| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690410
Identifier: 116690410
GI number: 116690410
Start: 2652371
End: 2652751
Strand: Direct
Name: 116690410
Synonym: Bcen2424_2390
Alternate gene names: NA
Gene position: 2652371-2652751 (Clockwise)
Preceding gene: 116690408
Following gene: 116690411
Centisome position: 76.13
GC content: 67.98
Gene sequence:
>381_bases ATGCAGCCCGAAACCGCCCGCCGTTTCGATACCGAATTCGCACCGCGCATCGCGCAGGCGATCGCCGCGTTCTTCGCGGA ACACGTGCAGACCGACGTCGTCCCCTATGGCGGGCACGGACACCCGACGCGCGTCCAGATCCGCAGCGCGCCGCACGAGC ACGTGAGCGGCTTCGTGCATCCGCTGAATCTCGAGCTGACGTGGGACACCGACGAGATCGAGCGGCTGATGGAACCGGAC GGCCGGGAGCGCTTCGAGCACTATCTCGCCGCGCTGCCGAGAAAGCTCGGCGCATGGCAAAGCGCGCGCGACATCGATCT CGCGTCGCGTACGCAGGCCGAGCCGCTCGTGCGGCTCGGCGGTCTCGACTTCGAAGGCTGA
Upstream 100 bases:
>100_bases GTAATAGATGCAGCAAGTGGTAACGCGCGATTACCGGTATCGCTCGCGCCGAAACGCGTCGTCGCCGTGCTACGATTTTC GGCACACAGGAGACGCCTTC
Downstream 100 bases:
>100_bases ATGCACACGCCAGCCGGCCAGCGCGCGGCTTGGCGTCGCGCGATGCGGCCCGGTGATACACTCGACCGGCCCCGCGCCGG TGCAGCCGCGCCGGCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MQPETARRFDTEFAPRIAQAIAAFFAEHVQTDVVPYGGHGHPTRVQIRSAPHEHVSGFVHPLNLELTWDTDEIERLMEPD GRERFEHYLAALPRKLGAWQSARDIDLASRTQAEPLVRLGGLDFEG
Sequences:
>Translated_126_residues MQPETARRFDTEFAPRIAQAIAAFFAEHVQTDVVPYGGHGHPTRVQIRSAPHEHVSGFVHPLNLELTWDTDEIERLMEPD GRERFEHYLAALPRKLGAWQSARDIDLASRTQAEPLVRLGGLDFEG >Mature_126_residues MQPETARRFDTEFAPRIAQAIAAFFAEHVQTDVVPYGGHGHPTRVQIRSAPHEHVSGFVHPLNLELTWDTDEIERLMEPD GRERFEHYLAALPRKLGAWQSARDIDLASRTQAEPLVRLGGLDFEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14268; Mature: 14268
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPETARRFDTEFAPRIAQAIAAFFAEHVQTDVVPYGGHGHPTRVQIRSAPHEHVSGFVH CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHCCCCC PLNLELTWDTDEIERLMEPDGRERFEHYLAALPRKLGAWQSARDIDLASRTQAEPLVRLG CCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHC GLDFEG CCCCCC >Mature Secondary Structure MQPETARRFDTEFAPRIAQAIAAFFAEHVQTDVVPYGGHGHPTRVQIRSAPHEHVSGFVH CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHCCCCC PLNLELTWDTDEIERLMEPDGRERFEHYLAALPRKLGAWQSARDIDLASRTQAEPLVRLG CCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHC GLDFEG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA