| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690048
Identifier: 116690048
GI number: 116690048
Start: 2250085
End: 2251101
Strand: Reverse
Name: 116690048
Synonym: Bcen2424_2027
Alternate gene names: NA
Gene position: 2251101-2250085 (Counterclockwise)
Preceding gene: 116690056
Following gene: 116690047
Centisome position: 64.61
GC content: 69.91
Gene sequence:
>1017_bases GTGGAAGAAGCTGCCTGTCAACAGCCTGCCTTTCCTTCCCGCCATCAATGGCGGGGTTTCTCGGAGCAAATTCTGATGAA CAACGCGGTACGCGGCAGCCTGCCGACGCTGGCCATCCTGATCGGCGCGTCGGTATGGGGCCTGATCTGGTATCCGCTGC GGATTCTCGCGTCGCTCGGCGTGACGGGCACGCTGGCCAGCGCGCTGACGAGCCTCGTCGCCTTCCTGTTCGTGATCGTC GCGCGGCACCGCACGATCGCGACGCTGCGCTGGCACTGGGTGCTGCCGGGCATCGCGGTGACGGCCGGCGTGACGAACCT CGGGTTCGTATGGGGCACGATCCACGGCGAGGTGCTGCGCGTGATGCTGCTGTTCTACCTGACGCCGGCCTGGACCGCGA TCTACGCGCACTTCCTGCTGCGCGAGCGGCTGACCTGGGCCGGCGCGGGGCTCGCGGCGCTGTCGATCGGCGGCGCGATG CTGATGCTGTGGTCGCCGGCGCTCGGCTTGCCGCTGCCGGCCAACCCGGCCGAATGGGCCGGTCTCGCGGCCGGGCTGAG CTTCGCGATGAGCAACGTGCTGGTGATCAAGGCGAGCCGCGAGCTGCCCGACATGCGCGCCGAAATGCGCACCGCGACGC TGTTCGGCGGCGCGGCCATGTTCGGCGCGATCGCGTCGCTGTTCGAAGGGCTGCCGGCCGCGCCGGCGAGCGGCCAACTG GGCGTGGCCGCGCTGATCATCGCGGCGATCGGCGTGACGATGGCGTCGAACAACCTGCTCGTGCAGTACGGTCTCGCGCG CGTGCCGGCGAACCGCGCGTCGATCATCATGCTGTTCGAGATCGTGATCACCGCGCTGTCGGCGTGGGTGTTCGCGAACG AGCTGCCGAGCGCGCGCGAGTGGGCGGGCGGCGCGTGCATCGTGCTCGCGACGTTGCTGTCGAGCCGGGTCCATCGTGCC GCGCCGGCACCGGACAAACCCGGCGACGGTCGGGACGGCACACGCGCGATGGTATGA
Upstream 100 bases:
>100_bases TTCCAGACGTAGTTCACCGCGCGGCTCTGCTTGTTAAGCAGTCCGTTGAGCGACTTCACCCGGTAGCGGTAGACAAGGAT CATGCCGGTGATCCTAACCC
Downstream 100 bases:
>100_bases TGGAAGCCGTTTGCGGGGCCCAACGCTGGATGCGCGCGGCCCCGTTTTTGAATTCCGGGGCGCGTGGCGCGCAGGGGCTC TCCGGCCCCGCGCCGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MEEAACQQPAFPSRHQWRGFSEQILMNNAVRGSLPTLAILIGASVWGLIWYPLRILASLGVTGTLASALTSLVAFLFVIV ARHRTIATLRWHWVLPGIAVTAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFLLRERLTWAGAGLAALSIGGAM LMLWSPALGLPLPANPAEWAGLAAGLSFAMSNVLVIKASRELPDMRAEMRTATLFGGAAMFGAIASLFEGLPAAPASGQL GVAALIIAAIGVTMASNNLLVQYGLARVPANRASIIMLFEIVITALSAWVFANELPSAREWAGGACIVLATLLSSRVHRA APAPDKPGDGRDGTRAMV
Sequences:
>Translated_338_residues MEEAACQQPAFPSRHQWRGFSEQILMNNAVRGSLPTLAILIGASVWGLIWYPLRILASLGVTGTLASALTSLVAFLFVIV ARHRTIATLRWHWVLPGIAVTAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFLLRERLTWAGAGLAALSIGGAM LMLWSPALGLPLPANPAEWAGLAAGLSFAMSNVLVIKASRELPDMRAEMRTATLFGGAAMFGAIASLFEGLPAAPASGQL GVAALIIAAIGVTMASNNLLVQYGLARVPANRASIIMLFEIVITALSAWVFANELPSAREWAGGACIVLATLLSSRVHRA APAPDKPGDGRDGTRAMV >Mature_338_residues MEEAACQQPAFPSRHQWRGFSEQILMNNAVRGSLPTLAILIGASVWGLIWYPLRILASLGVTGTLASALTSLVAFLFVIV ARHRTIATLRWHWVLPGIAVTAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFLLRERLTWAGAGLAALSIGGAM LMLWSPALGLPLPANPAEWAGLAAGLSFAMSNVLVIKASRELPDMRAEMRTATLFGGAAMFGAIASLFEGLPAAPASGQL GVAALIIAAIGVTMASNNLLVQYGLARVPANRASIIMLFEIVITALSAWVFANELPSAREWAGGACIVLATLLSSRVHRA APAPDKPGDGRDGTRAMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35784; Mature: 35784
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEAACQQPAFPSRHQWRGFSEQILMNNAVRGSLPTLAILIGASVWGLIWYPLRILASLG CCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC VTGTLASALTSLVAFLFVIVARHRTIATLRWHWVLPGIAVTAGVTNLGFVWGTIHGEVLR CHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEHHCCCHHHHHCHHHHHHHHHHHHHHHHH VMLLFYLTPAWTAIYAHFLLRERLTWAGAGLAALSIGGAMLMLWSPALGLPLPANPAEWA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHCCCCCCCCCCCCHHHH GLAAGLSFAMSNVLVIKASRELPDMRAEMRTATLFGGAAMFGAIASLFEGLPAAPASGQL HHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH GVAALIIAAIGVTMASNNLLVQYGLARVPANRASIIMLFEIVITALSAWVFANELPSARE HHHHHHHHHHHHHHCCCCEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH WAGGACIVLATLLSSRVHRAAPAPDKPGDGRDGTRAMV HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEEAACQQPAFPSRHQWRGFSEQILMNNAVRGSLPTLAILIGASVWGLIWYPLRILASLG CCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC VTGTLASALTSLVAFLFVIVARHRTIATLRWHWVLPGIAVTAGVTNLGFVWGTIHGEVLR CHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEHHCCCHHHHHCHHHHHHHHHHHHHHHHH VMLLFYLTPAWTAIYAHFLLRERLTWAGAGLAALSIGGAMLMLWSPALGLPLPANPAEWA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHCCCCCCCCCCCCHHHH GLAAGLSFAMSNVLVIKASRELPDMRAEMRTATLFGGAAMFGAIASLFEGLPAAPASGQL HHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH GVAALIIAAIGVTMASNNLLVQYGLARVPANRASIIMLFEIVITALSAWVFANELPSARE HHHHHHHHHHHHHHCCCCEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH WAGGACIVLATLLSSRVHRAAPAPDKPGDGRDGTRAMV HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA