| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yetK [H]
Identifier: 116690213
GI number: 116690213
Start: 2444414
End: 2445322
Strand: Direct
Name: yetK [H]
Synonym: Bcen2424_2192
Alternate gene names: 116690213
Gene position: 2444414-2445322 (Clockwise)
Preceding gene: 116690209
Following gene: 116690214
Centisome position: 70.16
GC content: 66.56
Gene sequence:
>909_bases TTGAATCGCTACGCCCTCTTCCTCATCCTGTCGATGCTGTTCGTCGGCAGCAACGTCGGTATCGGTAAATCCATCGTTGT ATTCGTCCCGGTCGCCATCCTCGCCACGCTGCGCTTCGTGATCGCGATCGCCGTGCTGTGGCCGCTGTTCAGCCCCGTGA AGATGCGCGCGGTCAAGCGCGGCGAATGGCTGAACCTGTTCCTGCAGGCGTTCTTCGGCACCTTCATGTTCACGCTGCTG ATGCTCAACGGCGTACAGCGCACGAGCGCGGTGGCCGCGGGCGTCATCACGAGCACGATCCCGGCCATCGTCGCGTTGTT CGCGTGGCTGATCCTGCGTGAAAAACCGAACGGCCGTGCACTCGTGTCGATCGCGCTCGCGATCGTCGGCGTCGTGACGA TCAACCTCGCCAACGGCAGTGCGACCGGCCACGGCGCGCAGGGCGATGCGTCCGGCTCGCTGGCGGGCAACCTGCTGATC CTCGGCGCGGTGTGCTGCGAATCGATCTACGTGATCCTGTCGCGCCGGCTCACGCAAACGCTCGCGCCGATCGACATCTG CGCGTACACCCACCTGTTCGGCCTGTTCCTGATGCTGCCGCTCGGCGCGACGGCGCTGTGGCACTTCGATTACGCGAGCG TGCCGGCTGGCACCTGGGCCCTCGTCGTCTGGTACGGGCTGTCGGCCAGCATCTTCTCGTTCTGGCTGTGGATGAAGGGC ATCCGGCACGTACCGGGCAGCCTCGCCGGCGTGTTCAGCGCGGTGCTGCCGATCGCTGCGGCCGCGTACGGCATCGCGTT CCTCGGCGAGCGCCCGACGCTCGCGCACGGCATCGCGCTCGCCTGTGTCGTCACCGGCATCGTGCTTGCGAGCCTGCGCG TGAAACGTGTGCCGGCGGCCGCTTCCTGA
Upstream 100 bases:
>100_bases TGGCCGTGTCGTGCGCCGGGCGGCGCGCATCGAGGGCGGCTTTACGCTGTTACAACCGCGACCCTACAATCCTAACTGAA CTCGCCTTCCGGACTCCAGC
Downstream 100 bases:
>100_bases TCCGTCCCCGGCAGGGCCGGCGCGTCGCTGCAGCGGCGCCGGCCGACGCGTTACAATAGCGCGCCTTTTCAAGATTACCC CCGATACCTGCGCACCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MNRYALFLILSMLFVGSNVGIGKSIVVFVPVAILATLRFVIAIAVLWPLFSPVKMRAVKRGEWLNLFLQAFFGTFMFTLL MLNGVQRTSAVAAGVITSTIPAIVALFAWLILREKPNGRALVSIALAIVGVVTINLANGSATGHGAQGDASGSLAGNLLI LGAVCCESIYVILSRRLTQTLAPIDICAYTHLFGLFLMLPLGATALWHFDYASVPAGTWALVVWYGLSASIFSFWLWMKG IRHVPGSLAGVFSAVLPIAAAAYGIAFLGERPTLAHGIALACVVTGIVLASLRVKRVPAAAS
Sequences:
>Translated_302_residues MNRYALFLILSMLFVGSNVGIGKSIVVFVPVAILATLRFVIAIAVLWPLFSPVKMRAVKRGEWLNLFLQAFFGTFMFTLL MLNGVQRTSAVAAGVITSTIPAIVALFAWLILREKPNGRALVSIALAIVGVVTINLANGSATGHGAQGDASGSLAGNLLI LGAVCCESIYVILSRRLTQTLAPIDICAYTHLFGLFLMLPLGATALWHFDYASVPAGTWALVVWYGLSASIFSFWLWMKG IRHVPGSLAGVFSAVLPIAAAAYGIAFLGERPTLAHGIALACVVTGIVLASLRVKRVPAAAS >Mature_302_residues MNRYALFLILSMLFVGSNVGIGKSIVVFVPVAILATLRFVIAIAVLWPLFSPVKMRAVKRGEWLNLFLQAFFGTFMFTLL MLNGVQRTSAVAAGVITSTIPAIVALFAWLILREKPNGRALVSIALAIVGVVTINLANGSATGHGAQGDASGSLAGNLLI LGAVCCESIYVILSRRLTQTLAPIDICAYTHLFGLFLMLPLGATALWHFDYASVPAGTWALVVWYGLSASIFSFWLWMKG IRHVPGSLAGVFSAVLPIAAAAYGIAFLGERPTLAHGIALACVVTGIVLASLRVKRVPAAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31986; Mature: 31986
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRYALFLILSMLFVGSNVGIGKSIVVFVPVAILATLRFVIAIAVLWPLFSPVKMRAVKR CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC GEWLNLFLQAFFGTFMFTLLMLNGVQRTSAVAAGVITSTIPAIVALFAWLILREKPNGRA CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LVSIALAIVGVVTINLANGSATGHGAQGDASGSLAGNLLILGAVCCESIYVILSRRLTQT HHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPIDICAYTHLFGLFLMLPLGATALWHFDYASVPAGTWALVVWYGLSASIFSFWLWMKG HHHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IRHVPGSLAGVFSAVLPIAAAAYGIAFLGERPTLAHGIALACVVTGIVLASLRVKRVPAA HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC AS CC >Mature Secondary Structure MNRYALFLILSMLFVGSNVGIGKSIVVFVPVAILATLRFVIAIAVLWPLFSPVKMRAVKR CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC GEWLNLFLQAFFGTFMFTLLMLNGVQRTSAVAAGVITSTIPAIVALFAWLILREKPNGRA CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LVSIALAIVGVVTINLANGSATGHGAQGDASGSLAGNLLILGAVCCESIYVILSRRLTQT HHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPIDICAYTHLFGLFLMLPLGATALWHFDYASVPAGTWALVVWYGLSASIFSFWLWMKG HHHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IRHVPGSLAGVFSAVLPIAAAAYGIAFLGERPTLAHGIALACVVTGIVLASLRVKRVPAA HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC AS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]