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The map label for this gene is omp85 [H]

Identifier: 116690032

GI number: 116690032

Start: 2226443

End: 2228752

Strand: Reverse

Name: omp85 [H]

Synonym: Bcen2424_2011

Alternate gene names: 116690032

Gene position: 2228752-2226443 (Counterclockwise)

Preceding gene: 116690033

Following gene: 116690031

Centisome position: 63.97

GC content: 63.38

Gene sequence:

>2310_bases
ATGTTGTTCAAACCTCATCGCTTTGTACCTAAGACAGTTGCAGCGGCCGCGCTCGCCGCGCACGGCCTCGCGGCGCATGC
AGCGGCACCGTTCGTGGTGCAAGACATCAAGATCGAGGGGCTGCAGCGCGTCGAAGCGGGTTCGGTGTTCGCCTATCTGC
CGATCAAGCAGGGCGATACCTTCACGGACGACAAGGCATCCGAAGCAATCCGCGCGTTGTACGCGACGGGCTTTTTCAAC
GACGTGCGCGTCGCCACGCAGGGCAACGTCGTGATCGTGCAGGTGCAGGAGCGTCCGGCCATCGCGTCGATCGACTTCAC
CGGCACGAAGGAATTCGACAAGGACAACCTGACGAAGGCGCTGCGCGCGGTCGGCCTCGCCGATGGCCGCTACTACGACA
AGGCGCTCGTCGACAAGGCGGAGCAGGAGCTCAAGCGCCAGTACCTGACGCGCGGCTTCTATGCGGCCGAGGTCAAGACG
ACGATCACGCCGGTCGACGCGAACCGCGTGTCGATCCTGTTCGCGGTGGCCGAAGGCCCGAGCGCGAAGATCCGCCAGAT
CAACTTCATCGGCAACAAGGCGTTCAGCACCAGCACGCTGCGCGACGAGATGCAGCTGTCGACGCCGAACTGGTTCTCCT
GGTACACGAAGAACGACCTGTACTCGAAGGAAAAGCTCACGGGCGACCTCGAGGCCGTGCGCTCGTACTACCTGAACCGC
GGCTACCTCGAGTTCAACATCGAGTCGACCCAGGTGTCGATCTCGCCGGACAAGAAGGACATGTACCTGACGGTCACGCT
GCACGAAGGCGAGCCGTACACGGTGTCGGGCATCAAGCTGTCGGGCAACCTGCTCGATCGCGAGGCCGAGCTCAACAAGC
TGATCAAGATCAAGCCGGGCGACCGCTTCTCGGCCGAAAAGCTGCAGCAGACCACCAAGTCGATCGTCGACAAGCTCGGT
GAATACGGCTACGCATTCGCGACCGTCAACGCGCAGCCGGACATCGACCAGGCGAACCACAAGGTGAACCTGAACCTCGT
CGTCGATCCGAGCCGCCGCGTGTACGTGCGCCGCATCAACGTGGTCGGCAACACGCGCACGCGCGACGAAGTGGTGCGCC
GCGAGATGCGCCAGCTCGAAAGCTCGTGGTTCGACTCGAACCGCCTCGCGCTGTCGAAGGACCGCGTGAACCGCCTCGGC
TACTTCACCAACGTCGACGTGACGACGGTGCCGGTCGAAGGCACGAACGACCAGGTCGACGTGAACGTGAAGGTCGACGA
AAAACCGACCGGCGCGATCACGCTGGGTGCCGGCTTCTCGTCGACGGACAAGGTCGTGCTGTCGGCCGGCGTGTCGCAGG
ACAACGTGTTCGGTTCGGGCACGAGCCTGTCGGTGAACGTCAACACCGCGAAGAGCTACCGCACGCTGACCGTCACGCAG
GTCGACCCGTACTTCACGGTCGATGGCATCAAGCGGATCACCGACGTCTTCTACCGCACGTACCAGCCGCTCTACTATTC
GACGAGCTCGAGCTTCCGGATCATCAGCGCGGGCGGCAACCTGAAGTTCGGCATTCCGTTCTCGGAAGTCGACACCGTCT
ACTTCGGCGCGGGCTTCGAGCAGAACCGCCTGGACGTCGATTCGAACACGCCGCAGAGCTACCAGGATTACGTGAACCAG
TTCGGCCGCGTGTCGAACACGGTGCCGCTGACGGTCGCATGGTCGCGCGACGCGCGTGACAGCGCGCTGATTCCGAGCCG
CGGCTACTTCACGCAGGCGAACATGGAGTACGGCGTGCCGGTCGGCAAGATCCAGTACTACAAGGCCGACCTGCAGGCGC
AGTACTACTATTCGTTCTCGCGCGGCTTCATCCTGGGCCTGAACCTGCAAGGCGGCTACGGTAACGGTATCGGTAACCCG
TACCCGATCTTCAAGAACTACTACGCGGGCGGTATCGGCTCCGTGCGTGGCTACGAGCCGAGCTCGCTGGGCCCGCGCGA
CACGAAGACGAACGATCCGATCGGCGGTTCGAAGATGCTGGTCGGCAACATCGAGCTGACGTTCCCGCTGCCGGGCACGG
GTTACGACCGCACGCTGCGCGTGTTCACGTTCCTCGACGGCGGTAACGTGTGGGGCAATGCGCCGGGCGGCACGAGTACG
GGCGCCAACGGCCTGCGTTACGGCTACGGTGTGGGTCTCGCGTGGATCTCGCCGATCGGCCCGCTGAAGCTGAGCCTGGG
CTTCCCGCTGCAGAAGCACGAAGGCGACCAGTACCAGAAATTCCAGTTCCAGATCGGGACGGCGTTCTGA

Upstream 100 bases:

>100_bases
GCGCTGTTCAACGATCTGGCTCGGTTAATCCATTTCTGAAGCGTCAGGCGGCGGCCGCTGGCCAGCCGCCCGATTTGATG
CAGCTAAATATTGGGGATGC

Downstream 100 bases:

>100_bases
CCGAACGCATGACAACAGCAACGAGAGGGTAATTTTGCTAACCGGTAAGTTTTCGAAACGAGTGATGTGCGCGCTGACCG
TTGCGCTGGCCCTGGGCGCG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 769; Mature: 769

Protein sequence:

>769_residues
MLFKPHRFVPKTVAAAALAAHGLAAHAAAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTFTDDKASEAIRALYATGFFN
DVRVATQGNVVIVQVQERPAIASIDFTGTKEFDKDNLTKALRAVGLADGRYYDKALVDKAEQELKRQYLTRGFYAAEVKT
TITPVDANRVSILFAVAEGPSAKIRQINFIGNKAFSTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLEAVRSYYLNR
GYLEFNIESTQVSISPDKKDMYLTVTLHEGEPYTVSGIKLSGNLLDREAELNKLIKIKPGDRFSAEKLQQTTKSIVDKLG
EYGYAFATVNAQPDIDQANHKVNLNLVVDPSRRVYVRRINVVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRVNRLG
YFTNVDVTTVPVEGTNDQVDVNVKVDEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKSYRTLTVTQ
VDPYFTVDGIKRITDVFYRTYQPLYYSTSSSFRIISAGGNLKFGIPFSEVDTVYFGAGFEQNRLDVDSNTPQSYQDYVNQ
FGRVSNTVPLTVAWSRDARDSALIPSRGYFTQANMEYGVPVGKIQYYKADLQAQYYYSFSRGFILGLNLQGGYGNGIGNP
YPIFKNYYAGGIGSVRGYEPSSLGPRDTKTNDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTST
GANGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF

Sequences:

>Translated_769_residues
MLFKPHRFVPKTVAAAALAAHGLAAHAAAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTFTDDKASEAIRALYATGFFN
DVRVATQGNVVIVQVQERPAIASIDFTGTKEFDKDNLTKALRAVGLADGRYYDKALVDKAEQELKRQYLTRGFYAAEVKT
TITPVDANRVSILFAVAEGPSAKIRQINFIGNKAFSTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLEAVRSYYLNR
GYLEFNIESTQVSISPDKKDMYLTVTLHEGEPYTVSGIKLSGNLLDREAELNKLIKIKPGDRFSAEKLQQTTKSIVDKLG
EYGYAFATVNAQPDIDQANHKVNLNLVVDPSRRVYVRRINVVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRVNRLG
YFTNVDVTTVPVEGTNDQVDVNVKVDEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKSYRTLTVTQ
VDPYFTVDGIKRITDVFYRTYQPLYYSTSSSFRIISAGGNLKFGIPFSEVDTVYFGAGFEQNRLDVDSNTPQSYQDYVNQ
FGRVSNTVPLTVAWSRDARDSALIPSRGYFTQANMEYGVPVGKIQYYKADLQAQYYYSFSRGFILGLNLQGGYGNGIGNP
YPIFKNYYAGGIGSVRGYEPSSLGPRDTKTNDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTST
GANGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF
>Mature_769_residues
MLFKPHRFVPKTVAAAALAAHGLAAHAAAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTFTDDKASEAIRALYATGFFN
DVRVATQGNVVIVQVQERPAIASIDFTGTKEFDKDNLTKALRAVGLADGRYYDKALVDKAEQELKRQYLTRGFYAAEVKT
TITPVDANRVSILFAVAEGPSAKIRQINFIGNKAFSTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLEAVRSYYLNR
GYLEFNIESTQVSISPDKKDMYLTVTLHEGEPYTVSGIKLSGNLLDREAELNKLIKIKPGDRFSAEKLQQTTKSIVDKLG
EYGYAFATVNAQPDIDQANHKVNLNLVVDPSRRVYVRRINVVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRVNRLG
YFTNVDVTTVPVEGTNDQVDVNVKVDEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKSYRTLTVTQ
VDPYFTVDGIKRITDVFYRTYQPLYYSTSSSFRIISAGGNLKFGIPFSEVDTVYFGAGFEQNRLDVDSNTPQSYQDYVNQ
FGRVSNTVPLTVAWSRDARDSALIPSRGYFTQANMEYGVPVGKIQYYKADLQAQYYYSFSRGFILGLNLQGGYGNGIGNP
YPIFKNYYAGGIGSVRGYEPSSLGPRDTKTNDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTST
GANGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Homo sapiens, GI225543166, Length=458, Percent_Identity=22.9257641921397, Blast_Score=72, Evalue=2e-12,
Organism=Escherichia coli, GI1786374, Length=817, Percent_Identity=36.3525091799266, Blast_Score=492, Evalue=1e-140,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 84992; Mature: 84992

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKPHRFVPKTVAAAALAAHGLAAHAAAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDT
CCCCCCCCCCHHHHHHHHHHHCHHHHCCCCEEEEEEEECCCEEECCCCEEEEEEECCCCC
FTDDKASEAIRALYATGFFNDVRVATQGNVVIVQVQERPAIASIDFTGTKEFDKDNLTKA
CCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHH
LRAVGLADGRYYDKALVDKAEQELKRQYLTRGFYAAEVKTTITPVDANRVSILFAVAEGP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCC
SAKIRQINFIGNKAFSTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLEAVRSYYLNR
CCEEEEEEEECCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHCC
GYLEFNIESTQVSISPDKKDMYLTVTLHEGEPYTVSGIKLSGNLLDREAELNKLIKIKPG
CEEEEEEECEEEEECCCCCCEEEEEEEECCCCEEEEEEEEECCEECCCCCCCCEEEECCC
DRFSAEKLQQTTKSIVDKLGEYGYAFATVNAQPDIDQANHKVNLNLVVDPSRRVYVRRIN
CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEE
VVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRVNRLGYFTNVDVTTVPVEGTNDQVD
EECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCEEECCCEEEEEECCCCCEEE
VNVKVDEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKSYRTLTVTQ
EEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCEECCCCEEEEEEECCCCEEEEEEEE
VDPYFTVDGIKRITDVFYRTYQPLYYSTSSSFRIISAGGNLKFGIPFSEVDTVYFGAGFE
ECCEEEHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCEEECCCHHHCCEEEEECCCC
QNRLDVDSNTPQSYQDYVNQFGRVSNTVPLTVAWSRDARDSALIPSRGYFTQANMEYGVP
CCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCEECCC
VGKIQYYKADLQAQYYYSFSRGFILGLNLQGGYGNGIGNPYPIFKNYYAGGIGSVRGYEP
CCEEEEEEECCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
SSLGPRDTKTNDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTST
CCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEECCCCCCCCC
GANGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF
CCCCCEECCCCCCCEECCCCCEEEEECCCHHCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MLFKPHRFVPKTVAAAALAAHGLAAHAAAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDT
CCCCCCCCCCHHHHHHHHHHHCHHHHCCCCEEEEEEEECCCEEECCCCEEEEEEECCCCC
FTDDKASEAIRALYATGFFNDVRVATQGNVVIVQVQERPAIASIDFTGTKEFDKDNLTKA
CCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHH
LRAVGLADGRYYDKALVDKAEQELKRQYLTRGFYAAEVKTTITPVDANRVSILFAVAEGP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCC
SAKIRQINFIGNKAFSTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLEAVRSYYLNR
CCEEEEEEEECCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHCC
GYLEFNIESTQVSISPDKKDMYLTVTLHEGEPYTVSGIKLSGNLLDREAELNKLIKIKPG
CEEEEEEECEEEEECCCCCCEEEEEEEECCCCEEEEEEEEECCEECCCCCCCCEEEECCC
DRFSAEKLQQTTKSIVDKLGEYGYAFATVNAQPDIDQANHKVNLNLVVDPSRRVYVRRIN
CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEE
VVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRVNRLGYFTNVDVTTVPVEGTNDQVD
EECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCEEECCCEEEEEECCCCCEEE
VNVKVDEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKSYRTLTVTQ
EEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCEECCCCEEEEEEECCCCEEEEEEEE
VDPYFTVDGIKRITDVFYRTYQPLYYSTSSSFRIISAGGNLKFGIPFSEVDTVYFGAGFE
ECCEEEHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCEEECCCHHHCCEEEEECCCC
QNRLDVDSNTPQSYQDYVNQFGRVSNTVPLTVAWSRDARDSALIPSRGYFTQANMEYGVP
CCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCEECCC
VGKIQYYKADLQAQYYYSFSRGFILGLNLQGGYGNGIGNPYPIFKNYYAGGIGSVRGYEP
CCEEEEEEECCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
SSLGPRDTKTNDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTST
CCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEECCCCCCCCC
GANGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF
CCCCCEECCCCCCCEECCCCCEEEEECCCHHCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]