast_Score=127, Evalue=4e-31,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=36.5296803652968, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=34.5454545454545, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=35.7758620689655, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787229, Length=222, Percent_Identity=31.0810810810811, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=29.0748898678414, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788550, Length=162, Percent_Identity=32.7160493827161, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=28.5106382978723, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790437, Length=110, Percent_Identity=37.2727272727273, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790299, Length=105, Percent_Identity=37.1428571428571, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787487, Length=108, Percent_Identity=37.037037037037, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=33.0578512396694, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1788713, Length=92, Percent_Identity=36.9565217391304, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI48994928, Length=121, Percent_Identity=34.7107438016529, Blast_Score=61, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=176, Percent_Identity=26.7045454545455, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 23940; Mature: 23940

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLVEDDRMIAEGVRKALRSDGFAVDWVQDGDAALTALGGETYDLLLLDLGLPKRDGI
CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCH
DVLRTLRGRGLALPVLIVTARDAVADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQA
HHHHHHHCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GRSESLIRHGALTLDPASHQVTLDGAPVALSAREFALLEALLARPGAVLSKSQLEEKMYG
CCHHHHHHCCCEEECCCCCEEEECCCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
WGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MRILLVEDDRMIAEGVRKALRSDGFAVDWVQDGDAALTALGGETYDLLLLDLGLPKRDGI
CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCH
DVLRTLRGRGLALPVLIVTARDAVADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQA
HHHHHHHCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GRSESLIRHGALTLDPASHQVTLDGAPVALSAREFALLEALLARPGAVLSKSQLEEKMYG
CCHHHHHHCCCEEECCCCCEEEECCCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
WGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]