Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690448

Identifier: 116690448

GI number: 116690448

Start: 2695761

End: 2696570

Strand: Direct

Name: 116690448

Synonym: Bcen2424_2428

Alternate gene names: NA

Gene position: 2695761-2696570 (Clockwise)

Preceding gene: 116690446

Following gene: 116690449

Centisome position: 77.38

GC content: 73.95

Gene sequence:

>810_bases
ATGAACCAGCCGTCCTCCGCCCCCGTCCCGCCGCTCGACGCCACGCCCGCCCGCGCGCTCGGCGAATTCATCCGCGCCCA
CCGCGAGCGGCTGTCGCCGCAGGCGGTCGGCCTGCCGCCCGGCCCGCGCCGCCGCACGCCGGGGCTGCGGCGCGAGGAAG
TCGCGCAACTGTGCGGCGTGAGCCCGACCTGGTACACGTGGATCGAACAGGGCCGGCCCGTGTCGGCCTCCGCCGACGCG
CTCGCCCGGATCGCCGTCGCGCTACAGCTGTCGAAGGCCGAGCGCGCGTACCTGTTCGAGCTGGCCGCGCAGCGCGACCC
GGCCGAGCCCGACGTCGCGGGCGGCGACCTGCCGCCGACGCTCGCCGCCACCGTCGCGGCCATCGCGACGCCCGCCTACG
TGCTCGATCGCCAATGGAACGCGCTCGCGTGGAACGCGCCGGCCGCCGCGCTCTTTTCCGGCTGGCTCGACGACGAGCAC
GACCGCAACCTGCTGCGCTTCACGTTCATGTCGCCGGCCGCACGCACGCTGATCGTCGACTGGGACACCCGCGCGCGGCG
GCTCGCGGCCGAATTCCGCGCCGATGCGATCCGCCACCTGACCGACGCGCCGACGCGCGCGCTGATCGACGCGCTGACCA
CCGGCAGCGACGCGTTCGCACAGTACTGGGCGTCGCAGGACGTGTTCGAGCGCGAAGGCGGCCTGCGCGAATTCGACCAT
CCGGCCGATGGCCGTCTGGTGTACCAGCAGATCACGCTGAAGCCCACGCACCGCGAGGACCTGAAGCTCGTCGTGCTGGT
GCGCGACTGA

Upstream 100 bases:

>100_bases
GCTTGTACCAGTACAAGTTAAGTAGTTATTCTGGTATTCGATCCACCTGTCTGATCGTTCGATCGTTGCCGCGTTTTCGC
TTCCACTTCGCCGTTTCCGC

Downstream 100 bases:

>100_bases
GCGCGCCGGCCCCCGCGCCGGCGGCGGTCGGCCGGCCCGCGAATGTTAGAATCGCGGGATTCCCTCGGCGGCTCACGGCC
GCCCAACTCCCCTTCGAAGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain Protein; XRE Family Transcription Regulator Protein; Helix-Turn-Helix Domain Containing Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNQPSSAPVPPLDATPARALGEFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGRPVSASADA
LARIAVALQLSKAERAYLFELAAQRDPAEPDVAGGDLPPTLAATVAAIATPAYVLDRQWNALAWNAPAAALFSGWLDDEH
DRNLLRFTFMSPAARTLIVDWDTRARRLAAEFRADAIRHLTDAPTRALIDALTTGSDAFAQYWASQDVFEREGGLREFDH
PADGRLVYQQITLKPTHREDLKLVVLVRD

Sequences:

>Translated_269_residues
MNQPSSAPVPPLDATPARALGEFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGRPVSASADA
LARIAVALQLSKAERAYLFELAAQRDPAEPDVAGGDLPPTLAATVAAIATPAYVLDRQWNALAWNAPAAALFSGWLDDEH
DRNLLRFTFMSPAARTLIVDWDTRARRLAAEFRADAIRHLTDAPTRALIDALTTGSDAFAQYWASQDVFEREGGLREFDH
PADGRLVYQQITLKPTHREDLKLVVLVRD
>Mature_269_residues
MNQPSSAPVPPLDATPARALGEFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGRPVSASADA
LARIAVALQLSKAERAYLFELAAQRDPAEPDVAGGDLPPTLAATVAAIATPAYVLDRQWNALAWNAPAAALFSGWLDDEH
DRNLLRFTFMSPAARTLIVDWDTRARRLAAEFRADAIRHLTDAPTRALIDALTTGSDAFAQYWASQDVFEREGGLREFDH
PADGRLVYQQITLKPTHREDLKLVVLVRD

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29686; Mature: 29686

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPSSAPVPPLDATPARALGEFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
SPTWYTWIEQGRPVSASADALARIAVALQLSKAERAYLFELAAQRDPAEPDVAGGDLPPT
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
LAATVAAIATPAYVLDRQWNALAWNAPAAALFSGWLDDEHDRNLLRFTFMSPAARTLIVD
HHHHHHHHHCHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEE
WDTRARRLAAEFRADAIRHLTDAPTRALIDALTTGSDAFAQYWASQDVFEREGGLREFDH
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCCCCCC
PADGRLVYQQITLKPTHREDLKLVVLVRD
CCCCEEEEEEEEECCCCCCCCEEEEEEEC
>Mature Secondary Structure
MNQPSSAPVPPLDATPARALGEFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
SPTWYTWIEQGRPVSASADALARIAVALQLSKAERAYLFELAAQRDPAEPDVAGGDLPPT
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
LAATVAAIATPAYVLDRQWNALAWNAPAAALFSGWLDDEHDRNLLRFTFMSPAARTLIVD
HHHHHHHHHCHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEE
WDTRARRLAAEFRADAIRHLTDAPTRALIDALTTGSDAFAQYWASQDVFEREGGLREFDH
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCCCCCC
PADGRLVYQQITLKPTHREDLKLVVLVRD
CCCCEEEEEEEEECCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA