Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690418

Identifier: 116690418

GI number: 116690418

Start: 2659461

End: 2661218

Strand: Reverse

Name: 116690418

Synonym: Bcen2424_2398

Alternate gene names: NA

Gene position: 2661218-2659461 (Counterclockwise)

Preceding gene: 116690420

Following gene: 116690417

Centisome position: 76.39

GC content: 65.93

Gene sequence:

>1758_bases
ATGAACGTCGGATTCTTCAATCCGAACCGGACCGCCAACGCATCCGCGTGGCGCGTGTTGCCGAACCGGTGGGACTTCAT
CGCATTTCCGCTGATCATCTGCCTGATCGCGATGGCGGTGGTCGGCTTTCACGAAACGATGGCGCCGATCGGCGTGCTGC
AGACGCAGAAGATCTCGCTCGATCCGTCGAACCTGCCCGAATACGCGCTGCGCACCACGCTGCGGATGCTCGCCGCGATG
GTCGCGTCGCTGGCGTTCACGCTCGTCTACGGCACGCTCGCGGCCAAGAGCCGCCGCGCGGGCATGGTGCTGATCCCGAT
CCTCGACATCCTGCAGTCGGTGCCGGTGCTCGGCTTCATCTCGTTTACGGTCACGTTCTTCCTCGCGCTGTTCCCGAGCC
GCGTGCTCGGCGCCGAGCTGGCCGCGATCTTCGCGATCTTCACGAGCCAGGCGTGGAACATGACGTTCAGCTTCTACCAG
TCGCTGCGCACGGTGCCGCGCGACCTGGACGAAGTGTCGCGCGGCTTCCACCTGACGTCCTGGCAGCGCTTCTGGAAGCT
CGAAGTGCCGTTCTCGATGCCGGGCCTGATCTGGAACATGATGATGTCGATGTCGGGCGGCTGGTTCTTCGTCGTCGCGT
CGGAGGCGATCACCGTCGGCAACCAGACGATCACGCTGCCGGGCATCGGCGCGTATCTCGCGCAGGCGATCTCCGACAAG
AACTTCGGCGCGATCGGCTGGGTGATCCTGACGATGACGGTCGTGATCCTCGCGTATGACCAGCTCCTGTTCCGCCCGCT
CATCGCGTGGGCCGACAAGTTCCGGATGGAGAACACCGCGTCGGGCGATGCGCCGCAATCGTGGCTGCTCGACCTCGTGC
GCCGCACGCGGCTGATCCATCAGTTGCTCGTGCCGGCCGGCTGGTTCTTCGCGAAGGCCGCTCGGATTCCGCTGCGCCTG
CCGCTGTCGGGCGCGATGCGTTTCACGCTGCCGAAAGTCGAGAAGAAGGCGTCGCGCACGGTCGACATCGCGTGGGCCGG
GCTCGTGCTGATCGGCACGGCCTATATCGTGTGGCGCGTCGTCAGCTTCGTCGCGACCGGCGTGACGATGGCCGAGGTCG
GCCACGTACTCGTGCTCGGGCTCATCACGCTGCTGCGCGTGGTCGTGCTGATCTCGATCGCGTCGGTGATCTGGGTGCCG
ATCGGCGTGTGGGTCGGGCTGCGCCCGAAGCTGGCCGAGAAGCTGCAGCCGCTCGCGCAGTTCCTCGCCGCGTTCCCGGC
GAACCTGCTGTTCCCGGTGTTCGTGATCGTGATCGCGCGCTTCCACCTGAACGCGGACATCTGGCTGTCGCCGCTGATCG
TGCTCGGCACGCAGTGGTATATCCTGTTCAACGTGATCGCCGGCGCGACGTCCTACCCGAACGACTATCGCGAAGCGGCG
ACCAACTTCCGTATCCGCGGCTGGCAGTGGTGGCGCCAGGCGATCCTGCCCGGCATCTTCCCGTACTACGTGACGGGCGC
GATCACCGCATCGGGCGGCGCGTGGAACGCGAGCATCGTGTCGGAAGCCGTGCAGTGGGGCAGCACCCGAATCGAGGCGC
ACGGCCTCGGCGCCTACATCGCGCAGACCACCGCCGCCGGCGATTTTCCGAAGATCATCCTGGGCATCGCCGTGATGTCC
CTGTTCGTCACCCTGTTCAACCGCCTGCTGTGGCGCCCGCTGTATGCCTTCGCCGAAGCGAAGCTGCGGCTCGACTGA

Upstream 100 bases:

>100_bases
GCGCGGCATCGCCAGTCAATCGAATTACCGCGCCCGTGCGCTTTGCCATGAATCAACATCGACTGCCGGCTTCGTTCGGC
CTTACCGGGGAGGGCGCCTG

Downstream 100 bases:

>100_bases
GACCGATTGAGAGCGAAACGCGATGCACAATCCGAATGCTGTAAACGCCCCCGTCCAGACGTCCCAGCCGCCGCGCCTCG
GTGAAGAAATCCTGCGCGTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Nitrate Permease; ABC Transporter; ABC Anion Transporter; ABC-Type Anion Transport System Permease Component; ABC Transport System Permease Protein; Transmembrane ABC Transporter Protein; Anion Transporter Permease Protein; Nitrate Transport System Permease Protein; Nitrate ABC Transporter Permease Protein; Anion ABC Transporter Permease; Taurine ABC Transporter Permease Protein; Nitrate ABC Transporter Permease; Sugar ABC Transporter; ABC Transporter Inner Membrane Subunit; Sugar ABC Transporter 1 Permease Protein; ABC Transporter Transmembrane Permease Protein; Sulfonate Transport Permease Protein; Nitrate Transport System Permease; ABC-Type Anion Transport System; ABC-Type Nitrate Transport Permease

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MNVGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRMLAAM
VASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQ
SLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDK
NFGAIGWVILTMTVVILAYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIPLRL
PLSGAMRFTLPKVEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTMAEVGHVLVLGLITLLRVVVLISIASVIWVP
IGVWVGLRPKLAEKLQPLAQFLAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAA
TNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTAAGDFPKIILGIAVMS
LFVTLFNRLLWRPLYAFAEAKLRLD

Sequences:

>Translated_585_residues
MNVGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRMLAAM
VASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQ
SLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDK
NFGAIGWVILTMTVVILAYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIPLRL
PLSGAMRFTLPKVEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTMAEVGHVLVLGLITLLRVVVLISIASVIWVP
IGVWVGLRPKLAEKLQPLAQFLAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAA
TNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTAAGDFPKIILGIAVMS
LFVTLFNRLLWRPLYAFAEAKLRLD
>Mature_585_residues
MNVGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISLDPSNLPEYALRTTLRMLAAM
VASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFISFTVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQ
SLRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDK
NFGAIGWVILTMTVVILAYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIHQLLVPAGWFFAKAARIPLRL
PLSGAMRFTLPKVEKKASRTVDIAWAGLVLIGTAYIVWRVVSFVATGVTMAEVGHVLVLGLITLLRVVVLISIASVIWVP
IGVWVGLRPKLAEKLQPLAQFLAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAA
TNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTRIEAHGLGAYIAQTTAAGDFPKIILGIAVMS
LFVTLFNRLLWRPLYAFAEAKLRLD

Specific function: Unknown

COG id: COG4986

COG function: function code P; ABC-type anion transport system, duplicated permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64938; Mature: 64938

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISL
CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
DPSNLPEYALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHH
SFTVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
WQRFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDK
HHHHEEEECCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCEEECCCHHHHHHHHHCCC
NFGAIGWVILTMTVVILAYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
QLLVPAGWFFAKAARIPLRLPLSGAMRFTLPKVEKKASRTVDIAWAGLVLIGTAYIVWRV
HHHHCCHHHHHHHCCCCEECCCCCCCEECCHHHHHHHCCEEHHHHHHHHHHHHHHHHHHH
VSFVATGVTMAEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQ
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FLAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAA
HHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTRIEAHGLGAYI
HCCEECHHHHHHHHHHCCHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCEEECCCCHHHH
AQTTAAGDFPKIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRLD
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVGFFNPNRTANASAWRVLPNRWDFIAFPLIICLIAMAVVGFHETMAPIGVLQTQKISL
CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
DPSNLPEYALRTTLRMLAAMVASLAFTLVYGTLAAKSRRAGMVLIPILDILQSVPVLGFI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHH
SFTVTFFLALFPSRVLGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
WQRFWKLEVPFSMPGLIWNMMMSMSGGWFFVVASEAITVGNQTITLPGIGAYLAQAISDK
HHHHEEEECCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCEEECCCHHHHHHHHHCCC
NFGAIGWVILTMTVVILAYDQLLFRPLIAWADKFRMENTASGDAPQSWLLDLVRRTRLIH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
QLLVPAGWFFAKAARIPLRLPLSGAMRFTLPKVEKKASRTVDIAWAGLVLIGTAYIVWRV
HHHHCCHHHHHHHCCCCEECCCCCCCEECCHHHHHHHCCEEHHHHHHHHHHHHHHHHHHH
VSFVATGVTMAEVGHVLVLGLITLLRVVVLISIASVIWVPIGVWVGLRPKLAEKLQPLAQ
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FLAAFPANLLFPVFVIVIARFHLNADIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAA
HHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TNFRIRGWQWWRQAILPGIFPYYVTGAITASGGAWNASIVSEAVQWGSTRIEAHGLGAYI
HCCEECHHHHHHHHHHCCHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCEEECCCCHHHH
AQTTAAGDFPKIILGIAVMSLFVTLFNRLLWRPLYAFAEAKLRLD
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA