| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is cysD [H]
Identifier: 116690492
GI number: 116690492
Start: 2743192
End: 2744154
Strand: Reverse
Name: cysD [H]
Synonym: Bcen2424_2472
Alternate gene names: 116690492
Gene position: 2744154-2743192 (Counterclockwise)
Preceding gene: 116690493
Following gene: 116690491
Centisome position: 78.77
GC content: 67.08
Gene sequence:
>963_bases ATGAGCACGACGCTCGAGCAATCCGCCTTTGCCCCGCCCACCGGCGCCGACAGCCGCATGGGCCACCTCGACTGGCTCGA AGCCGAGTCGATCCACATCCTGCGCGAACTGGTTGCGGAATGCAGCAAGCCGGCGCTGTTGTTCTCGGGCGGCAAGGATT CGGTCGTCGTGCTGCATCTGGCGCTGAAGGCGTTCGGCCTCGGCGCGAACCGCAAGACGACGCTGCCGTTCCCGCTCGTG CACATCGACACGGGCCACAACTACGAGGAAGTGATCGACTTCCGCGACCGCCGTGCGCAAGAGCTCGGCGCCGAGCTGGT GGTCGGTCACGTCGAGGATTCGATCAAGCGCGGCACGGTCGTGCTGCGCCGCGAGACCGATTCGCGCAACGCCGCGCAGG CCGTCACGCTGCTCGAGACGATCGAACAGCACGGCTACACGGCGCTGATCGGCGGCGCGCGCCGCGACGAAGAGAAGGCC CGCGCGAAGGAGCGGATCTTCTCGTTCCGCGACGAATTCGGCCAGTGGGACCCGAAGGCGCAGCGCCCGGAACTGTGGAG CCTGTACAACGCCCGCCTGCACAAGGGCGAGCATCTGCGCGTGTTCCCGATCTCGAACTGGACCGAGCTCGACGTGTGGC AGTACATCGCGCGCGAGAACCTCGAACTGCCGTCGATCTATTACGCGCACCAGCGCGAGATCGTGCGCCGCAACGGGCTG CTCGTGCCGGTCACGCCGCTCACGCCGATGCGTGACGGCGAGACGAGCGAGCTGGCGCAGGTGCGCTTCCGCACGGTCGG CGACATCAGCTGCACGTGCCCGGTCGAGAGCGACGCGGACGACGTCGAGAAGATCATCGCCGAGACGGCGGTGACCGAGA TCACCGAGCGCGGCGCGACCCGGATGGACGACCAGGCCTCCGAAGCCGCGATGGAACAGCGCAAGAAGCAAGGTTATTTC TGA
Upstream 100 bases:
>100_bases GCCGAAGCCGGCGCCGCGCACTGAACGCCCGATAAGAAACTGAATATTGCGCCGCCTGCGACAGCGGGCGGCACGAACCC AGAAGAGAAGGACTGAAATC
Downstream 100 bases:
>100_bases AGCACACGAGGACATTCACATCATGAGCATCATCGAGAACACCGAAGACCTCGGCGTGTTGCGTTTCATCACCGCGGGCA GCGTCGACGACGGCAAGAGC
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSTTLEQSAFAPPTGADSRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRKTTLPFPLV HIDTGHNYEEVIDFRDRRAQELGAELVVGHVEDSIKRGTVVLRRETDSRNAAQAVTLLETIEQHGYTALIGGARRDEEKA RAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHKGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL LVPVTPLTPMRDGETSELAQVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQASEAAMEQRKKQGYF
Sequences:
>Translated_320_residues MSTTLEQSAFAPPTGADSRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRKTTLPFPLV HIDTGHNYEEVIDFRDRRAQELGAELVVGHVEDSIKRGTVVLRRETDSRNAAQAVTLLETIEQHGYTALIGGARRDEEKA RAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHKGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL LVPVTPLTPMRDGETSELAQVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQASEAAMEQRKKQGYF >Mature_319_residues STTLEQSAFAPPTGADSRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRKTTLPFPLVH IDTGHNYEEVIDFRDRRAQELGAELVVGHVEDSIKRGTVVLRRETDSRNAAQAVTLLETIEQHGYTALIGGARRDEEKAR AKERIFSFRDEFGQWDPKAQRPELWSLYNARLHKGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGLL VPVTPLTPMRDGETSELAQVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQASEAAMEQRKKQGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=304, Percent_Identity=46.3815789473684, Blast_Score=268, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 36139; Mature: 36008
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLEQSAFAPPTGADSRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHH ALKAFGLGANRKTTLPFPLVHIDTGHNYEEVIDFRDRRAQELGAELVVGHVEDSIKRGTV HHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCHHHEEHHHHHHHCCCEE VLRRETDSRNAAQAVTLLETIEQHGYTALIGGARRDEEKARAKERIFSFRDEFGQWDPKA EEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC QRPELWSLYNARLHKGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC LVPVTPLTPMRDGETSELAQVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGAT EEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC RMDDQASEAAMEQRKKQGYF CCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure STTLEQSAFAPPTGADSRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHH ALKAFGLGANRKTTLPFPLVHIDTGHNYEEVIDFRDRRAQELGAELVVGHVEDSIKRGTV HHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCHHHEEHHHHHHHCCCEE VLRRETDSRNAAQAVTLLETIEQHGYTALIGGARRDEEKARAKERIFSFRDEFGQWDPKA EEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC QRPELWSLYNARLHKGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC LVPVTPLTPMRDGETSELAQVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGAT EEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC RMDDQASEAAMEQRKKQGYF CCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA