| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116690165
Identifier: 116690165
GI number: 116690165
Start: 2382831
End: 2383634
Strand: Direct
Name: 116690165
Synonym: Bcen2424_2144
Alternate gene names: NA
Gene position: 2382831-2383634 (Clockwise)
Preceding gene: 116690164
Following gene: 116690166
Centisome position: 68.4
GC content: 67.79
Gene sequence:
>804_bases ATGAAAAGACTCAGCACCGTGTTCGGCGCGCTGCTCGCCGTGTCGGCCACGCTCAACGCGCACGCGGACCCCAGCATCAC CGCATCGGCCGCCTCGACGCCCAGGGACGGCTTCGATCGGATGACGTGGGAGATCACGCCCGAAGTCGTGCCGACCCAGG TCAACGCCAGTTACTACTGGGCCAACCAGTTGTCGTCGCAACACGGCGGGCACGCGATCTACACCGGCATCCAGCCGCGC ACCCGCAGCACCAACGTGGTGATCTTCAGCGCGTTCGGCACCGGCACGGCGCCGCTGTCGGCGAATTGCCGCGGCGGCGC CGACGGCGGCTCCGGCACGTCGTGCTCGATCGCCTACCCGTGGAAAACCGGCCACGCCTATCGGCTGCAGGTCACCGTGA CACAGGCCAATCGCAGCGACGGGCGCTCGACCGTCGACGGCTTCATCACGGACGTCGCCACCGGCGCCACGACGCCGACC GGCAGTATCGCGGTGCCGGCGGACTGGGGCGGCCTGTCGAGCTCGGCGTACCTGTTCGACGAGTACTTCCCGTTCAACGC CGCGTCGAAGGACCCGATGCAGCGGCCGTGCGTGCCGTATGCGCGCTACATGACGTCGCTGCCGCATTTCTACCTGAAGG ATGTGGACTACCCGACGACCGAGCGGTCGATCCGGCTGAATACGGGCAAGGACAAGTGCGCGGTGCTGTCGGGCACGCCG AACGCGCGGGCCACGCTGGTCAACACGACGACCTATCTGTTGGAGAACGGCTTCCTGCCCGGGAGCCCGGGCGCGCCGAA ATAA
Upstream 100 bases:
>100_bases CCATTGGTAATAAAGTGACCGCAAATTGGTACACGAGCAGCGGCACCGCACTCGACGCTGCTCGTCGCGGTCTCTTTTTC CACCAACCGGAAACAGGAAC
Downstream 100 bases:
>100_bases CGGGCGGACGCGGAAAACAAAAAACCCGGCATGGAGCCGGGTTTTTCGTGGACGAGGTGCGCATCGGTCAATTGCGCGGC ACATCGTCTGGTGTGCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKRLSTVFGALLAVSATLNAHADPSITASAASTPRDGFDRMTWEITPEVVPTQVNASYYWANQLSSQHGGHAIYTGIQPR TRSTNVVIFSAFGTGTAPLSANCRGGADGGSGTSCSIAYPWKTGHAYRLQVTVTQANRSDGRSTVDGFITDVATGATTPT GSIAVPADWGGLSSSAYLFDEYFPFNAASKDPMQRPCVPYARYMTSLPHFYLKDVDYPTTERSIRLNTGKDKCAVLSGTP NARATLVNTTTYLLENGFLPGSPGAPK
Sequences:
>Translated_267_residues MKRLSTVFGALLAVSATLNAHADPSITASAASTPRDGFDRMTWEITPEVVPTQVNASYYWANQLSSQHGGHAIYTGIQPR TRSTNVVIFSAFGTGTAPLSANCRGGADGGSGTSCSIAYPWKTGHAYRLQVTVTQANRSDGRSTVDGFITDVATGATTPT GSIAVPADWGGLSSSAYLFDEYFPFNAASKDPMQRPCVPYARYMTSLPHFYLKDVDYPTTERSIRLNTGKDKCAVLSGTP NARATLVNTTTYLLENGFLPGSPGAPK >Mature_267_residues MKRLSTVFGALLAVSATLNAHADPSITASAASTPRDGFDRMTWEITPEVVPTQVNASYYWANQLSSQHGGHAIYTGIQPR TRSTNVVIFSAFGTGTAPLSANCRGGADGGSGTSCSIAYPWKTGHAYRLQVTVTQANRSDGRSTVDGFITDVATGATTPT GSIAVPADWGGLSSSAYLFDEYFPFNAASKDPMQRPCVPYARYMTSLPHFYLKDVDYPTTERSIRLNTGKDKCAVLSGTP NARATLVNTTTYLLENGFLPGSPGAPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28380; Mature: 28380
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLSTVFGALLAVSATLNAHADPSITASAASTPRDGFDRMTWEITPEVVPTQVNASYYW CCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEECCEEEE ANQLSSQHGGHAIYTGIQPRTRSTNVVIFSAFGTGTAPLSANCRGGADGGSGTSCSIAYP HHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEC WKTGHAYRLQVTVTQANRSDGRSTVDGFITDVATGATTPTGSIAVPADWGGLSSSAYLFD CCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEE EYFPFNAASKDPMQRPCVPYARYMTSLPHFYLKDVDYPTTERSIRLNTGKDKCAVLSGTP ECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCCEEEEECCC NARATLVNTTTYLLENGFLPGSPGAPK CCCEEEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKRLSTVFGALLAVSATLNAHADPSITASAASTPRDGFDRMTWEITPEVVPTQVNASYYW CCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEECCEEEE ANQLSSQHGGHAIYTGIQPRTRSTNVVIFSAFGTGTAPLSANCRGGADGGSGTSCSIAYP HHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEC WKTGHAYRLQVTVTQANRSDGRSTVDGFITDVATGATTPTGSIAVPADWGGLSSSAYLFD CCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEE EYFPFNAASKDPMQRPCVPYARYMTSLPHFYLKDVDYPTTERSIRLNTGKDKCAVLSGTP ECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCCEEEEECCC NARATLVNTTTYLLENGFLPGSPGAPK CCCEEEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA