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The map label for this gene is yjcC [C]

Identifier: 116690557

GI number: 116690557

Start: 2813452

End: 2814726

Strand: Direct

Name: yjcC [C]

Synonym: Bcen2424_2537

Alternate gene names: 116690557

Gene position: 2813452-2814726 (Clockwise)

Preceding gene: 116690556

Following gene: 116690561

Centisome position: 80.76

GC content: 70.59

Gene sequence:

>1275_bases
ATGAGCATGATCGAAATCGATCCCCCCGGCTTTCAGCCGCCCCGCCCGGTCGCCGGCGACGACGGGAACCGACGCACCGT
GCTGTACGGCGGCTACACCGTGTTCAGCGTGTTCCAGCCCGTGTTCTCGGTGTCGCACCGGCGCGCGATCGGCTATCACG
CGTCGCTGCGCGCGCACGACGAGGAAAGCCGCCAGGTGGCGTCGCACGAGGTGTTCACGCAGGCGGCGCGGCGCGGCGAC
CTGCTCGAGCTCGGCCGGCTCGCCGAATCGTTGCATCTCGGTAACTTCCACGCGTTCGACAGCCACGACGAATGGCTCTT
CCTGAGCCTGCATCCGGCCGCGCTGATGGACACCATCTACGGCGACGCGCTGCTCGCGAACCTGAAGGCGCTCGGGCTGC
CGCCGCACCGCGTGGTGCTCGAGGTGCCCGAACAGGCCGGCGGCGAGACGCCACGCTATGCGGCGATCATCGACGGGCTG
CGCAAGGCCGGCTTCCTGATCGCGCTCGTCGGGTTCGGCGCGAAGCATTCGAACATCGATCGCGTGTGGCACCTGCATCC
GGACATCGTCACGCTGGACCGCGGCATCCTCGCGCAGGCGAGCGAGCACTCGCATCTCGAACGCGTGCTGCCGGGGCTCG
TGTCGCTGCTGCACGAATCCGGCCAGCTCGTGCTGATGGGCGGGCTCGCGACCGAACGCGACGCGCTGATCGCGCTCGAA
TGCGACGTCGATTTCGTACAGGGCCAGTACTTCGCGGGGCCGAGCGTCGATCCCGTGCAGCCGCAGGCCGCCGCGGGCTG
CATGGATACGCTGTCGGCCGCGCTGCGGCTGCGCGTCGCGCAGCGCGAACGCACGCAGGCCGAACGGCTCGCGCCGTACG
TGGCCGCGCTCGAGGACGCGAGCCGCAAGCTCGGCGCGGGCGAATCGCTCACCGATGCGGCGGCGGCCGTGCTCGGGCTG
CCCGAGACCGCGCGCTGCTTCCTGCTCGACGCGTCGGGCCGCCAGATCGGCGACAACGTGCTCGCGCGCGGCAGCGTGTC
GCAACGTGCGAAGCGCTTCCGCCCGCTGCTGCATTCCGAAGGCGCGAGCTGGGAACGCCGCCCGTACTTCATCGACGCGA
TGCGCGCGCCCGGCGGCGTGCATCTGACGCCGCCCTACCTGTCGATCAACGAGGCGCACCTGTGCGTGACCGCGTCGATC
GCCGCACCGGCCGCGACGGGCATGCAGGTGCTCTGCGTCGACATCAACTGGGAAGCGGCGCTCAGCCGCGAGTGA

Upstream 100 bases:

>100_bases
CATGTCGGCAGCGGCGGGCGGCCGCACACGGCGCCTGCCGTGCATACTTCTTGCTCGCGTATTCTGTAGGTAAACTGGGA
GTCTTCCTTCGGCCGACATC

Downstream 100 bases:

>100_bases
GTTCGCCGGCGCGGCGCGCTCACGCGTCGCCGCCCGCCTTGCGCACGATCAGCCGGTGCACGCGCTTGCCGGACGACGCG
CTGACGACCTCGTGTTCGTC

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: EAL Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase; EAL Domain Protein; Sensor Protein; Cyclic Diguanylate Phosphodiesterase Domain Protein; Signal Transduction Protein; Signaling Protein; Sensory Box/GGDEF Family Protein; Cyclic Diguanylate Phosphodiesterase

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSMIEIDPPGFQPPRPVAGDDGNRRTVLYGGYTVFSVFQPVFSVSHRRAIGYHASLRAHDEESRQVASHEVFTQAARRGD
LLELGRLAESLHLGNFHAFDSHDEWLFLSLHPAALMDTIYGDALLANLKALGLPPHRVVLEVPEQAGGETPRYAAIIDGL
RKAGFLIALVGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGLATERDALIALE
CDVDFVQGQYFAGPSVDPVQPQAAAGCMDTLSAALRLRVAQRERTQAERLAPYVAALEDASRKLGAGESLTDAAAAVLGL
PETARCFLLDASGRQIGDNVLARGSVSQRAKRFRPLLHSEGASWERRPYFIDAMRAPGGVHLTPPYLSINEAHLCVTASI
AAPAATGMQVLCVDINWEAALSRE

Sequences:

>Translated_424_residues
MSMIEIDPPGFQPPRPVAGDDGNRRTVLYGGYTVFSVFQPVFSVSHRRAIGYHASLRAHDEESRQVASHEVFTQAARRGD
LLELGRLAESLHLGNFHAFDSHDEWLFLSLHPAALMDTIYGDALLANLKALGLPPHRVVLEVPEQAGGETPRYAAIIDGL
RKAGFLIALVGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGLATERDALIALE
CDVDFVQGQYFAGPSVDPVQPQAAAGCMDTLSAALRLRVAQRERTQAERLAPYVAALEDASRKLGAGESLTDAAAAVLGL
PETARCFLLDASGRQIGDNVLARGSVSQRAKRFRPLLHSEGASWERRPYFIDAMRAPGGVHLTPPYLSINEAHLCVTASI
AAPAATGMQVLCVDINWEAALSRE
>Mature_423_residues
SMIEIDPPGFQPPRPVAGDDGNRRTVLYGGYTVFSVFQPVFSVSHRRAIGYHASLRAHDEESRQVASHEVFTQAARRGDL
LELGRLAESLHLGNFHAFDSHDEWLFLSLHPAALMDTIYGDALLANLKALGLPPHRVVLEVPEQAGGETPRYAAIIDGLR
KAGFLIALVGFGAKHSNIDRVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGLATERDALIALEC
DVDFVQGQYFAGPSVDPVQPQAAAGCMDTLSAALRLRVAQRERTQAERLAPYVAALEDASRKLGAGESLTDAAAAVLGLP
ETARCFLLDASGRQIGDNVLARGSVSQRAKRFRPLLHSEGASWERRPYFIDAMRAPGGVHLTPPYLSINEAHLCVTASIA
APAATGMQVLCVDINWEAALSRE

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790496, Length=239, Percent_Identity=21.7573221757322, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45904; Mature: 45773

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMIEIDPPGFQPPRPVAGDDGNRRTVLYGGYTVFSVFQPVFSVSHRRAIGYHASLRAHD
CCEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCEECEECCCC
EESRQVASHEVFTQAARRGDLLELGRLAESLHLGNFHAFDSHDEWLFLSLHPAALMDTIY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEEECHHHHHHHHH
GDALLANLKALGLPPHRVVLEVPEQAGGETPRYAAIIDGLRKAGFLIALVGFGAKHSNID
HHHHHHHHHHCCCCCCCEEEECCHHCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCC
RVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGLATERDALIALE
EEEEECCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEE
CDVDFVQGQYFAGPSVDPVQPQAAAGCMDTLSAALRLRVAQRERTQAERLAPYVAALEDA
ECCEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRKLGAGESLTDAAAAVLGLPETARCFLLDASGRQIGDNVLARGSVSQRAKRFRPLLHSE
HHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHCC
GASWERRPYFIDAMRAPGGVHLTPPYLSINEAHLCVTASIAAPAATGMQVLCVDINWEAA
CCCCCCCCEEEEEECCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCHHC
LSRE
CCCC
>Mature Secondary Structure 
SMIEIDPPGFQPPRPVAGDDGNRRTVLYGGYTVFSVFQPVFSVSHRRAIGYHASLRAHD
CEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCEECEECCCC
EESRQVASHEVFTQAARRGDLLELGRLAESLHLGNFHAFDSHDEWLFLSLHPAALMDTIY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEEECHHHHHHHHH
GDALLANLKALGLPPHRVVLEVPEQAGGETPRYAAIIDGLRKAGFLIALVGFGAKHSNID
HHHHHHHHHHCCCCCCCEEEECCHHCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCC
RVWHLHPDIVTLDRGILAQASEHSHLERVLPGLVSLLHESGQLVLMGGLATERDALIALE
EEEEECCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEE
CDVDFVQGQYFAGPSVDPVQPQAAAGCMDTLSAALRLRVAQRERTQAERLAPYVAALEDA
ECCEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRKLGAGESLTDAAAAVLGLPETARCFLLDASGRQIGDNVLARGSVSQRAKRFRPLLHSE
HHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHCC
GASWERRPYFIDAMRAPGGVHLTPPYLSINEAHLCVTASIAAPAATGMQVLCVDINWEAA
CCCCCCCCEEEEEECCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCHHC
LSRE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA