| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690171
Identifier: 116690171
GI number: 116690171
Start: 2391652
End: 2392116
Strand: Direct
Name: 116690171
Synonym: Bcen2424_2150
Alternate gene names: NA
Gene position: 2391652-2392116 (Clockwise)
Preceding gene: 116690166
Following gene: 116690177
Centisome position: 68.65
GC content: 68.82
Gene sequence:
>465_bases ATGAGTACGCTGGACCAGCTTTACGCGAAGGCCGACGAACGCCGCGCACAAGGCGCGCTCAACTATGCCGGCGCGCTGCT GCCGGTCGAAGCATTCGAACTGCTGCAGCTCGACCCGTCGGCGCGCCTCGTCGATGTGCGCACCCGCGCCGAGCTCGACT GGATCGGCCGCCCGCTCGTCGGCGACGGCCAGTACCTGCACCTCGAATGGACGCGTTACCCGGGCGGCGTGCCGAACGCC GAATTCGTCAACGAACTGAAGGCGGCCCTCCCGGCCGATACGCCCATCCTGTTCCTGTGCCGCAGCGCCGCGCGCTCGAA GCTCGCCGCGGTCGCGTCCGCGCAGGCCGGCTTCACGAAAGCGTTCGACCTGCTCGAAGGCTTCGAAGGCGCGAAGGACG CCGAAGGCCACCGCAAGACGGTCGACGGCTGGTGCTTCCGCAAACTGCCGTGGATCGGCGCCTGA
Upstream 100 bases:
>100_bases TGGTGAGCGCGTGTACGGCCCATGCACCGTGTCGCCTGCGGACGTCCGTGCCGCGACGTCGCGCTAGAATGATCGTTTGA CCGATACGGAGACCTCTGCC
Downstream 100 bases:
>100_bases GCGCGCGCCGCTCACGCCGGCTGCGACGACCTCATCGTCGAGCCGGGCGATGACATGCCGATGACGGGCCGCGTTGCGCG GCCCGTTGCTTTTGACAAGG
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Rhodanese-Like Domain-Containing Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Domain Protein; Sulfurtransferase Protein; Rhodanese/Cdc25 Fold; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSTLDQLYAKADERRAQGALNYAGALLPVEAFELLQLDPSARLVDVRTRAELDWIGRPLVGDGQYLHLEWTRYPGGVPNA EFVNELKAALPADTPILFLCRSAARSKLAAVASAQAGFTKAFDLLEGFEGAKDAEGHRKTVDGWCFRKLPWIGA
Sequences:
>Translated_154_residues MSTLDQLYAKADERRAQGALNYAGALLPVEAFELLQLDPSARLVDVRTRAELDWIGRPLVGDGQYLHLEWTRYPGGVPNA EFVNELKAALPADTPILFLCRSAARSKLAAVASAQAGFTKAFDLLEGFEGAKDAEGHRKTVDGWCFRKLPWIGA >Mature_153_residues STLDQLYAKADERRAQGALNYAGALLPVEAFELLQLDPSARLVDVRTRAELDWIGRPLVGDGQYLHLEWTRYPGGVPNAE FVNELKAALPADTPILFLCRSAARSKLAAVASAQAGFTKAFDLLEGFEGAKDAEGHRKTVDGWCFRKLPWIGA
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16873; Mature: 16742
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLDQLYAKADERRAQGALNYAGALLPVEAFELLQLDPSARLVDVRTRAELDWIGRPLV CCHHHHHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHCCCCCEEEEEHHHCCHHHCCCCCC GDGQYLHLEWTRYPGGVPNAEFVNELKAALPADTPILFLCRSAARSKLAAVASAQAGFTK CCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH AFDLLEGFEGAKDAEGHRKTVDGWCFRKLPWIGA HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure STLDQLYAKADERRAQGALNYAGALLPVEAFELLQLDPSARLVDVRTRAELDWIGRPLV CHHHHHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHCCCCCEEEEEHHHCCHHHCCCCCC GDGQYLHLEWTRYPGGVPNAEFVNELKAALPADTPILFLCRSAARSKLAAVASAQAGFTK CCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH AFDLLEGFEGAKDAEGHRKTVDGWCFRKLPWIGA HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA