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The map label for this gene is ychA [C]

Identifier: 116690569

GI number: 116690569

Start: 2825014

End: 2825856

Strand: Reverse

Name: ychA [C]

Synonym: Bcen2424_2549

Alternate gene names: 116690569

Gene position: 2825856-2825014 (Counterclockwise)

Preceding gene: 116690570

Following gene: 116690564

Centisome position: 81.11

GC content: 68.21

Gene sequence:

>843_bases
ATGACCCGCGTCCTCGACTACTTCAGCACGCTCGTGGCGGACGACGACAGTCTGCCCGTCACGGAAGCCGCGCTGTCGCT
GGCGCAGGACGCGTATCCCGACCTCGACCTGCAGGGCACGCTGGCCGAACTCGACATGCTGGCGGCGCGGCTGCGCCGGC
GGCTCGCCGACGATACCGACCTGAAGGGCCGCGTCGCCGCGCTGAACGACTTCTTCTTTCGCGAGCTCGGCTTCGCGTGC
AATCACAACGATTACTACGACCCCGATAACAGCCACCTGAATGCCGTGCTGAAGCGGCGGCGCGGGATTCCGATCTCGCT
GTCGGTGCTGTACCTGGAGCTCGCCGAGCAGATCGGCGTGCCGGCGCGCGGCGTATCGTTCCCCGGCCATTTCCTGCTGC
GCGTGACGCTGCCGGATGGCGACCTGATCATCGATCCGACCAACGGCCATTCGCTGTCCGAAGCCGAGATGGTCGAGATG
CTCGAGCCGTACGTCGCGCGGGCGGCGGGGGCGGTCGACAGCGCGTTGCGCGCGCTGCTGCAGCCCGCGACGAGCCGCGA
GATCATCGCGCGGATGCTGCGCAACCTGAAGACGATCTATCTGCAGACGGAGCGCTGGCAGCGGCTGCTCGCGGTGCAGC
AGCGGCTCGTGATCCTGCTGCCCGAGCAGCTCGACGAGGTGCGCGACCGCGGCTTCGCGTATGCGCGGCTCGACTACCTG
CGCCCCGCGCTCGAGGATCTCGAGCAGTATCTCGGCGAGCGGCCCGAGGCGGAAGACGCGACCGTCGTCGAGTCGCAGGT
CAGCGAATTGCGGCAACGGATGCAGCGCGACGGCGAGGATTGA

Upstream 100 bases:

>100_bases
CTGCGTGCCTCGTGCTGTTTGCTGCACTATATTTCGGTATGTTGTGGGTGATGGGCTTCAAATACGCTTACTTCAGAAGG
CGCGCCAAGTGACGACCGCA

Downstream 100 bases:

>100_bases
GCCGCCAGCGCGCTGCTTCTTGGACACGGAAAAAACGCCCGCATCGCGGGCGTTTTTCTTGCGCGCTTGCCGCAGGGGCG
TGCAAAGCGTGACAGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTRVLDYFSTLVADDDSLPVTEAALSLAQDAYPDLDLQGTLAELDMLAARLRRRLADDTDLKGRVAALNDFFFRELGFAC
NHNDYYDPDNSHLNAVLKRRRGIPISLSVLYLELAEQIGVPARGVSFPGHFLLRVTLPDGDLIIDPTNGHSLSEAEMVEM
LEPYVARAAGAVDSALRALLQPATSREIIARMLRNLKTIYLQTERWQRLLAVQQRLVILLPEQLDEVRDRGFAYARLDYL
RPALEDLEQYLGERPEAEDATVVESQVSELRQRMQRDGED

Sequences:

>Translated_280_residues
MTRVLDYFSTLVADDDSLPVTEAALSLAQDAYPDLDLQGTLAELDMLAARLRRRLADDTDLKGRVAALNDFFFRELGFAC
NHNDYYDPDNSHLNAVLKRRRGIPISLSVLYLELAEQIGVPARGVSFPGHFLLRVTLPDGDLIIDPTNGHSLSEAEMVEM
LEPYVARAAGAVDSALRALLQPATSREIIARMLRNLKTIYLQTERWQRLLAVQQRLVILLPEQLDEVRDRGFAYARLDYL
RPALEDLEQYLGERPEAEDATVVESQVSELRQRMQRDGED
>Mature_279_residues
TRVLDYFSTLVADDDSLPVTEAALSLAQDAYPDLDLQGTLAELDMLAARLRRRLADDTDLKGRVAALNDFFFRELGFACN
HNDYYDPDNSHLNAVLKRRRGIPISLSVLYLELAEQIGVPARGVSFPGHFLLRVTLPDGDLIIDPTNGHSLSEAEMVEML
EPYVARAAGAVDSALRALLQPATSREIIARMLRNLKTIYLQTERWQRLLAVQQRLVILLPEQLDEVRDRGFAYARLDYLR
PALEDLEQYLGERPEAEDATVVESQVSELRQRMQRDGED

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306502, Length=68, Percent_Identity=51.4705882352941, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI16306500, Length=68, Percent_Identity=51.4705882352941, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1787465, Length=256, Percent_Identity=27.34375, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31654; Mature: 31523

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVLDYFSTLVADDDSLPVTEAALSLAQDAYPDLDLQGTLAELDMLAARLRRRLADDTD
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
LKGRVAALNDFFFRELGFACNHNDYYDPDNSHLNAVLKRRRGIPISLSVLYLELAEQIGV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PARGVSFPGHFLLRVTLPDGDLIIDPTNGHSLSEAEMVEMLEPYVARAAGAVDSALRALL
CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QPATSREIIARMLRNLKTIYLQTERWQRLLAVQQRLVILLPEQLDEVRDRGFAYARLDYL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHH
RPALEDLEQYLGERPEAEDATVVESQVSELRQRMQRDGED
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRVLDYFSTLVADDDSLPVTEAALSLAQDAYPDLDLQGTLAELDMLAARLRRRLADDTD
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
LKGRVAALNDFFFRELGFACNHNDYYDPDNSHLNAVLKRRRGIPISLSVLYLELAEQIGV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PARGVSFPGHFLLRVTLPDGDLIIDPTNGHSLSEAEMVEMLEPYVARAAGAVDSALRALL
CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QPATSREIIARMLRNLKTIYLQTERWQRLLAVQQRLVILLPEQLDEVRDRGFAYARLDYL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHH
RPALEDLEQYLGERPEAEDATVVESQVSELRQRMQRDGED
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]