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The map label for this gene is ycaR [C]

Identifier: 116690566

GI number: 116690566

Start: 2822884

End: 2823078

Strand: Direct

Name: ycaR [C]

Synonym: Bcen2424_2546

Alternate gene names: 116690566

Gene position: 2822884-2823078 (Clockwise)

Preceding gene: 116690565

Following gene: 116690567

Centisome position: 81.03

GC content: 65.64

Gene sequence:

>195_bases
GTGGACGCTCGCCTGCTTGAAATCATTGTGTGCCCTATCTGCAAAGGCCCGCTCCACTACGACCGTGCCGCGCAGGAACT
GATCTGCAACGCGGACAAGCTCGCGTACCCGATCCGCGACGGCATCCCCGTGATGCTGGTCGACGAAGCGCGCCAGACCG
TCGAAGGCACGCCGGTCGATCCGGCCGGCCGCTGA

Upstream 100 bases:

>100_bases
GTAAAATTGGGCGCTTCCTGGCGCGACGCCCGACTGTGGGTAGTCCCCGTCGAAGCCGCGCTCGACCCTCGCCTCATTGC
CCTCGTTGTGGAGAAACTCC

Downstream 100 bases:

>100_bases
ACCGCCGCGCCGCTCGCCCGGCGCCCCGTTCGACACCGTGACGGCCCGGCCCCGGCCGGGCTGCCGCACTCGCCGGGCGC
CCGGCTTCCGGCGTCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MDARLLEIIVCPICKGPLHYDRAAQELICNADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGR

Sequences:

>Translated_64_residues
MDARLLEIIVCPICKGPLHYDRAAQELICNADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGR
>Mature_64_residues
MDARLLEIIVCPICKGPLHYDRAAQELICNADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGR

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Escherichia coli, GI1787146, Length=51, Percent_Identity=64.7058823529412, Blast_Score=74, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 7032; Mature: 7032

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARLLEIIVCPICKGPLHYDRAAQELICNADKLAYPIRDGIPVMLVDEARQTVEGTPVD
CCCHHEEHEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCC
PAGR
CCCC
>Mature Secondary Structure
MDARLLEIIVCPICKGPLHYDRAAQELICNADKLAYPIRDGIPVMLVDEARQTVEGTPVD
CCCHHEEHEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCC
PAGR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA