| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is msrA [H]
Identifier: 116690591
GI number: 116690591
Start: 2846977
End: 2847537
Strand: Reverse
Name: msrA [H]
Synonym: Bcen2424_2571
Alternate gene names: 116690591
Gene position: 2847537-2846977 (Counterclockwise)
Preceding gene: 116690592
Following gene: 116690587
Centisome position: 81.73
GC content: 64.35
Gene sequence:
>561_bases ATGGGGAACGAGATGCTTGAAACCGCGACGCTCGGAGGCGGGTGTTTCTGGTGCACGGAGGCCGTGTTTCTCGACGTCGA TGGCGTGACGGCCGTCCAGTCGGGTTATGCGGGCGGCCATACGCGCAACCCTGGCTATCGCGACATCTGCGAAGGCGACA CCGGCCACGCGGAAGTCGTCAACGTGACGTTCGATCCGGCGCGCATCGGCTATCGCGAGATCCTCGAGATCTTCTTCGCG ACGCACGATCCGACCACGCTGAACCGGCAGGGCAACGACGTCGGCACGCAGTACCGGTCGGTCGTGTTCACGCATTCGGA TGCGCAGCGCGACACGGCGCTCGACCTGATTGCCGAGCTCGAACGCGAACAGGTGTTCGGCCAGCCGATCGTCACGCAGG TCGTGCCGCTCGACGGCAACTACTGGCCGGCCGAGGACTATCATCAGAACTATTACGCGCGCAACCCGGGGCAGGGCTAT TGCTCGGTCGTGATCGGGCCGAAGCTCGCGAAATTCCGGCAGAAGTTCTCGCACCGGCTGAAGTCGCTGCGCGGCGCGTA A
Upstream 100 bases:
>100_bases GTGCCGCTGCCTCCCGCCTCGCGGGGCGGGCAGCGGCGATGCGAAACGATGGCGCCGGCACTGGCGTGCCGGCTGCCGTC ATCCACGAGGGACTGATTTC
Downstream 100 bases:
>100_bases GCGTCGGCGGCGGCGGAAACCGCGGTCACGCCGCCTCGTTGCGCCACTGTGCGCACGCGGCGGCGATTTCGCGTGCGAGC GCGATGCACGACAGCGGCGC
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MGNEMLETATLGGGCFWCTEAVFLDVDGVTAVQSGYAGGHTRNPGYRDICEGDTGHAEVVNVTFDPARIGYREILEIFFA THDPTTLNRQGNDVGTQYRSVVFTHSDAQRDTALDLIAELEREQVFGQPIVTQVVPLDGNYWPAEDYHQNYYARNPGQGY CSVVIGPKLAKFRQKFSHRLKSLRGA
Sequences:
>Translated_186_residues MGNEMLETATLGGGCFWCTEAVFLDVDGVTAVQSGYAGGHTRNPGYRDICEGDTGHAEVVNVTFDPARIGYREILEIFFA THDPTTLNRQGNDVGTQYRSVVFTHSDAQRDTALDLIAELEREQVFGQPIVTQVVPLDGNYWPAEDYHQNYYARNPGQGY CSVVIGPKLAKFRQKFSHRLKSLRGA >Mature_185_residues GNEMLETATLGGGCFWCTEAVFLDVDGVTAVQSGYAGGHTRNPGYRDICEGDTGHAEVVNVTFDPARIGYREILEIFFAT HDPTTLNRQGNDVGTQYRSVVFTHSDAQRDTALDLIAELEREQVFGQPIVTQVVPLDGNYWPAEDYHQNYYARNPGQGYC SVVIGPKLAKFRQKFSHRLKSLRGA
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=163, Percent_Identity=43.558282208589, Blast_Score=136, Evalue=9e-33, Organism=Homo sapiens, GI208609995, Length=163, Percent_Identity=43.558282208589, Blast_Score=136, Evalue=1e-32, Organism=Homo sapiens, GI208609993, Length=114, Percent_Identity=43.859649122807, Blast_Score=91, Evalue=4e-19, Organism=Escherichia coli, GI1790665, Length=157, Percent_Identity=42.0382165605096, Blast_Score=125, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17533973, Length=149, Percent_Identity=32.8859060402685, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320881, Length=161, Percent_Identity=41.6149068322981, Blast_Score=114, Evalue=1e-26, Organism=Drosophila melanogaster, GI24664627, Length=165, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=6e-20, Organism=Drosophila melanogaster, GI24664631, Length=167, Percent_Identity=31.7365269461078, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI45553131, Length=161, Percent_Identity=31.6770186335404, Blast_Score=87, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 20651; Mature: 20520
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNEMLETATLGGGCFWCTEAVFLDVDGVTAVQSGYAGGHTRNPGYRDICEGDTGHAEVV CCCHHHHHHCCCCCHHEECCEEEEECCCCHHHHCCCCCCCCCCCCCCHHCCCCCCCEEEE NVTFDPARIGYREILEIFFATHDPTTLNRQGNDVGTQYRSVVFTHSDAQRDTALDLIAEL EEEECHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHH EREQVFGQPIVTQVVPLDGNYWPAEDYHQNYYARNPGQGYCSVVIGPKLAKFRQKFSHRL HHHHHCCCCCHHEEEECCCCCCCCHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHH KSLRGA HHHCCC >Mature Secondary Structure GNEMLETATLGGGCFWCTEAVFLDVDGVTAVQSGYAGGHTRNPGYRDICEGDTGHAEVV CCHHHHHHCCCCCHHEECCEEEEECCCCHHHHCCCCCCCCCCCCCCHHCCCCCCCEEEE NVTFDPARIGYREILEIFFATHDPTTLNRQGNDVGTQYRSVVFTHSDAQRDTALDLIAEL EEEECHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHH EREQVFGQPIVTQVVPLDGNYWPAEDYHQNYYARNPGQGYCSVVIGPKLAKFRQKFSHRL HHHHHCCCCCHHEEEECCCCCCCCHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHH KSLRGA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]