| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690288
Identifier: 116690288
GI number: 116690288
Start: 2522416
End: 2522835
Strand: Direct
Name: 116690288
Synonym: Bcen2424_2267
Alternate gene names: NA
Gene position: 2522416-2522835 (Clockwise)
Preceding gene: 116690287
Following gene: 116690289
Centisome position: 72.4
GC content: 73.1
Gene sequence:
>420_bases ATGAGCTCCGCAAACCGAGAACACGAATTCGCGCTGAAGGTGCGCCGCGCGCTGGACGAGCGCGCGGCCGCGCTGCCTGC CGCGACCACCGATCGGCTGGCCGTCGCCCGCCGGGCCGCGCTCGCGCGCAAGAAGCCCGAAGCCGCGACCGCGCCGGTGT TCGTGCCGGCCTTCGCCGGCGCGGCCGGCGCCTACGGCCCGACGCCCGCGAACCGCCCGCCGACGTCGTTCGGCCGCCGC CTGCTGCGCGCGTGGCCGCTCGCGTTGCTGCTCGCGGGGCTCGTCGGCATCGCGTACTGGGAAGACATGCAGCGCACCGC CGAACTCGCCGACATCGACGCGGCGATGCTCAGCGACGACCTGCCGCTCAACGCGTATCTCGACCACGGGTTCAACGCGT ATCTTTCGCGCGCTCACTAA
Upstream 100 bases:
>100_bases CTGCCGCCGCAATGGGGTGCTCCGAGGGCAGCGTCAAGACGCACTGCTCACGAGCCACTCATACCCTGGCGCAAGCGCTC AAGGCCAAAGGAATCACGCT
Downstream 100 bases:
>100_bases CAGACAATAACGAGGGGATCGTACGGGTGAGTCAGAAGCGCGGCCTGGCCGTATTTTTCGGATGCGTGATCGCGATCGCC GTTTCCTACGTCGCCACGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSSANREHEFALKVRRALDERAAALPAATTDRLAVARRAALARKKPEAATAPVFVPAFAGAAGAYGPTPANRPPTSFGRR LLRAWPLALLLAGLVGIAYWEDMQRTAELADIDAAMLSDDLPLNAYLDHGFNAYLSRAH
Sequences:
>Translated_139_residues MSSANREHEFALKVRRALDERAAALPAATTDRLAVARRAALARKKPEAATAPVFVPAFAGAAGAYGPTPANRPPTSFGRR LLRAWPLALLLAGLVGIAYWEDMQRTAELADIDAAMLSDDLPLNAYLDHGFNAYLSRAH >Mature_138_residues SSANREHEFALKVRRALDERAAALPAATTDRLAVARRAALARKKPEAATAPVFVPAFAGAAGAYGPTPANRPPTSFGRRL LRAWPLALLLAGLVGIAYWEDMQRTAELADIDAAMLSDDLPLNAYLDHGFNAYLSRAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14952; Mature: 14821
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSANREHEFALKVRRALDERAAALPAATTDRLAVARRAALARKKPEAATAPVFVPAFAG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC AAGAYGPTPANRPPTSFGRRLLRAWPLALLLAGLVGIAYWEDMQRTAELADIDAAMLSDD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPLNAYLDHGFNAYLSRAH CCCHHHHHCCHHHHHHCCC >Mature Secondary Structure SSANREHEFALKVRRALDERAAALPAATTDRLAVARRAALARKKPEAATAPVFVPAFAG CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC AAGAYGPTPANRPPTSFGRRLLRAWPLALLLAGLVGIAYWEDMQRTAELADIDAAMLSDD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPLNAYLDHGFNAYLSRAH CCCHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA