Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690209

Identifier: 116690209

GI number: 116690209

Start: 2439031

End: 2439633

Strand: Direct

Name: 116690209

Synonym: Bcen2424_2188

Alternate gene names: NA

Gene position: 2439031-2439633 (Clockwise)

Preceding gene: 116690208

Following gene: 116690213

Centisome position: 70.01

GC content: 63.68

Gene sequence:

>603_bases
ATGCGATTCAGCCTGCGGTTCATCATGACGGCCGGCGCGTCGGCCATGCTGGCGGCCTGCGCGACAGCACCGTCGCACCC
GACGATCAGTACCACCGTTGCCGTCACATCGACTCCGTCACCGCAGAAAACACTACGCGATGGCGGGGCCGCAACCGACC
TGTCAGTCGTCGGTCAGCCCGCGCCGACGTTCCACACGCTCCTGTCCGTTCGCGAATGTGTTGCCGGAAAATGCACGGCA
GGCATCGCAAAGCCGACGATCGCGGTAACCGTCCAGCGCGTTTCCGAAGGGCACGCGACCATACGCTTCATGGTGACCAT
GGATATCGCCGGCAGTCAGACGCTGAAATCGCAAACCAGCCAGGCGACGTCGGAAGTGACCCTGTCGGTCCCGTCGGGCG
CGACGCCGATCACCGATCAGTTTGCCGTTGACCGCGTCGCGACGATCAAGGTGGGCGAGTTTCGACACGTGGCGTTGCCG
CACGGCATTCGTGCCTATGTGTGCGTCGCGATCCCCAATGCAAACGGCGTGACGGACGGAAGCTGCGATGTCAGTCGCAT
GCAAACGACCAAGGGCACCGAGCTCGCGACTTCCGCGCTCTGA

Upstream 100 bases:

>100_bases
ATCGCCGAGCGTGCGAAGCGCGATGGATGCCGAGCGCCGCACGCTAAAGATCGGCATTGATCTGACGATATAGGAGGTTT
CGGCTCCGCGAGTCACGTCC

Downstream 100 bases:

>100_bases
TCCGCGCGCCGTACGACACCCCCTCCCCCTCACGGATGCCGAATGTAATCCACCAACGCCCGCGTATACTCATCCGGCCG
CTTATCACACAGACTCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MRFSLRFIMTAGASAMLAACATAPSHPTISTTVAVTSTPSPQKTLRDGGAATDLSVVGQPAPTFHTLLSVRECVAGKCTA
GIAKPTIAVTVQRVSEGHATIRFMVTMDIAGSQTLKSQTSQATSEVTLSVPSGATPITDQFAVDRVATIKVGEFRHVALP
HGIRAYVCVAIPNANGVTDGSCDVSRMQTTKGTELATSAL

Sequences:

>Translated_200_residues
MRFSLRFIMTAGASAMLAACATAPSHPTISTTVAVTSTPSPQKTLRDGGAATDLSVVGQPAPTFHTLLSVRECVAGKCTA
GIAKPTIAVTVQRVSEGHATIRFMVTMDIAGSQTLKSQTSQATSEVTLSVPSGATPITDQFAVDRVATIKVGEFRHVALP
HGIRAYVCVAIPNANGVTDGSCDVSRMQTTKGTELATSAL
>Mature_200_residues
MRFSLRFIMTAGASAMLAACATAPSHPTISTTVAVTSTPSPQKTLRDGGAATDLSVVGQPAPTFHTLLSVRECVAGKCTA
GIAKPTIAVTVQRVSEGHATIRFMVTMDIAGSQTLKSQTSQATSEVTLSVPSGATPITDQFAVDRVATIKVGEFRHVALP
HGIRAYVCVAIPNANGVTDGSCDVSRMQTTKGTELATSAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20632; Mature: 20632

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSLRFIMTAGASAMLAACATAPSHPTISTTVAVTSTPSPQKTLRDGGAATDLSVVGQP
CCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHCCCCCCEEEECCCC
APTFHTLLSVRECVAGKCTAGIAKPTIAVTVQRVSEGHATIRFMVTMDIAGSQTLKSQTS
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCHHHHHHHH
QATSEVTLSVPSGATPITDQFAVDRVATIKVGEFRHVALPHGIRAYVCVAIPNANGVTDG
CCCCEEEEECCCCCCCCCCHHHHCEEEEEEECCEEEEECCCCCEEEEEEEECCCCCCCCC
SCDVSRMQTTKGTELATSAL
CCCHHHHCCCCCCCHHHCCC
>Mature Secondary Structure
MRFSLRFIMTAGASAMLAACATAPSHPTISTTVAVTSTPSPQKTLRDGGAATDLSVVGQP
CCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHCCCCCCEEEECCCC
APTFHTLLSVRECVAGKCTAGIAKPTIAVTVQRVSEGHATIRFMVTMDIAGSQTLKSQTS
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCHHHHHHHH
QATSEVTLSVPSGATPITDQFAVDRVATIKVGEFRHVALPHGIRAYVCVAIPNANGVTDG
CCCCEEEEECCCCCCCCCCHHHHCEEEEEEECCEEEEECCCCCEEEEEEEECCCCCCCCC
SCDVSRMQTTKGTELATSAL
CCCHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA