| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mas [H]
Identifier: 116690273
GI number: 116690273
Start: 2505851
End: 2506870
Strand: Reverse
Name: mas [H]
Synonym: Bcen2424_2252
Alternate gene names: 116690273
Gene position: 2506870-2505851 (Counterclockwise)
Preceding gene: 116690274
Following gene: 116690272
Centisome position: 71.96
GC content: 69.31
Gene sequence:
>1020_bases ATGAAAGCCATCGAAATCACCGAATTCGGCGCCCCCGACGTGCTGAAGCTCGCGGAGCGTCCGCGCCCCGAACCGAAGCG CGGCGAGGTGCTGATCAAGGTGGCGGCTTCCGGCGTGAACCGGCCCGACGTGTTCCAGCGCAAGGGTGCCTATGCGCCGC CGCCGGGTGCGTCGGATCTGCCGGGCCTCGAGGTCGCGGGCGAGATCGTCGGTGGCGATTTGTCCGATGCGGCCCTGAAC CCGTTCGGGCTGAAACTGGGCGATCGCGTGTGCGCGCTGCTCGCGGGCGGCGGCTATGCCGAATATGCGGTCGCGCCGCT GCCGCAGTGCCTGCCGGTGCCGGATGGCCTCACCGATATCGAGGCCGCCTCGCTGCCCGAAACGTTTTTCACCGTGTGGA GCAACGTGTTCGACCGTGCGCAGCTCGGCGCGGGCGAAGGCGGCGAGCAGGAGACCCTGCTCGTGCAGGGCGGCTCGAGC GGCATCGGCGTGACGGCGATCCAGATCGCGCATGCGCTCGGCTTTCGGGTGTTCGCGACGGCCGGTACCGCCGACAAGTG CCGTGCGTGCGAGGCGCTCGGCGCCGAGCGCGCGATCAACTACAAGACCGAAGACTTCGTCGAAGTCGTGAAGTCGCTGA CGCACGATCGCGGTGTCGACGTGATCCTCGACATGGTGGCGGGCTCGTACGTGCCGCGCGAGCTGTCCGCGCTCGCGGAC GGCGGCCGTCTCGTGCTGATCGCGCTGCTCGGCGGCGCGAAGGCCGAGGTCAACCTGAGCGAGATCCTGCGCCGCCGGCT GACCGTGACCGGCTCGACGCTGCGTCCGCGCCCGGTCGAATTCAAGGCCCGTATCGCCGCGCAGCTGAAGGCGCGCGTGT GGCCGCTGCTCGCCGACGGCCGCATCAAGCCGGTGATCTATCGCGTGTTGCCCGCCGCGGACGCCGCCCAGGCGCATGCG CTGATGGAAAGCAGCGAGCATACCGGCAAGATCGTGCTCGATTGGGGAACGAACGCCTGA
Upstream 100 bases:
>100_bases TTTTCTGTAGCATCGTTGTGCGGCGCAGCAGCGCCGGCGAGGCGCCCGCGCCGTGCGCACGGGCGTGCCATCCGATTCCG ATCCTGGAGCGACTCTCACC
Downstream 100 bases:
>100_bases CGGCCCGTGCGGCGGGCTTGACATGCGCGGTTTGACCGGTTCAAGCCGCGCGCAGTAAAATCGCGGGTTTGCTTCGCCAG ATCCAACCTGACGGCCGGGT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKAIEITEFGAPDVLKLAERPRPEPKRGEVLIKVAASGVNRPDVFQRKGAYAPPPGASDLPGLEVAGEIVGGDLSDAALN PFGLKLGDRVCALLAGGGYAEYAVAPLPQCLPVPDGLTDIEAASLPETFFTVWSNVFDRAQLGAGEGGEQETLLVQGGSS GIGVTAIQIAHALGFRVFATAGTADKCRACEALGAERAINYKTEDFVEVVKSLTHDRGVDVILDMVAGSYVPRELSALAD GGRLVLIALLGGAKAEVNLSEILRRRLTVTGSTLRPRPVEFKARIAAQLKARVWPLLADGRIKPVIYRVLPAADAAQAHA LMESSEHTGKIVLDWGTNA
Sequences:
>Translated_339_residues MKAIEITEFGAPDVLKLAERPRPEPKRGEVLIKVAASGVNRPDVFQRKGAYAPPPGASDLPGLEVAGEIVGGDLSDAALN PFGLKLGDRVCALLAGGGYAEYAVAPLPQCLPVPDGLTDIEAASLPETFFTVWSNVFDRAQLGAGEGGEQETLLVQGGSS GIGVTAIQIAHALGFRVFATAGTADKCRACEALGAERAINYKTEDFVEVVKSLTHDRGVDVILDMVAGSYVPRELSALAD GGRLVLIALLGGAKAEVNLSEILRRRLTVTGSTLRPRPVEFKARIAAQLKARVWPLLADGRIKPVIYRVLPAADAAQAHA LMESSEHTGKIVLDWGTNA >Mature_339_residues MKAIEITEFGAPDVLKLAERPRPEPKRGEVLIKVAASGVNRPDVFQRKGAYAPPPGASDLPGLEVAGEIVGGDLSDAALN PFGLKLGDRVCALLAGGGYAEYAVAPLPQCLPVPDGLTDIEAASLPETFFTVWSNVFDRAQLGAGEGGEQETLLVQGGSS GIGVTAIQIAHALGFRVFATAGTADKCRACEALGAERAINYKTEDFVEVVKSLTHDRGVDVILDMVAGSYVPRELSALAD GGRLVLIALLGGAKAEVNLSEILRRRLTVTGSTLRPRPVEFKARIAAQLKARVWPLLADGRIKPVIYRVLPAADAAQAHA LMESSEHTGKIVLDWGTNA
Specific function: Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids [H]
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=343, Percent_Identity=37.0262390670554, Blast_Score=212, Evalue=3e-55, Organism=Homo sapiens, GI22538444, Length=343, Percent_Identity=37.0262390670554, Blast_Score=212, Evalue=3e-55, Organism=Homo sapiens, GI194239674, Length=337, Percent_Identity=33.5311572700297, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI13236495, Length=337, Percent_Identity=33.5311572700297, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI194239676, Length=337, Percent_Identity=30.8605341246291, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI18379349, Length=352, Percent_Identity=28.6931818181818, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI24308257, Length=355, Percent_Identity=26.7605633802817, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI197927207, Length=184, Percent_Identity=30.9782608695652, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI28557745, Length=285, Percent_Identity=29.1228070175439, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI41872631, Length=321, Percent_Identity=27.7258566978193, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI47519420, Length=359, Percent_Identity=27.0194986072423, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1790485, Length=340, Percent_Identity=29.7058823529412, Blast_Score=100, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17507255, Length=272, Percent_Identity=31.6176470588235, Blast_Score=109, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6319520, Length=344, Percent_Identity=25.5813953488372, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6323961, Length=349, Percent_Identity=26.3610315186246, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324486, Length=349, Percent_Identity=26.0744985673352, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI221330659, Length=252, Percent_Identity=25.7936507936508, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19920632, Length=252, Percent_Identity=25.7936507936508, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581345, Length=252, Percent_Identity=25, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR000794 - InterPro: IPR011032 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR020843 - InterPro: IPR013968 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF08240 ADH_N; PF00107 ADH_zinc_N; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: =2.3.1.111 [H]
Molecular weight: Translated: 35689; Mature: 35689
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIEITEFGAPDVLKLAERPRPEPKRGEVLIKVAASGVNRPDVFQRKGAYAPPPGASDL CCCEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCC PGLEVAGEIVGGDLSDAALNPFGLKLGDRVCALLAGGGYAEYAVAPLPQCLPVPDGLTDI CCHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCC EAASLPETFFTVWSNVFDRAQLGAGEGGEQETLLVQGGSSGIGVTAIQIAHALGFRVFAT CHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEE AGTADKCRACEALGAERAINYKTEDFVEVVKSLTHDRGVDVILDMVAGSYVPRELSALAD CCCHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCC GGRLVLIALLGGAKAEVNLSEILRRRLTVTGSTLRPRPVEFKARIAAQLKARVWPLLADG CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEECCC RIKPVIYRVLPAADAAQAHALMESSEHTGKIVLDWGTNA CCCHHHHEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC >Mature Secondary Structure MKAIEITEFGAPDVLKLAERPRPEPKRGEVLIKVAASGVNRPDVFQRKGAYAPPPGASDL CCCEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCC PGLEVAGEIVGGDLSDAALNPFGLKLGDRVCALLAGGGYAEYAVAPLPQCLPVPDGLTDI CCHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCC EAASLPETFFTVWSNVFDRAQLGAGEGGEQETLLVQGGSSGIGVTAIQIAHALGFRVFAT CHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEE AGTADKCRACEALGAERAINYKTEDFVEVVKSLTHDRGVDVILDMVAGSYVPRELSALAD CCCHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCC GGRLVLIALLGGAKAEVNLSEILRRRLTVTGSTLRPRPVEFKARIAAQLKARVWPLLADG CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEECCC RIKPVIYRVLPAADAAQAHALMESSEHTGKIVLDWGTNA CCCHHHHEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1527058; 12788972 [H]