| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is mco [H]
Identifier: 116690541
GI number: 116690541
Start: 2793077
End: 2794684
Strand: Reverse
Name: mco [H]
Synonym: Bcen2424_2521
Alternate gene names: 116690541
Gene position: 2794684-2793077 (Counterclockwise)
Preceding gene: 116690543
Following gene: 116690539
Centisome position: 80.22
GC content: 70.96
Gene sequence:
>1608_bases ATGAGACGGAGAACCTTCCTGTCGCGCGCCATCGGCGTCGCGGCCGCGTCGCTGTTCGCGCGCACCGCGTCGGCGCAGCA TGCCGGTCACGCGGGCATGGCCGGCATGGATTCGATGGACGACATGCCGGGCATGTCGGGTATGTCAGGGATGTCGGCGC ACGCGCAGCACGGCCAGCCCGCGCCGGCCGCGCTCGCGGCCGCCGACGCGCTGCCGGCCGGCGCGCCGCTCGCGACGTTG CGCACGCTCGCCAACGAAAGCCGTGAGCCCGGCACGTTCCGGGCCACGCTGGTCGCTCAACCGGTGGCGCGACCGCTGCT GCGCGGCGCGCGGCCGACGACGTTCTGGCAGTTCGGTACCGGTACGCAAGGCCCCGTGGTCGGCCCGCTGATCGACGTGC GCGAGGGCGATACGGTCGAGATCCGGTTCGTGAACAAGCTGCCGCAGCCGTCGACGATCCACTGGCACGGCCTGCCCGTG CCGCCGGACCAGGACGGCAATCCGTCCGATCCCGTCGCGCCCGGCGCGTCGCGCGTGTATCGCTTCACGCTGCCGAAGGG CAGCGCCGGGACTTACTGGTACCACCCGCATCCGCACATGATGACCGCCGAGCAGGTGTTCCGCGGGCTGGCCGGCCCGT TCGTCGTGCGCGCCGCGGACGATCCGCTAGCCGGCTGGCCCGAGCGTCACCTGTTCGTGTCGGACCTGAAGCTTGCACGC GACGGCACGATTGCGCCGAACGACATGATGGACTGGATGAACGGCCGGGAAGGTCAATTCGTCCTGGTCAACGGCGCGCG CCGGCCGCGCATCGACGTCGCGAGCGACGAGCGCTGGCGTGTCTGGAATGCATGCAGCGCGCGCTACCTGCGCATCGCGT TCGACGACGGCCGCGTGTTCGAGCACGCAGGCACCGACGGCGGATTGTTCGGCACGGCGCGGCGCGTGACGTCGCTGCTG ATCGCGCCGGGCGAGCGCGCGGAGTTGCTGGTGCGCGCCGGCGACCGCGCGTCGCGCGCGGTGCTGCAGGCGGCCGAGTA CGACCGCCGCAAGATGGCGATGTCGCACGACGACGGCCACGGCAGCCTGCCGCCCGATCCGGCGCTGGCGCTGGCCGATG TCGCGTTTGCGCCCGCCGAGGCCCGTGTGCTGCCTGCCACGCTGCGCGCGGTGCCGCCGCTCGGCGAACCGGTCGCGCAC AAGACGGTCGCGTTCGGCGAGGAAATGGACATGGACGCGATGATGAAGGGCGCGGCGCACGGCCGCCCGGCAGGCATGCG CTTCACGATCAACGGCGACACCTACGCGCCGCACCGCGCGACGCTGACGAGCCGCCGCGGCGACGTCGAGCGCTGGGAGA TCCGCAATACGACGGACATGGACCACCCATTCCACCTGCACGGCACGCAGTTCCAGGTGATCGAGCGGGCATCGGCCGGT TCGCGCACGAGCGAGCCGTTCCGCGCGTGGCGCGATACCGTGAACGTGCGCAGCGGTGAAACCGTGTCGCTGCTCGTCAC GCAAGACATGCCCGGCGAGCGCATGTTTCATTGCCACATTCTCGAACACGAGGATCTCGGCATGATGGGTACGCTGAAGG TCGTGTAA
Upstream 100 bases:
>100_bases CCCGCGGGGGCGGCGGCGTTTTTCGATCCGGCCCTGCGGTTATGATGACGCGACCGTCGCGGCTGTCGCGCGGCGCTGCA TGAACAACGAGGATCGATTG
Downstream 100 bases:
>100_bases CGAAGCCGCGGATATGTTTCACATGCGGATTCGATATCCGATCTGCATGCGTGACAAGACAATGTGTGTTCAATTATCGG GATTGAACGAAAAGGCCGGC
Product: multicopper oxidase, type 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MRRRTFLSRAIGVAAASLFARTASAQHAGHAGMAGMDSMDDMPGMSGMSGMSAHAQHGQPAPAALAAADALPAGAPLATL RTLANESREPGTFRATLVAQPVARPLLRGARPTTFWQFGTGTQGPVVGPLIDVREGDTVEIRFVNKLPQPSTIHWHGLPV PPDQDGNPSDPVAPGASRVYRFTLPKGSAGTYWYHPHPHMMTAEQVFRGLAGPFVVRAADDPLAGWPERHLFVSDLKLAR DGTIAPNDMMDWMNGREGQFVLVNGARRPRIDVASDERWRVWNACSARYLRIAFDDGRVFEHAGTDGGLFGTARRVTSLL IAPGERAELLVRAGDRASRAVLQAAEYDRRKMAMSHDDGHGSLPPDPALALADVAFAPAEARVLPATLRAVPPLGEPVAH KTVAFGEEMDMDAMMKGAAHGRPAGMRFTINGDTYAPHRATLTSRRGDVERWEIRNTTDMDHPFHLHGTQFQVIERASAG SRTSEPFRAWRDTVNVRSGETVSLLVTQDMPGERMFHCHILEHEDLGMMGTLKVV
Sequences:
>Translated_535_residues MRRRTFLSRAIGVAAASLFARTASAQHAGHAGMAGMDSMDDMPGMSGMSGMSAHAQHGQPAPAALAAADALPAGAPLATL RTLANESREPGTFRATLVAQPVARPLLRGARPTTFWQFGTGTQGPVVGPLIDVREGDTVEIRFVNKLPQPSTIHWHGLPV PPDQDGNPSDPVAPGASRVYRFTLPKGSAGTYWYHPHPHMMTAEQVFRGLAGPFVVRAADDPLAGWPERHLFVSDLKLAR DGTIAPNDMMDWMNGREGQFVLVNGARRPRIDVASDERWRVWNACSARYLRIAFDDGRVFEHAGTDGGLFGTARRVTSLL IAPGERAELLVRAGDRASRAVLQAAEYDRRKMAMSHDDGHGSLPPDPALALADVAFAPAEARVLPATLRAVPPLGEPVAH KTVAFGEEMDMDAMMKGAAHGRPAGMRFTINGDTYAPHRATLTSRRGDVERWEIRNTTDMDHPFHLHGTQFQVIERASAG SRTSEPFRAWRDTVNVRSGETVSLLVTQDMPGERMFHCHILEHEDLGMMGTLKVV >Mature_535_residues MRRRTFLSRAIGVAAASLFARTASAQHAGHAGMAGMDSMDDMPGMSGMSGMSAHAQHGQPAPAALAAADALPAGAPLATL RTLANESREPGTFRATLVAQPVARPLLRGARPTTFWQFGTGTQGPVVGPLIDVREGDTVEIRFVNKLPQPSTIHWHGLPV PPDQDGNPSDPVAPGASRVYRFTLPKGSAGTYWYHPHPHMMTAEQVFRGLAGPFVVRAADDPLAGWPERHLFVSDLKLAR DGTIAPNDMMDWMNGREGQFVLVNGARRPRIDVASDERWRVWNACSARYLRIAFDDGRVFEHAGTDGGLFGTARRVTSLL IAPGERAELLVRAGDRASRAVLQAAEYDRRKMAMSHDDGHGSLPPDPALALADVAFAPAEARVLPATLRAVPPLGEPVAH KTVAFGEEMDMDAMMKGAAHGRPAGMRFTINGDTYAPHRATLTSRRGDVERWEIRNTTDMDHPFHLHGTQFQVIERASAG SRTSEPFRAWRDTVNVRSGETVSLLVTQDMPGERMFHCHILEHEDLGMMGTLKVV
Specific function: May be involved in copper homeostasis and oxidative stress response [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=473, Percent_Identity=31.9238900634249, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI1789394, Length=441, Percent_Identity=28.5714285714286, Blast_Score=121, Evalue=9e-29, Organism=Drosophila melanogaster, GI24650186, Length=529, Percent_Identity=23.4404536862004, Blast_Score=92, Evalue=1e-18,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR002355 - InterPro: IPR008972 [H]
Pfam domain/function: PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 58111; Mature: 58111
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRTFLSRAIGVAAASLFARTASAQHAGHAGMAGMDSMDDMPGMSGMSGMSAHAQHGQP CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC APAALAAADALPAGAPLATLRTLANESREPGTFRATLVAQPVARPLLRGARPTTFWQFGT CCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCEEEEECC GTQGPVVGPLIDVREGDTVEIRFVNKLPQPSTIHWHGLPVPPDQDGNPSDPVAPGASRVY CCCCCCCCCEEECCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE RFTLPKGSAGTYWYHPHPHMMTAEQVFRGLAGPFVVRAADDPLAGWPERHLFVSDLKLAR EEECCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCEEHHHHEECC DGTIAPNDMMDWMNGREGQFVLVNGARRPRIDVASDERWRVWNACSARYLRIAFDDGRVF CCCCCCHHHHHHHCCCCCCEEEEECCCCCCEECCCCCCEEEECCCCCEEEEEEECCCEEE EHAGTDGGLFGTARRVTSLLIAPGERAELLVRAGDRASRAVLQAAEYDRRKMAMSHDDGH EECCCCCCCHHHHHHHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC GSLPPDPALALADVAFAPAEARVLPATLRAVPPLGEPVAHKTVAFGEEMDMDAMMKGAAH CCCCCCHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHCCCC GRPAGMRFTINGDTYAPHRATLTSRRGDVERWEIRNTTDMDHPFHLHGTQFQVIERASAG CCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCEEECCCCEEEEECCCCC SRTSEPFRAWRDTVNVRSGETVSLLVTQDMPGERMFHCHILEHEDLGMMGTLKVV CCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEC >Mature Secondary Structure MRRRTFLSRAIGVAAASLFARTASAQHAGHAGMAGMDSMDDMPGMSGMSGMSAHAQHGQP CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC APAALAAADALPAGAPLATLRTLANESREPGTFRATLVAQPVARPLLRGARPTTFWQFGT CCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCEEEEECC GTQGPVVGPLIDVREGDTVEIRFVNKLPQPSTIHWHGLPVPPDQDGNPSDPVAPGASRVY CCCCCCCCCEEECCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE RFTLPKGSAGTYWYHPHPHMMTAEQVFRGLAGPFVVRAADDPLAGWPERHLFVSDLKLAR EEECCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCEEHHHHEECC DGTIAPNDMMDWMNGREGQFVLVNGARRPRIDVASDERWRVWNACSARYLRIAFDDGRVF CCCCCCHHHHHHHCCCCCCEEEEECCCCCCEECCCCCCEEEECCCCCEEEEEEECCCEEE EHAGTDGGLFGTARRVTSLLIAPGERAELLVRAGDRASRAVLQAAEYDRRKMAMSHDDGH EECCCCCCCHHHHHHHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC GSLPPDPALALADVAFAPAEARVLPATLRAVPPLGEPVAHKTVAFGEEMDMDAMMKGAAH CCCCCCHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHCCCC GRPAGMRFTINGDTYAPHRATLTSRRGDVERWEIRNTTDMDHPFHLHGTQFQVIERASAG CCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCEEECCCCEEEEECCCCC SRTSEPFRAWRDTVNVRSGETVSLLVTQDMPGERMFHCHILEHEDLGMMGTLKVV CCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA