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The map label for this gene is aidB [H]

Identifier: 116690181

GI number: 116690181

Start: 2405056

End: 2406807

Strand: Reverse

Name: aidB [H]

Synonym: Bcen2424_2160

Alternate gene names: 116690181

Gene position: 2406807-2405056 (Counterclockwise)

Preceding gene: 116690183

Following gene: 116690180

Centisome position: 69.08

GC content: 70.66

Gene sequence:

>1752_bases
ATGAACGACACCGCTCGCACGCCGGACACCGGCGCATCCAATATTCCCGATACCCGGGGCATCAATTTCTTCACCCTCGA
TCCCGATCTCGGCGCGTTGCTGAAGCTGCATCTCGGCGACGCGCACTATGCCGAACTCGAGCCGCGGTTGCACGCGCTCG
GCGCGCGCGTGTCGGGCGAACTCGACGAGTGGGCGTCGCGCGCGGACAAGCATCCGCCCGTGCTCGAGCATCGCAACCGG
CGCGGCGAGGCCGTGCAGCGGATCGACAAGGACCCGGCGTACGTCGCGCTCGAACGCGTCGCGTATGCGGAGCTCGGGCT
CGCATCACTGAGCCACGGCGCCGAAACCGTGCCGCCGCTCGTCAAGTACGCGCTGACGTTCCTGTTCGTGCAGGCGGAAT
TCGGGCTGTGCTGCCCGGTCAGCATGACCGATTCGCTGACGCGCACGCTGCGCCGCTTCGGCGATCCCACGCTCGTCGCG
CGCTACCTGCCGCGGCTCGCATCGCGCGACTTCGACACGCTGTACCAGGGCGCGATGTTCATGACCGAGCAGGCGGCCGG
CTCCGACGTCGGCCGTATCGCGACGCGCGCGACCAGCGAAACCGACGCGCACGGCGAGACCGTCTGGCGGCTGACCGGCG
ACAAGTGGTTCTGCTCGAACGCGGACGCCGATCTCGCGATGGTGCTCGCACGGCCCGACGGCGCGCCGGACGGCATCAAG
GGCCTCGCGCTGTTCCTGCTGCCGAAGACACTGCCGGACGGCACGCGCAACCGCTACCGGATCGTGCGCCTGAAGGACAA
GCTCGGCAGCCGTTCGATGGCCAGCGGCGAGATCGCGCTCGAAGGTGCGCAGGCGTACCTGATCGGCGAGATCGGCCGCG
GCTTTCACCAGATGGCCGACATGATCAACATGTCGCGGCTGTCGAACGGCGTGCGCGCGGCGGGGCTGATGCGGCGCGCG
CTGAACGAAGCGCTGCACGTCGCCGCGCATCGCGAGGCATTCGGCCGCAAGCTGATCGAGATGCCGCTGATGCAGCGCCA
GTTGATGAAGATGCTGCTGCCGGCCGAGGCCGCGCGCGCGATGTTCATGCAGATCGCGCTGCTGCTGCCGCAGGCCGACG
CGGGCGACGAGCAGGCCGCGCGCTGCGTGCGGATCCTGACGCCGCTGATCAAGTTCCGCGCCTGCCGCGACGCGCGCCGC
GTGACGGGCGACGCGATGGAAGTGCGCGGCGGCACCGGCTATATCGAGGAATGGAGCGATGCGCGGCTCGTGCGCGACGC
GCATCTCGGTTCGATCTGGGAAGGGACGAGCAACATCGTCGCGCTCGACGTCGCGCGTGCCGCGCAGCGCGAGCATGCGC
TCGACGCGCTGCGCACATTCCTCGGCGATCGTCTGGGCGCGGCGCCGCTGCCCGAGGCGAGCCGCACGGCGCTGCGGCGC
ATCCTCGTACGGGCATGCGATGCACTTGCGAGGGTGGCCGGGGAAGGCGACGACGCGCGCGTGCGGCAGGCCGCGTCCGC
GCTGTACTACGCGAGCGCGGCCGTGCTGATGGCCTGCGAGGGCGCACGGCTCGCGCCGGATTTCCGGCGTCTCGCGCTGG
CGCACCTGATCGTGCGGCACAAGCTGCTGCCGGTCGATCCGCTCGCGCCGGCCCCGCGCGACGACGAATCGGCCGCGTCC
GACGCGCTGCTGCGCGGCCTGCCGGTCGCGCTCGACATGGCGCTCGACCTGCTGCCGGAGGTCGAACGATGA

Upstream 100 bases:

>100_bases
CGATCGCGCGCCTACGCTCTGCGGGAGGCTTGACGCAGGACCGGCCGGGCGCTGCGGCGCATGGCCTGGTCGCTGCACCG
GCAACCCAGGAGACGCACGC

Downstream 100 bases:

>100_bases
ACCCGACGCGTGGCGCACTGGACGGCCTGAAGGTCGTCGACCTGAGCCGAGTGCTCGGCGGCCCGTACTGCACGCAGGCG
CTCGCCGACCACGGCGCGAC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MNDTARTPDTGASNIPDTRGINFFTLDPDLGALLKLHLGDAHYAELEPRLHALGARVSGELDEWASRADKHPPVLEHRNR
RGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPTLVA
RYLPRLASRDFDTLYQGAMFMTEQAAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIK
GLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRA
LNEALHVAAHREAFGRKLIEMPLMQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARR
VTGDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQREHALDALRTFLGDRLGAAPLPEASRTALRR
ILVRACDALARVAGEGDDARVRQAASALYYASAAVLMACEGARLAPDFRRLALAHLIVRHKLLPVDPLAPAPRDDESAAS
DALLRGLPVALDMALDLLPEVER

Sequences:

>Translated_583_residues
MNDTARTPDTGASNIPDTRGINFFTLDPDLGALLKLHLGDAHYAELEPRLHALGARVSGELDEWASRADKHPPVLEHRNR
RGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPTLVA
RYLPRLASRDFDTLYQGAMFMTEQAAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIK
GLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRA
LNEALHVAAHREAFGRKLIEMPLMQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARR
VTGDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQREHALDALRTFLGDRLGAAPLPEASRTALRR
ILVRACDALARVAGEGDDARVRQAASALYYASAAVLMACEGARLAPDFRRLALAHLIVRHKLLPVDPLAPAPRDDESAAS
DALLRGLPVALDMALDLLPEVER
>Mature_583_residues
MNDTARTPDTGASNIPDTRGINFFTLDPDLGALLKLHLGDAHYAELEPRLHALGARVSGELDEWASRADKHPPVLEHRNR
RGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPTLVA
RYLPRLASRDFDTLYQGAMFMTEQAAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIK
GLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMADMINMSRLSNGVRAAGLMRRA
LNEALHVAAHREAFGRKLIEMPLMQRQLMKMLLPAEAARAMFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARR
VTGDAMEVRGGTGYIEEWSDARLVRDAHLGSIWEGTSNIVALDVARAAQREHALDALRTFLGDRLGAAPLPEASRTALRR
ILVRACDALARVAGEGDDARVRQAASALYYASAAVLMACEGARLAPDFRRLALAHLIVRHKLLPVDPLAPAPRDDESAAS
DALLRGLPVALDMALDLLPEVER

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=328, Percent_Identity=27.4390243902439, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI4557233, Length=273, Percent_Identity=31.1355311355311, Blast_Score=106, Evalue=8e-23,
Organism=Homo sapiens, GI226958414, Length=310, Percent_Identity=28.0645161290323, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI226958412, Length=310, Percent_Identity=28.0645161290323, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI21361497, Length=294, Percent_Identity=28.5714285714286, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI76496475, Length=340, Percent_Identity=26.4705882352941, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI4557235, Length=340, Percent_Identity=26.4705882352941, Blast_Score=93, Evalue=8e-19,
Organism=Homo sapiens, GI187960098, Length=300, Percent_Identity=29, Blast_Score=90, Evalue=7e-18,
Organism=Homo sapiens, GI4557231, Length=300, Percent_Identity=29, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI4501857, Length=302, Percent_Identity=25.8278145695364, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI7656849, Length=323, Percent_Identity=24.1486068111455, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI87082384, Length=397, Percent_Identity=34.2569269521411, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI87081958, Length=311, Percent_Identity=27.0096463022508, Blast_Score=84, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI86563381, Length=492, Percent_Identity=31.7073170731707, Blast_Score=219, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI86563383, Length=492, Percent_Identity=31.7073170731707, Blast_Score=219, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI17538396, Length=306, Percent_Identity=29.4117647058824, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=300, Percent_Identity=26.6666666666667, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=318, Percent_Identity=26.7295597484277, Blast_Score=104, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17570075, Length=292, Percent_Identity=27.7397260273973, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=310, Percent_Identity=29.0322580645161, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=316, Percent_Identity=28.7974683544304, Blast_Score=86, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=311, Percent_Identity=25.7234726688103, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17569725, Length=304, Percent_Identity=27.3026315789474, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=210, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17534899, Length=296, Percent_Identity=26.3513513513513, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71985184, Length=292, Percent_Identity=25.3424657534247, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=210, Percent_Identity=25.2380952380952, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17534353, Length=302, Percent_Identity=24.5033112582781, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71982178, Length=196, Percent_Identity=27.0408163265306, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24666513, Length=321, Percent_Identity=25.5451713395639, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI21355753, Length=309, Percent_Identity=27.831715210356, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21356377, Length=281, Percent_Identity=27.7580071174377, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24660351, Length=300, Percent_Identity=29, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281363737, Length=356, Percent_Identity=25.561797752809, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24646207, Length=275, Percent_Identity=26.1818181818182, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 63665; Mature: 63665

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTARTPDTGASNIPDTRGINFFTLDPDLGALLKLHLGDAHYAELEPRLHALGARVSGE
CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHCHHHHHHCCHHCCC
LDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPL
HHHHHHHCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPTLVARYLPRLASRDFDTLYQGAMF
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHH
MTEQAAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIK
HHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCEEEEEECCCCCCCHHH
GLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMAD
HHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHH
MINMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMPLMQRQLMKMLLPAEAARA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSD
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCHHCCCC
ARLVRDAHLGSIWEGTSNIVALDVARAAQREHALDALRTFLGDRLGAAPLPEASRTALRR
HHHHHHHHCCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ILVRACDALARVAGEGDDARVRQAASALYYASAAVLMACEGARLAPDFRRLALAHLIVRH
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
KLLPVDPLAPAPRDDESAASDALLRGLPVALDMALDLLPEVER
HCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNDTARTPDTGASNIPDTRGINFFTLDPDLGALLKLHLGDAHYAELEPRLHALGARVSGE
CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHCHHHHHHCCHHCCC
LDEWASRADKHPPVLEHRNRRGEAVQRIDKDPAYVALERVAYAELGLASLSHGAETVPPL
HHHHHHHCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRFGDPTLVARYLPRLASRDFDTLYQGAMF
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHH
MTEQAAGSDVGRIATRATSETDAHGETVWRLTGDKWFCSNADADLAMVLARPDGAPDGIK
HHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCEEEEEECCCCCCCHHH
GLALFLLPKTLPDGTRNRYRIVRLKDKLGSRSMASGEIALEGAQAYLIGEIGRGFHQMAD
HHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHH
MINMSRLSNGVRAAGLMRRALNEALHVAAHREAFGRKLIEMPLMQRQLMKMLLPAEAARA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MFMQIALLLPQADAGDEQAARCVRILTPLIKFRACRDARRVTGDAMEVRGGTGYIEEWSD
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCHHCCCC
ARLVRDAHLGSIWEGTSNIVALDVARAAQREHALDALRTFLGDRLGAAPLPEASRTALRR
HHHHHHHHCCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ILVRACDALARVAGEGDDARVRQAASALYYASAAVLMACEGARLAPDFRRLALAHLIVRH
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
KLLPVDPLAPAPRDDESAASDALLRGLPVALDMALDLLPEVER
HCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]