| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is btuE [C]
Identifier: 116690056
GI number: 116690056
Start: 2258593
End: 2259072
Strand: Reverse
Name: btuE [C]
Synonym: Bcen2424_2035
Alternate gene names: 116690056
Gene position: 2259072-2258593 (Counterclockwise)
Preceding gene: 116690058
Following gene: 116690048
Centisome position: 64.84
GC content: 62.92
Gene sequence:
>480_bases ATGTCCACCCTGTATTCGTTCAGCGCAGAGACGCTCGCCGGCGCGCCGGTATCGCTCGACGCGTATCGCGGCAAGGTGCT GCTGATCGTCAATACCGCGAGCGAGTGCGGTTTCACGCCGCAGTACGCGGGTCTGCAGAAGCTGTACGACCAGTACGCGG CGCGCGGCTTCTTCGTGCTCGGCTTCCCGTGCAACCAGTTCGGCAAGCAGGAGCCGGGCGATGCCGCGCAGATCGGGGCA TTCTGCGAGCGCAACTACGGCGTCACGTTCCCGATGTTCGCGAAGATCGACGTGAAGGGCGACCATGCGCATCCGCTGTA TCGCTACCTGACCGACGAGGCGCCCGGCATTCTCGGCCTCAAGGCGATCAAGTGGAATTTCACGAAATTCCTGATCGACC GCGAAGGGCGCATCGTCAAGCGCTACGCGCCGTCCACCAAGCCCGATGAAATCGCAGCGGACATCGACAAGCTGCTGTGA
Upstream 100 bases:
>100_bases CGCGCGCCGGTCGCGCCGGGCATCGGCCGTTCGGCGGATGCCGCAACGGCGCAATTTCGCCTAGACTCCACGTCGATCGG TTTCGTAAAAGGAGTGCCCG
Downstream 100 bases:
>100_bases CGGCGATGCGCGGCGTGCGCCGCGCCGGTGCGGATCGTGCGTGCGCCGCCGTTACAGGATCGGCGCGAACAACCGCGCGA CGTGCATCGCGATGCGCCGC
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSTLYSFSAETLAGAPVSLDAYRGKVLLIVNTASECGFTPQYAGLQKLYDQYAARGFFVLGFPCNQFGKQEPGDAAQIGA FCERNYGVTFPMFAKIDVKGDHAHPLYRYLTDEAPGILGLKAIKWNFTKFLIDREGRIVKRYAPSTKPDEIAADIDKLL
Sequences:
>Translated_159_residues MSTLYSFSAETLAGAPVSLDAYRGKVLLIVNTASECGFTPQYAGLQKLYDQYAARGFFVLGFPCNQFGKQEPGDAAQIGA FCERNYGVTFPMFAKIDVKGDHAHPLYRYLTDEAPGILGLKAIKWNFTKFLIDREGRIVKRYAPSTKPDEIAADIDKLL >Mature_158_residues STLYSFSAETLAGAPVSLDAYRGKVLLIVNTASECGFTPQYAGLQKLYDQYAARGFFVLGFPCNQFGKQEPGDAAQIGAF CERNYGVTFPMFAKIDVKGDHAHPLYRYLTDEAPGILGLKAIKWNFTKFLIDREGRIVKRYAPSTKPDEIAADIDKLL
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI75709200, Length=156, Percent_Identity=48.7179487179487, Blast_Score=142, Evalue=2e-34, Organism=Homo sapiens, GI90903240, Length=156, Percent_Identity=48.7179487179487, Blast_Score=141, Evalue=2e-34, Organism=Homo sapiens, GI15618997, Length=157, Percent_Identity=43.9490445859873, Blast_Score=135, Evalue=1e-32, Organism=Homo sapiens, GI192455698, Length=160, Percent_Identity=40, Blast_Score=135, Evalue=2e-32, Organism=Homo sapiens, GI90903238, Length=131, Percent_Identity=48.8549618320611, Blast_Score=117, Evalue=6e-27, Organism=Homo sapiens, GI41406084, Length=186, Percent_Identity=37.0967741935484, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI4557629, Length=178, Percent_Identity=35.3932584269663, Blast_Score=97, Evalue=6e-21, Organism=Homo sapiens, GI6006001, Length=178, Percent_Identity=34.2696629213483, Blast_Score=95, Evalue=2e-20, Organism=Homo sapiens, GI32967607, Length=181, Percent_Identity=32.5966850828729, Blast_Score=87, Evalue=8e-18, Organism=Homo sapiens, GI33186887, Length=177, Percent_Identity=31.638418079096, Blast_Score=84, Evalue=6e-17, Organism=Homo sapiens, GI41406082, Length=70, Percent_Identity=54.2857142857143, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1788003, Length=167, Percent_Identity=39.5209580838323, Blast_Score=144, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17506887, Length=160, Percent_Identity=46.25, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17535473, Length=160, Percent_Identity=43.75, Blast_Score=144, Evalue=2e-35, Organism=Caenorhabditis elegans, GI193210707, Length=162, Percent_Identity=44.4444444444444, Blast_Score=134, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71993584, Length=158, Percent_Identity=41.1392405063291, Blast_Score=132, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17550320, Length=181, Percent_Identity=33.7016574585635, Blast_Score=109, Evalue=7e-25, Organism=Caenorhabditis elegans, GI193209493, Length=181, Percent_Identity=34.2541436464088, Blast_Score=108, Evalue=9e-25, Organism=Caenorhabditis elegans, GI71993573, Length=95, Percent_Identity=41.0526315789474, Blast_Score=78, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71999642, Length=76, Percent_Identity=40.7894736842105, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193210709, Length=72, Percent_Identity=51.3888888888889, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6319721, Length=158, Percent_Identity=51.2658227848101, Blast_Score=186, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6322228, Length=159, Percent_Identity=50.314465408805, Blast_Score=185, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6322826, Length=159, Percent_Identity=45.2830188679245, Blast_Score=161, Evalue=5e-41, Organism=Drosophila melanogaster, GI24656772, Length=160, Percent_Identity=46.875, Blast_Score=150, Evalue=5e-37, Organism=Drosophila melanogaster, GI24656777, Length=160, Percent_Identity=46.875, Blast_Score=150, Evalue=5e-37, Organism=Drosophila melanogaster, GI24656767, Length=160, Percent_Identity=46.875, Blast_Score=149, Evalue=5e-37, Organism=Drosophila melanogaster, GI85726443, Length=159, Percent_Identity=44.0251572327044, Blast_Score=129, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 17614; Mature: 17483
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1 ; PS00763 GLUTATHIONE_PEROXID_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLYSFSAETLAGAPVSLDAYRGKVLLIVNTASECGFTPQYAGLQKLYDQYAARGFFVL CCCCCCCCCHHHCCCCEEEECCCCEEEEEEECCHHCCCCCCHHHHHHHHHHHHHCEEEEE GFPCNQFGKQEPGDAAQIGAFCERNYGVTFPMFAKIDVKGDHAHPLYRYLTDEAPGILGL ECCHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEE KAIKWNFTKFLIDREGRIVKRYAPSTKPDEIAADIDKLL EEEEECCEEEEECCCCCEEEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure STLYSFSAETLAGAPVSLDAYRGKVLLIVNTASECGFTPQYAGLQKLYDQYAARGFFVL CCCCCCCCHHHCCCCEEEECCCCEEEEEEECCHHCCCCCCHHHHHHHHHHHHHCEEEEE GFPCNQFGKQEPGDAAQIGAFCERNYGVTFPMFAKIDVKGDHAHPLYRYLTDEAPGILGL ECCHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEE KAIKWNFTKFLIDREGRIVKRYAPSTKPDEIAADIDKLL EEEEECCEEEEECCCCCEEEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]