Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690326

Identifier: 116690326

GI number: 116690326

Start: 2559967

End: 2560533

Strand: Direct

Name: 116690326

Synonym: Bcen2424_2305

Alternate gene names: NA

Gene position: 2559967-2560533 (Clockwise)

Preceding gene: 116690325

Following gene: 116690329

Centisome position: 73.48

GC content: 67.9

Gene sequence:

>567_bases
ATGGATACGATCAGGACACTCAACGAAGCCCGCCAGCAGATCCAGCAGTCGATCTTCGATCTGTTCAAGGGGCTGTCATT
CAGCGAACGGCTCGCGCAAGGCGGCCTGATGGCGCTGCAGGCCGTCTGCGGCGCGTGCCTCGCGTATGCGATCGGCCGCG
CGATGCATAGCGAGCAGGCCGTGTGGGCGGCGATCACCGCGATCGCCGTCACGCAGCACAACTACTCGGACACGATGTCG
CTGTCGCGCGACCAGTTCATCGGCGCGATGGTCGGCGGCGTGCTCGGCTTCGCCGGCGCGGCGCTGGGCGGCGATCGCCT
CGTCGCGTATGCGATCACGGTCGCGGTCGTGATCGTCTGCTGCTGGTGCCTGAACATCGGCAGCGCGGCGCGGCTCGGCG
GCGTGACCGCGACGATCGTGCTGCTGTTCCCGGGCAACGGCCCGCTGTGGGACGTTCCGCTGATCCGGTTCGGCGAAGTG
ACGCTCGGCACGGTGTGTGCGCTGGGTGTGTGCTGGGTGATGTCGAGAATCGAGCGGCGCTGGTTCCGCCGCGCGGCGGC
AAAGTGA

Upstream 100 bases:

>100_bases
GAACGGCGATGCGACGGCCGACGAACCGGCGGCCGCGTCGCCCGAACAGGCGCATTGACGGCAGCGCGCCGCCCGCTACC
CGCTTCTTGGCCGATGCACG

Downstream 100 bases:

>100_bases
CGCGGCGCCGGGCGACGCGCCCGGCAGCCGGATGAACGTTCGGAAAGCGGCGTGACGGTGATGGACCGGGTGACGGACCG
CGCGACGGCCCCGGTTACGG

Product: membrane protein-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MDTIRTLNEARQQIQQSIFDLFKGLSFSERLAQGGLMALQAVCGACLAYAIGRAMHSEQAVWAAITAIAVTQHNYSDTMS
LSRDQFIGAMVGGVLGFAGAALGGDRLVAYAITVAVVIVCCWCLNIGSAARLGGVTATIVLLFPGNGPLWDVPLIRFGEV
TLGTVCALGVCWVMSRIERRWFRRAAAK

Sequences:

>Translated_188_residues
MDTIRTLNEARQQIQQSIFDLFKGLSFSERLAQGGLMALQAVCGACLAYAIGRAMHSEQAVWAAITAIAVTQHNYSDTMS
LSRDQFIGAMVGGVLGFAGAALGGDRLVAYAITVAVVIVCCWCLNIGSAARLGGVTATIVLLFPGNGPLWDVPLIRFGEV
TLGTVCALGVCWVMSRIERRWFRRAAAK
>Mature_188_residues
MDTIRTLNEARQQIQQSIFDLFKGLSFSERLAQGGLMALQAVCGACLAYAIGRAMHSEQAVWAAITAIAVTQHNYSDTMS
LSRDQFIGAMVGGVLGFAGAALGGDRLVAYAITVAVVIVCCWCLNIGSAARLGGVTATIVLLFPGNGPLWDVPLIRFGEV
TLGTVCALGVCWVMSRIERRWFRRAAAK

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20085; Mature: 20085

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00099 THIOLASE_3 ; PS00457 NA_SOLUT_SYMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTIRTLNEARQQIQQSIFDLFKGLSFSERLAQGGLMALQAVCGACLAYAIGRAMHSEQA
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
VWAAITAIAVTQHNYSDTMSLSRDQFIGAMVGGVLGFAGAALGGDRLVAYAITVAVVIVC
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
CWCLNIGSAARLGGVTATIVLLFPGNGPLWDVPLIRFGEVTLGTVCALGVCWVMSRIERR
HHHHCCCCHHHHCCCEEEEEEEECCCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
WFRRAAAK
HHHHHCCC
>Mature Secondary Structure
MDTIRTLNEARQQIQQSIFDLFKGLSFSERLAQGGLMALQAVCGACLAYAIGRAMHSEQA
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
VWAAITAIAVTQHNYSDTMSLSRDQFIGAMVGGVLGFAGAALGGDRLVAYAITVAVVIVC
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
CWCLNIGSAARLGGVTATIVLLFPGNGPLWDVPLIRFGEVTLGTVCALGVCWVMSRIERR
HHHHCCCCHHHHCCCEEEEEEEECCCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
WFRRAAAK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA