Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yebQ [H]

Identifier: 116690411

GI number: 116690411

Start: 2652934

End: 2654301

Strand: Direct

Name: yebQ [H]

Synonym: Bcen2424_2391

Alternate gene names: 116690411

Gene position: 2652934-2654301 (Clockwise)

Preceding gene: 116690410

Following gene: 116690415

Centisome position: 76.15

GC content: 70.32

Gene sequence:

>1368_bases
ATGAACGCCGATACCGGCCTGCCGCTTCCGCAACGCTACTGGGCGATCGTCTGCGTCGCCCTGGGCATCACGCTCGCCGT
GCTCGACGGCGCCATCGCCAACGTCGCCTTGCCGACCATCGCACGCGACCTGCACGCGTCCGACGCCGCGTCGATCTGGA
TCGTCAACGCGTACCAGCTCGCAGTCACGATCACGCTGCTGCCGCTCGCGTCGCTCGGCGAACGCATCGGCTATCGCCGC
ATCTACATCGCCGGGCTCGCGCTGTTCACCGCGGCGTCGCTCGGCTGCGCGCTGGCCGGCTCACTGCCGATGCTGGCCGT
GATGCGCGTGATCCAGGGGTTCGGCGCGGCCGGCATCATGAGCGTCAACGCGGCGCTCGTGCGGATGATCTACCCGTCGT
CGTTGCTCGGGCGCGGGCTGTCGATCAACGCGATGGTAGTCGCGCTGTCGTCGGCGATCGGGCCGACGGTCGCATCCGCG
ATCCTGTCGTTCGCGTCGTGGCCGTGGCTGTTCGCGGTCAACGTGCCGATCGGCATCGCGGCCGTGCTCGGCAGCGTGCG
GGCGCTGCCGGCCAACCCGCTGCACGACGCGCCGTACGACTTCCCGAGCGCGCTGATGAACGCATGCGTGTTCGGCCTGC
TGATCACGGCCGTCGACGGGCTCGGTCACGGCGAAGGTCATGCGTACGTCGCGGCCGAACTGGCCGTCGCGTTCGTGGTC
GGCTACTTCTTCGTGAAGCGTCAGTTGTCGCAGCCGGCGCCGCTCCTGCCCGTCGACCTGATGCGCATCCCGATGTTCGC
GCTGTCGGTCTACACGTCGACGGCGTCGTTCACGTCGCAGATGCTCGCGTTCGTCGCGCTGCCGTTCTGGCTGCAGAATT
CGCTCGGTTTCTCGCAGGTCGAGACGGGCCTCTACATGACGCCATGGCCGCTCGTGATCGTGTTCGCCGCGCCGCTCGCG
GGCGTGCTGTCGGACCGCTATTCGGCCGGCATTCTCGGCGGGATCGGGCTTGCACTGTTCGCCGCCGGGCTGCTGTCGCT
CGCGACGATCGGTGCACACCCGGGCACGGTCGACATCGTGTGGCGGATGGCGCTGTGCGGCGCGGGCTTCGGGCTGTTCC
AGTCGCCGAACAACCGCGCGATGCTGTCGTCGGCGCCGCGCGAGCGCAGCGGCGGCGCCGGCGGCATGTTGAGCACCGCG
CGCCTGACGGGCCAGACGCTCGGCGCGGCGCTCGTCGCGCTGATTTTCGGGCTCGCGCCCGACCGCGGGCCGACGATCGC
GCTCTATGTCGCCACGGTGTTCGCGGCGGTGGCCGCGGTCGTCAGCCTGCTGCGCATCGCGTCGCCGCGGCCGGACACGG
CGGCCTGA

Upstream 100 bases:

>100_bases
CAGCCGCGCCGGCCGGGCCGTTCATCGCCGCCACCCTTGCACATGGTTGCGCACGCAACCTGCAACCGGGCGCGCGGACA
ACCCTGCTCTCGCTCCCGTC

Downstream 100 bases:

>100_bases
CACCCGCCGCCGTGCGCCACACCCGCGGCGGGCATCAGGCCGCGTCGAGCGTGTCCATCACGAAGCGCACGCGCGCCTTC
ACGCTCACGCGCGGCAACTC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MNADTGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLHASDAASIWIVNAYQLAVTITLLPLASLGERIGYRR
IYIAGLALFTAASLGCALAGSLPMLAVMRVIQGFGAAGIMSVNAALVRMIYPSSLLGRGLSINAMVVALSSAIGPTVASA
ILSFASWPWLFAVNVPIGIAAVLGSVRALPANPLHDAPYDFPSALMNACVFGLLITAVDGLGHGEGHAYVAAELAVAFVV
GYFFVKRQLSQPAPLLPVDLMRIPMFALSVYTSTASFTSQMLAFVALPFWLQNSLGFSQVETGLYMTPWPLVIVFAAPLA
GVLSDRYSAGILGGIGLALFAAGLLSLATIGAHPGTVDIVWRMALCGAGFGLFQSPNNRAMLSSAPRERSGGAGGMLSTA
RLTGQTLGAALVALIFGLAPDRGPTIALYVATVFAAVAAVVSLLRIASPRPDTAA

Sequences:

>Translated_455_residues
MNADTGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLHASDAASIWIVNAYQLAVTITLLPLASLGERIGYRR
IYIAGLALFTAASLGCALAGSLPMLAVMRVIQGFGAAGIMSVNAALVRMIYPSSLLGRGLSINAMVVALSSAIGPTVASA
ILSFASWPWLFAVNVPIGIAAVLGSVRALPANPLHDAPYDFPSALMNACVFGLLITAVDGLGHGEGHAYVAAELAVAFVV
GYFFVKRQLSQPAPLLPVDLMRIPMFALSVYTSTASFTSQMLAFVALPFWLQNSLGFSQVETGLYMTPWPLVIVFAAPLA
GVLSDRYSAGILGGIGLALFAAGLLSLATIGAHPGTVDIVWRMALCGAGFGLFQSPNNRAMLSSAPRERSGGAGGMLSTA
RLTGQTLGAALVALIFGLAPDRGPTIALYVATVFAAVAAVVSLLRIASPRPDTAA
>Mature_455_residues
MNADTGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLHASDAASIWIVNAYQLAVTITLLPLASLGERIGYRR
IYIAGLALFTAASLGCALAGSLPMLAVMRVIQGFGAAGIMSVNAALVRMIYPSSLLGRGLSINAMVVALSSAIGPTVASA
ILSFASWPWLFAVNVPIGIAAVLGSVRALPANPLHDAPYDFPSALMNACVFGLLITAVDGLGHGEGHAYVAAELAVAFVV
GYFFVKRQLSQPAPLLPVDLMRIPMFALSVYTSTASFTSQMLAFVALPFWLQNSLGFSQVETGLYMTPWPLVIVFAAPLA
GVLSDRYSAGILGGIGLALFAAGLLSLATIGAHPGTVDIVWRMALCGAGFGLFQSPNNRAMLSSAPRERSGGAGGMLSTA
RLTGQTLGAALVALIFGLAPDRGPTIALYVATVFAAVAAVVSLLRIASPRPDTAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=452, Percent_Identity=59.7345132743363, Blast_Score=512, Evalue=1e-146,
Organism=Escherichia coli, GI1790195, Length=292, Percent_Identity=30.4794520547945, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1788392, Length=306, Percent_Identity=30.3921568627451, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1789042, Length=412, Percent_Identity=24.2718446601942, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788710, Length=416, Percent_Identity=24.5192307692308, Blast_Score=99, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6325455, Length=157, Percent_Identity=30.5732484076433, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46964; Mature: 46964

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNADTGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLHASDAASIWIVNAYQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH
AVTITLLPLASLGERIGYRRIYIAGLALFTAASLGCALAGSLPMLAVMRVIQGFGAAGIM
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH
SVNAALVRMIYPSSLLGRGLSINAMVVALSSAIGPTVASAILSFASWPWLFAVNVPIGIA
HHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH
AVLGSVRALPANPLHDAPYDFPSALMNACVFGLLITAVDGLGHGEGHAYVAAELAVAFVV
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GYFFVKRQLSQPAPLLPVDLMRIPMFALSVYTSTASFTSQMLAFVALPFWLQNSLGFSQV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ETGLYMTPWPLVIVFAAPLAGVLSDRYSAGILGGIGLALFAAGLLSLATIGAHPGTVDIV
CCCCEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
WRMALCGAGFGLFQSPNNRAMLSSAPRERSGGAGGMLSTARLTGQTLGAALVALIFGLAP
HHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DRGPTIALYVATVFAAVAAVVSLLRIASPRPDTAA
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNADTGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLHASDAASIWIVNAYQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH
AVTITLLPLASLGERIGYRRIYIAGLALFTAASLGCALAGSLPMLAVMRVIQGFGAAGIM
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH
SVNAALVRMIYPSSLLGRGLSINAMVVALSSAIGPTVASAILSFASWPWLFAVNVPIGIA
HHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH
AVLGSVRALPANPLHDAPYDFPSALMNACVFGLLITAVDGLGHGEGHAYVAAELAVAFVV
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GYFFVKRQLSQPAPLLPVDLMRIPMFALSVYTSTASFTSQMLAFVALPFWLQNSLGFSQV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ETGLYMTPWPLVIVFAAPLAGVLSDRYSAGILGGIGLALFAAGLLSLATIGAHPGTVDIV
CCCCEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
WRMALCGAGFGLFQSPNNRAMLSSAPRERSGGAGGMLSTARLTGQTLGAALVALIFGLAP
HHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DRGPTIALYVATVFAAVAAVVSLLRIASPRPDTAA
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]