| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is lplT [H]
Identifier: 116690061
GI number: 116690061
Start: 2264440
End: 2265747
Strand: Direct
Name: lplT [H]
Synonym: Bcen2424_2040
Alternate gene names: 116690061
Gene position: 2264440-2265747 (Clockwise)
Preceding gene: 116690057
Following gene: 116690062
Centisome position: 65.0
GC content: 65.14
Gene sequence:
>1308_bases ATGAAAAAAGGTTTTTACACCATCATGGCCGCGCAGTTTTTCTCGTCGCTGGCCGACAATGCGCTTCTCATCGCCGCCAT CGCCCTGCTGAAAGACCTCCACGCCCCCAACTGGATGACACCGCTGCTGAAGCTGTTCTTCGTGTTGTCGTATGTGGTGT TGGCGGCGTATGTCGGTGCGTTCGCGGATTCGCGCCCGAAGGGCCGCGTGATGTTCATCACCAACTCGATCAAGGTGGTC GGCTGCCTGATCATGCTGTTCGGCGCCCACCCGCTGATCGCGTACGGGATCGTCGGCTTCGGCGCGGCGGCCTACTCGCC CGCCAAATACGGGATTCTCACCGAACTGCTGCCGGCCGACCGGCTGGTCGCCGCGAACGGCTGGATCGAGGGCACGACCG TCAGCTCGATCATCCTCGGCACCGTGCTCGGGGGCGCGCTGATCAGCCCGCACATCGCATCGCACGTGATCGCCCATACT CCCGCCTGGATCGGCACGCCCGCCGAGGCCGCGATGGCGATCATCATGGCAATCTACGTGGTCGCCGCGCTGTTCAACCT GCGCATTCCGGACACGGGCGCCCGCTACCCGAAGCAGGAGCGCGGCCCGGTCAAGCTGCTCACCGATTTCGCCGACTGCT TCATGGTGCTCTGGCGCGACAAGCTCGGCCAGATCTCGCTGGCGGTCACCACGCTGTTCTGGGGGGCGGGCGCGACGCTG CAGTTCATCGTGCTGAAGTGGGCCGAGGTGTCGCTCAACATGTCGCTGTCCGAAGGCGCGATCCTGCAGGCCGTAGTCGC GGTCGGCGTGGCGGGCGGCGCGATCGCCGCCGCTGCCCGGATTCCGCTGAAGAAGTCGCTGACCGTACTGCCCGTCGGCA TCATCATGGGCATCGCGGTGATGCTGATGGCGTTCTACACGCGCGACCTGTTCCCGGCGCAGTGGGCCGTGCACTTCGGC CATCTGCGCCTGCCGTTCTACCTGATCGTCGCCTACATCTTCCTGATCGGCGTCGGCGCGCTGTCCGGCTACTTCGTCGT GCCGATGAACGCGCTGCTGCAGCATCGCGGCCACGTGCTGCTGTCGGCCGGCCATTCGATCGCGGTGCAGAACTTCAACG AGAACCTGTCGGTGCTCGTGATGCTGTGCCTGTATGCGGTGCTCGTGTGGCTCGACGTGCCGGTCGGCGTCGTGATCGTG CTGTTCGGCACGTTCGTCTGCCTGACGATGTGGCTCGTGATGCGCCGCCACCAGGCGAACCAGCGTCAGTTCGACTCGGT CGCGCTGATCGGCGAATCGCGGCACTGA
Upstream 100 bases:
>100_bases GTTATAAAGCCGTGCGCACAACCCATTTCGAACGGAATAAGCCGATCGCATACCAGGCGGCCTACGCGGCCCTGCCGCAG CGACGAAAGCATCGCATCAG
Downstream 100 bases:
>100_bases CGCTACACTTTCCGTTTTCGTCCGCCGGCGCCGGTGCTCACACCGGCGCGTTGCCCTCATGACGCACCCGATACCCAACC TCCTGACGATCGCCGGCTCC
Product: lysophospholipid transporter LplT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKKGFYTIMAAQFFSSLADNALLIAAIALLKDLHAPNWMTPLLKLFFVLSYVVLAAYVGAFADSRPKGRVMFITNSIKVV GCLIMLFGAHPLIAYGIVGFGAAAYSPAKYGILTELLPADRLVAANGWIEGTTVSSIILGTVLGGALISPHIASHVIAHT PAWIGTPAEAAMAIIMAIYVVAALFNLRIPDTGARYPKQERGPVKLLTDFADCFMVLWRDKLGQISLAVTTLFWGAGATL QFIVLKWAEVSLNMSLSEGAILQAVVAVGVAGGAIAAAARIPLKKSLTVLPVGIIMGIAVMLMAFYTRDLFPAQWAVHFG HLRLPFYLIVAYIFLIGVGALSGYFVVPMNALLQHRGHVLLSAGHSIAVQNFNENLSVLVMLCLYAVLVWLDVPVGVVIV LFGTFVCLTMWLVMRRHQANQRQFDSVALIGESRH
Sequences:
>Translated_435_residues MKKGFYTIMAAQFFSSLADNALLIAAIALLKDLHAPNWMTPLLKLFFVLSYVVLAAYVGAFADSRPKGRVMFITNSIKVV GCLIMLFGAHPLIAYGIVGFGAAAYSPAKYGILTELLPADRLVAANGWIEGTTVSSIILGTVLGGALISPHIASHVIAHT PAWIGTPAEAAMAIIMAIYVVAALFNLRIPDTGARYPKQERGPVKLLTDFADCFMVLWRDKLGQISLAVTTLFWGAGATL QFIVLKWAEVSLNMSLSEGAILQAVVAVGVAGGAIAAAARIPLKKSLTVLPVGIIMGIAVMLMAFYTRDLFPAQWAVHFG HLRLPFYLIVAYIFLIGVGALSGYFVVPMNALLQHRGHVLLSAGHSIAVQNFNENLSVLVMLCLYAVLVWLDVPVGVVIV LFGTFVCLTMWLVMRRHQANQRQFDSVALIGESRH >Mature_435_residues MKKGFYTIMAAQFFSSLADNALLIAAIALLKDLHAPNWMTPLLKLFFVLSYVVLAAYVGAFADSRPKGRVMFITNSIKVV GCLIMLFGAHPLIAYGIVGFGAAAYSPAKYGILTELLPADRLVAANGWIEGTTVSSIILGTVLGGALISPHIASHVIAHT PAWIGTPAEAAMAIIMAIYVVAALFNLRIPDTGARYPKQERGPVKLLTDFADCFMVLWRDKLGQISLAVTTLFWGAGATL QFIVLKWAEVSLNMSLSEGAILQAVVAVGVAGGAIAAAARIPLKKSLTVLPVGIIMGIAVMLMAFYTRDLFPAQWAVHFG HLRLPFYLIVAYIFLIGVGALSGYFVVPMNALLQHRGHVLLSAGHSIAVQNFNENLSVLVMLCLYAVLVWLDVPVGVVIV LFGTFVCLTMWLVMRRHQANQRQFDSVALIGESRH
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=420, Percent_Identity=37.8571428571429, Blast_Score=247, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46937; Mature: 46937
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGFYTIMAAQFFSSLADNALLIAAIALLKDLHAPNWMTPLLKLFFVLSYVVLAAYVGA CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH FADSRPKGRVMFITNSIKVVGCLIMLFGAHPLIAYGIVGFGAAAYSPAKYGILTELLPAD HCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHCCCC RLVAANGWIEGTTVSSIILGTVLGGALISPHIASHVIAHTPAWIGTPAEAAMAIIMAIYV CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VAALFNLRIPDTGARYPKQERGPVKLLTDFADCFMVLWRDKLGQISLAVTTLFWGAGATL HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH QFIVLKWAEVSLNMSLSEGAILQAVVAVGVAGGAIAAAARIPLKKSLTVLPVGIIMGIAV HHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHH MLMAFYTRDLFPAQWAVHFGHLRLPFYLIVAYIFLIGVGALSGYFVVPMNALLQHRGHVL HHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHCCCEE LSAGHSIAVQNFNENLSVLVMLCLYAVLVWLDVPVGVVIVLFGTFVCLTMWLVMRRHQAN EECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC QRQFDSVALIGESRH HHHCCCEEEECCCCC >Mature Secondary Structure MKKGFYTIMAAQFFSSLADNALLIAAIALLKDLHAPNWMTPLLKLFFVLSYVVLAAYVGA CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH FADSRPKGRVMFITNSIKVVGCLIMLFGAHPLIAYGIVGFGAAAYSPAKYGILTELLPAD HCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHCCCC RLVAANGWIEGTTVSSIILGTVLGGALISPHIASHVIAHTPAWIGTPAEAAMAIIMAIYV CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VAALFNLRIPDTGARYPKQERGPVKLLTDFADCFMVLWRDKLGQISLAVTTLFWGAGATL HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH QFIVLKWAEVSLNMSLSEGAILQAVVAVGVAGGAIAAAARIPLKKSLTVLPVGIIMGIAV HHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHH MLMAFYTRDLFPAQWAVHFGHLRLPFYLIVAYIFLIGVGALSGYFVVPMNALLQHRGHVL HHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHCCCEE LSAGHSIAVQNFNENLSVLVMLCLYAVLVWLDVPVGVVIVLFGTFVCLTMWLVMRRHQAN EECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC QRQFDSVALIGESRH HHHCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA