| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is lysN [H]
Identifier: 116690371
GI number: 116690371
Start: 2613040
End: 2614221
Strand: Direct
Name: lysN [H]
Synonym: Bcen2424_2351
Alternate gene names: 116690371
Gene position: 2613040-2614221 (Clockwise)
Preceding gene: 116690370
Following gene: 116690372
Centisome position: 75.0
GC content: 69.71
Gene sequence:
>1182_bases ATGAATCCGAGCGACCTGCATCCGCCGCACTGGCAGCTTTCCGAACGCGCCCGCAAGCTGACGAGCTCGGCGATCCGCGA GATCCTGAAGGTCACGGAACGCCCCGAGGTCATCTCGTTCGCCGGCGGCCTGCCCGCCCCCGCGACGTTCCCGGCCGAAC GCATGCGCGCCGCCGCCGACCGCGTGCTGCGCGATGCGCCGGCCGCCGCACTCCAGTACAGCGCGACCGAAGGCTACCTG CCGCTGCGCGAGTGGATCGCCGAGCGCTACAGCGTGCGCGTGTCGCAGGTGCTGATCACGACCGGCTCGCAGCAGGCGCT CGACCTGCTCGGCAAGGCGCTGATCGACCCGAACAGCCCGATCCTCGTCGAAACCCCGACCTACCTCGGCGCGCTGCAAT CGTTCTCGCTGTACGAGCCGCGCTACGTGCAGGTGCCGACCGACGAGCAGGGCCTGCTGCCGGAAGGCCTCACGCCCGAA CTCACGCAAGGCGCGCGGCTGCTGTACGCGCAGCCGAACTTCCAGAACCCGACCGGCCGCCGCCTGCCCGTCGAGCGCCG CCGTGCGCTCGCCGCGTTCGCGCAGACGAGCCCGTTCCCGGTGCTGGAGGACGATCCGTACGGCGCGCTGAACTACCAGG GCGAGCCGCTGCCGACGATGCTGTCGATGGCGCCCGACCACGTCGTGCATCTCGGCACGTTCTCGAAGGTGCTCGCGCCG GGCCTGCGGATCGGCTACATCATCGCGCCCGAGGAACTCCACTTCAAGCTCGTGCAGGCCAAGCAGGCCACCGACCTGCA CACGCCGACGCTCACGCAGCGCATCGCGCACGAAGTGATCAAGGACGGCTTCCTCGACGAGCACATCCCGACGATCCGCG AGCTGTACAGCGCGCAGTGCGACGCGATGCTCGGCGCGCTCACGCGCCACATGCCGGCAGGCGTCACGTGGAACCGCCCG GAAGGCGGGATGTTCATCTGGGTGAACCTGCCCGCGCAGATCGACAGCATGAAGCTGCTCGCCGCGGCCGTCGACAACCA CGTCGCCTTCGTGCCGGGCGCGCCGTTCTTCGCGGAAAACGCGCAGCAGAACACGCTGCGCCTGTCGTTCGTGACGGTGC CGCCCGAGAAGATCGAGGAAGGCGTCGCGCGCCTCGGCAAGCTGCTGCGCGAGCGCCTCTGA
Upstream 100 bases:
>100_bases CGAAGGCGCCATCGTGCTCGCGCTCGCCCACCCGGCGGCGTCGAAGCGATCCGCCTGATCGACCTTTCTTGACTGACCAC GATATCCGAACGAGGAGACT
Downstream 100 bases:
>100_bases TCCCCTTTTTCCTGTCACGACTCTCTACGAGGAATCGAACACATGGCTAACGTCTACGACAAACTGAAGTCGCTCGGCAT CGAGCTCCCGACCGCCGGCG
Product: aminotransferase, class I and II
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MNPSDLHPPHWQLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMRAAADRVLRDAPAAALQYSATEGYL PLREWIAERYSVRVSQVLITTGSQQALDLLGKALIDPNSPILVETPTYLGALQSFSLYEPRYVQVPTDEQGLLPEGLTPE LTQGARLLYAQPNFQNPTGRRLPVERRRALAAFAQTSPFPVLEDDPYGALNYQGEPLPTMLSMAPDHVVHLGTFSKVLAP GLRIGYIIAPEELHFKLVQAKQATDLHTPTLTQRIAHEVIKDGFLDEHIPTIRELYSAQCDAMLGALTRHMPAGVTWNRP EGGMFIWVNLPAQIDSMKLLAAAVDNHVAFVPGAPFFAENAQQNTLRLSFVTVPPEKIEEGVARLGKLLRERL
Sequences:
>Translated_393_residues MNPSDLHPPHWQLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMRAAADRVLRDAPAAALQYSATEGYL PLREWIAERYSVRVSQVLITTGSQQALDLLGKALIDPNSPILVETPTYLGALQSFSLYEPRYVQVPTDEQGLLPEGLTPE LTQGARLLYAQPNFQNPTGRRLPVERRRALAAFAQTSPFPVLEDDPYGALNYQGEPLPTMLSMAPDHVVHLGTFSKVLAP GLRIGYIIAPEELHFKLVQAKQATDLHTPTLTQRIAHEVIKDGFLDEHIPTIRELYSAQCDAMLGALTRHMPAGVTWNRP EGGMFIWVNLPAQIDSMKLLAAAVDNHVAFVPGAPFFAENAQQNTLRLSFVTVPPEKIEEGVARLGKLLRERL >Mature_393_residues MNPSDLHPPHWQLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMRAAADRVLRDAPAAALQYSATEGYL PLREWIAERYSVRVSQVLITTGSQQALDLLGKALIDPNSPILVETPTYLGALQSFSLYEPRYVQVPTDEQGLLPEGLTPE LTQGARLLYAQPNFQNPTGRRLPVERRRALAAFAQTSPFPVLEDDPYGALNYQGEPLPTMLSMAPDHVVHLGTFSKVLAP GLRIGYIIAPEELHFKLVQAKQATDLHTPTLTQRIAHEVIKDGFLDEHIPTIRELYSAQCDAMLGALTRHMPAGVTWNRP EGGMFIWVNLPAQIDSMKLLAAAVDNHVAFVPGAPFFAENAQQNTLRLSFVTVPPEKIEEGVARLGKLLRERL
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=410, Percent_Identity=30, Blast_Score=181, Evalue=9e-46, Organism=Homo sapiens, GI33469970, Length=410, Percent_Identity=30, Blast_Score=181, Evalue=9e-46, Organism=Escherichia coli, GI1787710, Length=381, Percent_Identity=28.8713910761155, Blast_Score=157, Evalue=9e-40, Organism=Escherichia coli, GI1790797, Length=336, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1788722, Length=345, Percent_Identity=25.7971014492754, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321236, Length=485, Percent_Identity=24.5360824742268, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6321000, Length=264, Percent_Identity=28.4090909090909, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6321929, Length=489, Percent_Identity=24.1308793456033, Blast_Score=89, Evalue=8e-19, Organism=Drosophila melanogaster, GI21356535, Length=392, Percent_Identity=26.7857142857143, Blast_Score=132, Evalue=5e-31,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 43448; Mature: 43448
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSDLHPPHWQLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMRAAAD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHH RVLRDAPAAALQYSATEGYLPLREWIAERYSVRVSQVLITTGSQQALDLLGKALIDPNSP HHHHHCCHHHHEECCCCCCCHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHCCCCCC ILVETPTYLGALQSFSLYEPRYVQVPTDEQGLLPEGLTPELTQGARLLYAQPNFQNPTGR EEEECCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCC RLPVERRRALAAFAQTSPFPVLEDDPYGALNYQGEPLPTMLSMAPDHVVHLGTFSKVLAP CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEHHHHHHHHCC GLRIGYIIAPEELHFKLVQAKQATDLHTPTLTQRIAHEVIKDGFLDEHIPTIRELYSAQC CCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DAMLGALTRHMPAGVTWNRPEGGMFIWVNLPAQIDSMKLLAAAVDNHVAFVPGAPFFAEN HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHCC AQQNTLRLSFVTVPPEKIEEGVARLGKLLRERL CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPSDLHPPHWQLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMRAAAD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHH RVLRDAPAAALQYSATEGYLPLREWIAERYSVRVSQVLITTGSQQALDLLGKALIDPNSP HHHHHCCHHHHEECCCCCCCHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHCCCCCC ILVETPTYLGALQSFSLYEPRYVQVPTDEQGLLPEGLTPELTQGARLLYAQPNFQNPTGR EEEECCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCC RLPVERRRALAAFAQTSPFPVLEDDPYGALNYQGEPLPTMLSMAPDHVVHLGTFSKVLAP CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEHHHHHHHHCC GLRIGYIIAPEELHFKLVQAKQATDLHTPTLTQRIAHEVIKDGFLDEHIPTIRELYSAQC CCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DAMLGALTRHMPAGVTWNRPEGGMFIWVNLPAQIDSMKLLAAAVDNHVAFVPGAPFFAEN HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHCC AQQNTLRLSFVTVPPEKIEEGVARLGKLLRERL CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA