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The map label for this gene is cyaB [H]

Identifier: 116690092

GI number: 116690092

Start: 2298301

End: 2299188

Strand: Reverse

Name: cyaB [H]

Synonym: Bcen2424_2071

Alternate gene names: 116690092

Gene position: 2299188-2298301 (Counterclockwise)

Preceding gene: 116690093

Following gene: 116690091

Centisome position: 65.99

GC content: 63.29

Gene sequence:

>888_bases
ATGAAAAGAAGAGCTTCAAGAGGCTGGTCGGCGCTGATGGCCATGGGCGCGGCGCTGAGCCTGTCAGGTTGTAATTTAGA
TGTACTAAATCCGAAAGGAAGCGTGGGTGCGGCTGAAAAGGCGCTGATCGCGACGTCCACCTGGGCGATGCTGATCGTCG
TCGTGCCGGTGATCCTGCTCACGCTATGGTTCGCGTGGCGTTACCGCGCGTCGAACCGCAACGCCGCCTACGCGCCGCAC
TGGTCGCACTCGACCGCGATCGAGGTCGTGATCTGGACGGTGCCGACGCTGATCATCCTGTTCCTCGGTGTGCTCACGTG
GAAGACCACGCACGAGCTCGATCCGTACAAGCCGCTCGAATCGGCGGTGAAGCCGATCGACGTGGAAGTGGTCGCGCTCG
ACTGGAAGTGGCTGTTCATCTATCCGGAACTCGGTATCGCGTCGGTGAACCAGCTCGCGATTCCGGTCGGCACGCCGGTG
AACTTCCGCATCACGTCGGATTCGGTGATGAACTCGTTCTTCATCCCGCAGCTCGGCGGCCAGGTCTACGCGATGGCCGG
CATGCAGACGCGCCTGCACCTGATCGCCGACGAGCCCGGCAACTACGCGGGCACGTCCGCCAACTTCAGCGGCCGCGGTT
TCTCCGACATGAAGTTCCGCACGCTCGCCGAGCCGCGCGAGCAGTTCGATGCGTGGGTGCAGAAGGTGAAGGCGTCGCCG
GACCGGCTCGACGCGACTATGTACGGCGGCGTCGCGCAGCCGAGCGAGAAGGCGCCGGTGCGCTATTTCTCGTCGGTCGA
TCCGCGGCTCTTCCACAACATCATCGCGAAATACAACGATGGCCACGTCCTCGACCTGAAGGACGCCGCCTGCGGCACGA
AGGGGTAA

Upstream 100 bases:

>100_bases
TTTTTCATCGCACTCGCGCGACGTATGATTCGGCCAATTTCGTGAATCGAATGCGCATCGGGCATACGCAAACGGATTCA
ATGACCCGCGGGGCTGTGTG

Downstream 100 bases:

>100_bases
CGCATGTTCGGCAAACTCACACTCTCGGCGATCCCGTTCGATCAGCCCATCATCATGGGGGCCGGCGCCTTCATGGGTCT
GGTCGTGCTGGGCATTCTCG

Product: ubiquinol oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome A1 subunit 2; Oxidase BA(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKRRASRGWSALMAMGAALSLSGCNLDVLNPKGSVGAAEKALIATSTWAMLIVVVPVILLTLWFAWRYRASNRNAAYAPH
WSHSTAIEVVIWTVPTLIILFLGVLTWKTTHELDPYKPLESAVKPIDVEVVALDWKWLFIYPELGIASVNQLAIPVGTPV
NFRITSDSVMNSFFIPQLGGQVYAMAGMQTRLHLIADEPGNYAGTSANFSGRGFSDMKFRTLAEPREQFDAWVQKVKASP
DRLDATMYGGVAQPSEKAPVRYFSSVDPRLFHNIIAKYNDGHVLDLKDAACGTKG

Sequences:

>Translated_295_residues
MKRRASRGWSALMAMGAALSLSGCNLDVLNPKGSVGAAEKALIATSTWAMLIVVVPVILLTLWFAWRYRASNRNAAYAPH
WSHSTAIEVVIWTVPTLIILFLGVLTWKTTHELDPYKPLESAVKPIDVEVVALDWKWLFIYPELGIASVNQLAIPVGTPV
NFRITSDSVMNSFFIPQLGGQVYAMAGMQTRLHLIADEPGNYAGTSANFSGRGFSDMKFRTLAEPREQFDAWVQKVKASP
DRLDATMYGGVAQPSEKAPVRYFSSVDPRLFHNIIAKYNDGHVLDLKDAACGTKG
>Mature_295_residues
MKRRASRGWSALMAMGAALSLSGCNLDVLNPKGSVGAAEKALIATSTWAMLIVVVPVILLTLWFAWRYRASNRNAAYAPH
WSHSTAIEVVIWTVPTLIILFLGVLTWKTTHELDPYKPLESAVKPIDVEVVALDWKWLFIYPELGIASVNQLAIPVGTPV
NFRITSDSVMNSFFIPQLGGQVYAMAGMQTRLHLIADEPGNYAGTSANFSGRGFSDMKFRTLAEPREQFDAWVQKVKASP
DRLDATMYGGVAQPSEKAPVRYFSSVDPRLFHNIIAKYNDGHVLDLKDAACGTKG

Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=288, Percent_Identity=57.2916666666667, Blast_Score=336, Evalue=1e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 32473; Mature: 32473

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRASRGWSALMAMGAALSLSGCNLDVLNPKGSVGAAEKALIATSTWAMLIVVVPVILL
CCCCCCCCHHHHHHHHHHEEECCCCEEEECCCCCCCCCHHHEEHHHHHHHHHHHHHHHHH
TLWFAWRYRASNRNAAYAPHWSHSTAIEVVIWTVPTLIILFLGVLTWKTTHELDPYKPLE
HHHHHHHHCCCCCCCEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
SAVKPIDVEVVALDWKWLFIYPELGIASVNQLAIPVGTPVNFRITSDSVMNSFFIPQLGG
HCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHCCCCCCC
QVYAMAGMQTRLHLIADEPGNYAGTSANFSGRGFSDMKFRTLAEPREQFDAWVQKVKASP
CEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
DRLDATMYGGVAQPSEKAPVRYFSSVDPRLFHNIIAKYNDGHVLDLKDAACGTKG
CHHCHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MKRRASRGWSALMAMGAALSLSGCNLDVLNPKGSVGAAEKALIATSTWAMLIVVVPVILL
CCCCCCCCHHHHHHHHHHEEECCCCEEEECCCCCCCCCHHHEEHHHHHHHHHHHHHHHHH
TLWFAWRYRASNRNAAYAPHWSHSTAIEVVIWTVPTLIILFLGVLTWKTTHELDPYKPLE
HHHHHHHHCCCCCCCEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
SAVKPIDVEVVALDWKWLFIYPELGIASVNQLAIPVGTPVNFRITSDSVMNSFFIPQLGG
HCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHCCCCCCC
QVYAMAGMQTRLHLIADEPGNYAGTSANFSGRGFSDMKFRTLAEPREQFDAWVQKVKASP
CEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
DRLDATMYGGVAQPSEKAPVRYFSSVDPRLFHNIIAKYNDGHVLDLKDAACGTKG
CHHCHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8392509 [H]