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The map label for this gene is yrdA [C]

Identifier: 116690124

GI number: 116690124

Start: 2334017

End: 2334541

Strand: Direct

Name: yrdA [C]

Synonym: Bcen2424_2103

Alternate gene names: 116690124

Gene position: 2334017-2334541 (Clockwise)

Preceding gene: 116690113

Following gene: 116690125

Centisome position: 66.99

GC content: 65.14

Gene sequence:

>525_bases
GTGACGATCTACAAGCTGGGCGAGACGGCCCCGACGATCCACGAAAGCGTATTCGTCGCCGATACGGCGGCCATCATCGG
CAAGGTCGTGCTCGAGGAAAACGCGAGCGTGTGGTTCGGCGCGACGATTCGCGGCGACAACGAGACGATCACGGTCGGCG
CCGGCAGCAACGTCCAGGAAGGCGCGGTCCTGCATACCGACCCCGGCTTTCCGCTGACGATTGCCGAGAACGTGACGATC
GGGCACCAGGCGATGCTGCACGGCTGCACGATCGGCGAAGGTTCGCTGGTCGGGATTCAGGCGGTGGTCTTGAATGGAGC
GGTCATCGGCCGCAACTGTCTGGTGGGTGCCGGCGCGGTCGTGACGGAAGGCAAGACGTTCCCGGACAACTCGCTGATTC
TCGGCGCACCGGCGAAAGTCGTGCGCGAGCTGTCGGCCGAAGACGTCGCGCGGCTGCGCGCGAACGCGAAGACGTATGTC
GAGCGACGCGCGCATTTCAAGGAGCAACTCGTGCGGATCGGGTGA

Upstream 100 bases:

>100_bases
CGACGGTTTACAATATGCGTTTGTTCCGCGGCGCCAGGCGCCGGGCAAACCGGACGCGCCATTCTACCGGCGCCCATCAT
CGAAGAGACAAGGAGACTCC

Downstream 100 bases:

>100_bases
TTCGCACGGATTTCAAGGAAGAAGAGTGAGCGACCAGTTACAGAAATTCATGTTCAATGCGGCGCCCGTGCGCGGCGAGA
TCGTTTCGCTGCGCAACACG

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTIYKLGETAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGAGSNVQEGAVLHTDPGFPLTIAENVTI
GHQAMLHGCTIGEGSLVGIQAVVLNGAVIGRNCLVGAGAVVTEGKTFPDNSLILGAPAKVVRELSAEDVARLRANAKTYV
ERRAHFKEQLVRIG

Sequences:

>Translated_174_residues
MTIYKLGETAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGAGSNVQEGAVLHTDPGFPLTIAENVTI
GHQAMLHGCTIGEGSLVGIQAVVLNGAVIGRNCLVGAGAVVTEGKTFPDNSLILGAPAKVVRELSAEDVARLRANAKTYV
ERRAHFKEQLVRIG
>Mature_173_residues
TIYKLGETAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGAGSNVQEGAVLHTDPGFPLTIAENVTIG
HQAMLHGCTIGEGSLVGIQAVVLNGAVIGRNCLVGAGAVVTEGKTFPDNSLILGAPAKVVRELSAEDVARLRANAKTYVE
RRAHFKEQLVRIG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=166, Percent_Identity=39.7590361445783, Blast_Score=136, Evalue=7e-34,
Organism=Escherichia coli, GI1787667, Length=159, Percent_Identity=42.1383647798742, Blast_Score=125, Evalue=1e-30,
Organism=Escherichia coli, GI87081681, Length=163, Percent_Identity=36.8098159509202, Blast_Score=110, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18200; Mature: 18069

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYKLGETAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGAGSNVQE
CEEEECCCCCCCHHHEEEEHHHHHHHHHHEEECCCCEEEEEEEECCCCEEEEECCCCCCC
GAVLHTDPGFPLTIAENVTIGHQAMLHGCTIGEGSLVGIQAVVLNGAVIGRNCLVGAGAV
CEEEEECCCCCEEEECCCEECCHHHEEECCCCCCCEEEEEEEEECCEEECCCEEEECCEE
VTEGKTFPDNSLILGAPAKVVRELSAEDVARLRANAKTYVERRAHFKEQLVRIG
EECCCCCCCCCEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIYKLGETAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGAGSNVQE
EEEECCCCCCCHHHEEEEHHHHHHHHHHEEECCCCEEEEEEEECCCCEEEEECCCCCCC
GAVLHTDPGFPLTIAENVTIGHQAMLHGCTIGEGSLVGIQAVVLNGAVIGRNCLVGAGAV
CEEEEECCCCCEEEECCCEECCHHHEEECCCCCCCEEEEEEEEECCEEECCCEEEECCEE
VTEGKTFPDNSLILGAPAKVVRELSAEDVARLRANAKTYVERRAHFKEQLVRIG
EECCCCCCCCCEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]