Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690175

Identifier: 116690175

GI number: 116690175

Start: 2394989

End: 2395978

Strand: Reverse

Name: 116690175

Synonym: Bcen2424_2154

Alternate gene names: NA

Gene position: 2395978-2394989 (Counterclockwise)

Preceding gene: 116690176

Following gene: 116690174

Centisome position: 68.77

GC content: 65.56

Gene sequence:

>990_bases
ATGCGCACTTTCCTTTCCCTCGGCCGCACGCTCGCGCTGGCCGCCGCCGTCCTGGCGCCCGCCGCCCACGCGAATAACGT
GATCGTTCTCAACTCGGCCGAAGCGACGCTTTCCCTGATCGACCAGCAGACCCGCGAAGTCGTTTCCACGATGCCGACCG
GCAAGGAACCGCACCATTTGATGGCGACGCCCGACAATGCGTCGCTGATCGTTGCAAATTCGGTCTCGAACAGCCTGATG
TTCCTCGATCCGAAGACGGGCAAGCTGCAGCGCACCGTCGAAGGGATCGACGATCCTTACCAGCTCGGTTTCTCGCCCGA
CCGCAAGTGGTTCGCGGCGGCCGGCCTGCGGCTCGACCGCGTCGACATCTACGGCTACGACGGCCGCGACCTGAAGCTCG
TGAAGCGCGTGCCGCTCGCGGTGATGCCGAGCCACCTCGCGTTCACGAAGGACAGCAAGACGCTGCTCGTGTCGCTGCAG
GTGTCCGGCGAGATCGCGGCGATCGACCTGCCCACGCAGACGGTCAAATGGAAGATGAAGGTCGGCAAGGTGCCGGCCGG
CCTGTGGCTCACGCCGGACGACAAGTTCCTGCTCGTCGGGATGACCGGCGCGGATTACGTCGCGGTCGTCGACTGGCGCA
ACCAGAAGGTCGTCAAGCAGATCTACACGGGCAAGGGCGCGCACAACTTCCGCTCGCTCGCCGACGGCACGCACGTCGCG
GTGACGAACCGCGTCGCGAACACGATCAGCATCATCGACGAGAACACGCTCACCAACGTCGGCGACATCACGGGCCTGTT
GCCGGGCCCCGACGACATGGAGCTGTCCGCCGACAAGAAGACGCTGTGGGTGACGTTCCGTTTCGCGAAGAAGGTCGGGA
TCATCGACCTGGCCTCGCGCAAGCTGGTGCAGACGATCGCCGTCGGCCGCTCGCCGCACGGCATCTACTTCTACGACCGC
GCGCCGTGGAGAGCGGCGAACGGCGCGTGA

Upstream 100 bases:

>100_bases
AGGCGGGGCGTGCGTCGAAGCGGCGCAATGCCGGCCTGGGTCAACCGGCGGGGCCCGCCGAACGTTCTACAATGACTGCT
GTTCCACGACGTGAGTCTTC

Downstream 100 bases:

>100_bases
CGGGCGGAGGCGAACGATGCTGCACCTGATCGATGCGTTCGTGTCGGACATCCAGACCTGGCTGTACGTCGACGTCGTGC
AGCCGCTCCTCTTCAAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Surface Layer Protein; Cell Surface Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; YVTN Family Beta-Propeller Repeat Protein; Cytochrome D1 Heme Region; Beta-Propeller Repeat-Containing Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Triple Helix Repeat-Containing Collagen; Signal Peptide Protein; Beta-Propeller Fold Protein; Signal Peptide; Yvtn Beta-Propeller Repeat Family Protein; WD40 Domain-Containing Protein; Outer Membrane Protein; YVTN Beta-Propeller Repeat Family Protein; PGRS-Subfamily Gly-Rich Protein; Cytochrome D1 Heme Subunit; IPT/TIG Domain Protein; Serine/Threonine Protein Kinase; YVTN Family Beta-Propeller Repeat-Containing Protein; Vegetative Incompatibility; Surface Antigen-Like Protein; Surface Antigen; Secreted Protein; Lipoprotein; Exported Protein; YVTN Family Beta-Propeller Repeat Family Protein

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MRTFLSLGRTLALAAAVLAPAAHANNVIVLNSAEATLSLIDQQTREVVSTMPTGKEPHHLMATPDNASLIVANSVSNSLM
FLDPKTGKLQRTVEGIDDPYQLGFSPDRKWFAAAGLRLDRVDIYGYDGRDLKLVKRVPLAVMPSHLAFTKDSKTLLVSLQ
VSGEIAAIDLPTQTVKWKMKVGKVPAGLWLTPDDKFLLVGMTGADYVAVVDWRNQKVVKQIYTGKGAHNFRSLADGTHVA
VTNRVANTISIIDENTLTNVGDITGLLPGPDDMELSADKKTLWVTFRFAKKVGIIDLASRKLVQTIAVGRSPHGIYFYDR
APWRAANGA

Sequences:

>Translated_329_residues
MRTFLSLGRTLALAAAVLAPAAHANNVIVLNSAEATLSLIDQQTREVVSTMPTGKEPHHLMATPDNASLIVANSVSNSLM
FLDPKTGKLQRTVEGIDDPYQLGFSPDRKWFAAAGLRLDRVDIYGYDGRDLKLVKRVPLAVMPSHLAFTKDSKTLLVSLQ
VSGEIAAIDLPTQTVKWKMKVGKVPAGLWLTPDDKFLLVGMTGADYVAVVDWRNQKVVKQIYTGKGAHNFRSLADGTHVA
VTNRVANTISIIDENTLTNVGDITGLLPGPDDMELSADKKTLWVTFRFAKKVGIIDLASRKLVQTIAVGRSPHGIYFYDR
APWRAANGA
>Mature_329_residues
MRTFLSLGRTLALAAAVLAPAAHANNVIVLNSAEATLSLIDQQTREVVSTMPTGKEPHHLMATPDNASLIVANSVSNSLM
FLDPKTGKLQRTVEGIDDPYQLGFSPDRKWFAAAGLRLDRVDIYGYDGRDLKLVKRVPLAVMPSHLAFTKDSKTLLVSLQ
VSGEIAAIDLPTQTVKWKMKVGKVPAGLWLTPDDKFLLVGMTGADYVAVVDWRNQKVVKQIYTGKGAHNFRSLADGTHVA
VTNRVANTISIIDENTLTNVGDITGLLPGPDDMELSADKKTLWVTFRFAKKVGIIDLASRKLVQTIAVGRSPHGIYFYDR
APWRAANGA

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35815; Mature: 35815

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTFLSLGRTLALAAAVLAPAAHANNVIVLNSAEATLSLIDQQTREVVSTMPTGKEPHHL
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEE
MATPDNASLIVANSVSNSLMFLDPKTGKLQRTVEGIDDPYQLGFSPDRKWFAAAGLRLDR
EECCCCCEEEEEECCCCCEEEECCCCCHHHHHHHCCCCHHHCCCCCCCCCHHHCCCEEEE
VDIYGYDGRDLKLVKRVPLAVMPSHLAFTKDSKTLLVSLQVSGEIAAIDLPTQTVKWKMK
EEEEECCCCCEEEEECCCCEECCCCEEEECCCCEEEEEEEECCEEEEEECCCCEEEEEEE
VGKVPAGLWLTPDDKFLLVGMTGADYVAVVDWRNQKVVKQIYTGKGAHNFRSLADGTHVA
ECCCCCCCEECCCCCEEEEEECCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHCCCCEEE
VTNRVANTISIIDENTLTNVGDITGLLPGPDDMELSADKKTLWVTFRFAKKVGIIDLASR
EEHHHHHEEEEEECCCCCCCCHHEECCCCCCCCEECCCCEEEEEEEEECCCCCEEEHHHH
KLVQTIAVGRSPHGIYFYDRAPWRAANGA
HHHHHHHCCCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MRTFLSLGRTLALAAAVLAPAAHANNVIVLNSAEATLSLIDQQTREVVSTMPTGKEPHHL
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEE
MATPDNASLIVANSVSNSLMFLDPKTGKLQRTVEGIDDPYQLGFSPDRKWFAAAGLRLDR
EECCCCCEEEEEECCCCCEEEECCCCCHHHHHHHCCCCHHHCCCCCCCCCHHHCCCEEEE
VDIYGYDGRDLKLVKRVPLAVMPSHLAFTKDSKTLLVSLQVSGEIAAIDLPTQTVKWKMK
EEEEECCCCCEEEEECCCCEECCCCEEEECCCCEEEEEEEECCEEEEEECCCCEEEEEEE
VGKVPAGLWLTPDDKFLLVGMTGADYVAVVDWRNQKVVKQIYTGKGAHNFRSLADGTHVA
ECCCCCCCEECCCCCEEEEEECCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHCCCCEEE
VTNRVANTISIIDENTLTNVGDITGLLPGPDDMELSADKKTLWVTFRFAKKVGIIDLASR
EEHHHHHEEEEEECCCCCCCCHHEECCCCCCCCEECCCCEEEEEEEEECCCCCEEEHHHH
KLVQTIAVGRSPHGIYFYDRAPWRAANGA
HHHHHHHCCCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA