Click here to switch to the map view.

The map label for this gene is 116690219

Identifier: 116690219

GI number: 116690219

Start: 2449756

End: 2450487

Strand: Direct

Name: 116690219

Synonym: Bcen2424_2198

Alternate gene names: NA

Gene position: 2449756-2450487 (Clockwise)

Preceding gene: 116690218

Following gene: 116690220

Centisome position: 70.32

GC content: 70.36

Gene sequence:

>732_bases
ATGCAGGCTTCGCATCTCGCTCCTGCCGGCGCCATGCCGGCTGCACCACGTATGAATCCCCGAGTGATCGTCGTCGCGGT
CGGTGTGCTTGCCGCACACGCGATCATGCTGACGGCCGCGTGGCTCCATCGCAACGCGCCGCCGCCGAAATCGGTCGAGG
TCCAGACGATCACCGCACAGCTCATCACGCCGGCGCCGATCGCGCAGCAGGTCGCGGCCGAGTCGATCCCGCAGCCCGCG
CCGCCGAAGCCCGTGCCTCGCGTGAAGCCCAAGGTCGAGCCGAAGCCGGTGCAGAAGGCGGCGAAGCCGACCCCGCAGCC
GGTTGCGCCCTCGCCGGCCCCGTCGCCCACACCCGCGCCTGCCGCCGACCCAACGCCTGCTCCCGCCGCGCCCGCTCCCG
CGGCACCGGCCGCCACGCCGGGCCCGGCGCGCGAAACGATGCAGGTCAGCGCGCCGAAGAACGTGCCGACGCTCCAATGC
AACTTCGTGAAGCCCGACTATCCGTCGATGTCGCGCCGCCGCGGCGAATCGGGTACCGCCTATGTTCACTTCGTCGTCGG
CGTGACCGGCAAGATCGAAAGCATCGATCTGCAGAAGAGCAGCGGCTATCCGCGCCTCGACGATGCCGCACTCGACGCGA
TGCGCTCGACCACCTGCCGTCCGTACGTCGAGAACGGCCAGGCGATCCGCGCCGCCCGCACACAGCCCTACAGCTTCGGG
CTCACCGACTAA

Upstream 100 bases:

>100_bases
CGGATTCGTAACCACCGTTTGCATCTCGCTGCTGATCTTCCGCAAGTGATGCCGATTCACCCGCCGCGCCCCGGGTGCGA
CGTCGTTCTTTCAAGCTAAC

Downstream 100 bases:

>100_bases
CCTGCCTCATCCGGAAGATTCAAAGGAAACAAAAATGCAAAGCTACGGTATCGCGCACGTCTGGGCGCAAGGTGATTTCG
TCACGCGCGCCATTGCGATC

Product: TonB family protein

Products: NA

Alternate protein names: NB Protein; NB Domain Protein; NB-Like Protein; NB Like Protein; Periplasmic Protein nB

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQASHLAPAGAMPAAPRMNPRVIVVAVGVLAAHAIMLTAAWLHRNAPPPKSVEVQTITAQLITPAPIAQQVAAESIPQPA
PPKPVPRVKPKVEPKPVQKAAKPTPQPVAPSPAPSPTPAPAADPTPAPAAPAPAAPAATPGPARETMQVSAPKNVPTLQC
NFVKPDYPSMSRRRGESGTAYVHFVVGVTGKIESIDLQKSSGYPRLDDAALDAMRSTTCRPYVENGQAIRAARTQPYSFG
LTD

Sequences:

>Translated_243_residues
MQASHLAPAGAMPAAPRMNPRVIVVAVGVLAAHAIMLTAAWLHRNAPPPKSVEVQTITAQLITPAPIAQQVAAESIPQPA
PPKPVPRVKPKVEPKPVQKAAKPTPQPVAPSPAPSPTPAPAADPTPAPAAPAPAAPAATPGPARETMQVSAPKNVPTLQC
NFVKPDYPSMSRRRGESGTAYVHFVVGVTGKIESIDLQKSSGYPRLDDAALDAMRSTTCRPYVENGQAIRAARTQPYSFG
LTD
>Mature_243_residues
MQASHLAPAGAMPAAPRMNPRVIVVAVGVLAAHAIMLTAAWLHRNAPPPKSVEVQTITAQLITPAPIAQQVAAESIPQPA
PPKPVPRVKPKVEPKPVQKAAKPTPQPVAPSPAPSPTPAPAADPTPAPAAPAPAAPAATPGPARETMQVSAPKNVPTLQC
NFVKPDYPSMSRRRGESGTAYVHFVVGVTGKIESIDLQKSSGYPRLDDAALDAMRSTTCRPYVENGQAIRAARTQPYSFG
LTD

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25295; Mature: 25295

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASHLAPAGAMPAAPRMNPRVIVVAVGVLAAHAIMLTAAWLHRNAPPPKSVEVQTITAQ
CCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
LITPAPIAQQVAAESIPQPAPPKPVPRVKPKVEPKPVQKAAKPTPQPVAPSPAPSPTPAP
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
AADPTPAPAAPAPAAPAATPGPARETMQVSAPKNVPTLQCNFVKPDYPSMSRRRGESGTA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHCCCCCCE
YVHFVVGVTGKIESIDLQKSSGYPRLDDAALDAMRSTTCRPYVENGQAIRAARTQPYSFG
EEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC
LTD
CCC
>Mature Secondary Structure
MQASHLAPAGAMPAAPRMNPRVIVVAVGVLAAHAIMLTAAWLHRNAPPPKSVEVQTITAQ
CCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
LITPAPIAQQVAAESIPQPAPPKPVPRVKPKVEPKPVQKAAKPTPQPVAPSPAPSPTPAP
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
AADPTPAPAAPAPAAPAATPGPARETMQVSAPKNVPTLQCNFVKPDYPSMSRRRGESGTA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHCCCCCCE
YVHFVVGVTGKIESIDLQKSSGYPRLDDAALDAMRSTTCRPYVENGQAIRAARTQPYSFG
EEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC
LTD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA