| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is guaB [H]
Identifier: 116690012
GI number: 116690012
Start: 2207317
End: 2208777
Strand: Reverse
Name: guaB [H]
Synonym: Bcen2424_1991
Alternate gene names: 116690012
Gene position: 2208777-2207317 (Counterclockwise)
Preceding gene: 116690013
Following gene: 116690011
Centisome position: 63.4
GC content: 66.12
Gene sequence:
>1461_bases ATGCGTCTGATCCAAAAAGCACTCACTTTCGATGACGTGCTCCTCGTTCCCGCCTTCTCCGACGTTCTCCCGCGCGACAC CAGCCTCAAGACCAAGCTGACCCGCAACATCTCCTTGAACATGCCGCTCGTGTCCGCCGCGATGGACACGGTCACCGAAG GTCGCCTCGCGATCGCGATGGCCCAGCAGGGTGGCGTCGGTATCGTCCACAAGAACCTCACGCCGGCCGAACAGGCCCGC GAAGTCGCGAAGGTCAAGCGTTTCGAGTCGGGCGTCGTCCGCGATCCGATCACGGTGCCCCCGCAAATGAAGGTGCGCGA CGTGATCGCGCTGTCGCGCCAGCATGGCATTTCGGGTTTCCCGGTCGTCGAAGGCCCGCAGCTCGTCGGCATCGTCACGA ACCGCGACCTGCGTTTCGAAACGCGCCTCGACGAGCCGGTCAAGTCGATCATGACGCCGCGCGAGCGCCTCGTCACGGTC AAGGAAGGCACGCCGCTCGCCGAAGCGAAGGCGCTGATGCACAGCCACCGCCTCGAGCGCGTGCTGGTCGTCAACGACGC GTTTGAACTGCGCGGCCTGATGACCGTCAAGGACATCACGAAGCAGACCGAGCACCCGGACGCGTGCAAGGACGAACACG GCAAGCTGCGCGCAGGCGCGGCGGTCGGCGTCGGTCCGGACAACGAAGAGCGTGTCGAGCTGCTGGTGCAGGCCGGCGTC GACGTGATCGTCGTCGATACCGCGCACGGTCACAGCAAGGGCGTGCTCGAGCGCGTGCGCTGGGTCAAGCAGAACTTCCC GCACGTCGAGGTGATCGGCGGCAACATCGCGACGGCCGCCGCCGCGAAGGCGCTGATCGAATACGGCGCGGACGCGGTCA AGGTCGGTATCGGCCCGGGTTCGATCTGCACGACGCGGATCGTCGCGGGTGTCGGCGTGCCGCAGATCAGCGCGATCGCG AACGTGTCGGAAGCGCTGAAGGGCACCGGCGTGCCGTGCATCGCGGACGGCGGCGTGCGCTTCTCGGGCGACGTGTCGAA GGCCCTCGCGGCCGGCGCGAATGCGGTGATGATGGGCAGCATGTTCGCAGGCACCGAAGAGGCGCCGGGCGACGTGTTCC TGTACCAGGGCCGCCAGTACAAGTCGTATCGCGGCATGGGTTCGGTCGGTGCGATGAAGGATGGCGCGGCTGACCGCTAC TTCCAGGACAACTCGGCGAACATCGACAAGCTCGTGCCGGAAGGCATCGAAGGCCGTGTCGCGTACAAGGGTTCGGTCAA CGCGATCCTGTTCCAGCTGGTCGGCGGCGTGCGCGCGAGCATGGGCTACTGCGGCTGCAAGACGATCGACGAGCTGCACG AGAAGGCCGAATTCGTCCAGATCACCGCGGCGGGCATGCGCGAGTCGCACGTGCACGACGTGCAGATCACGAAGGAAGCG CCGAACTACCACGTGGACTGA
Upstream 100 bases:
>100_bases TTCGGCCCCCGAACGGCCGAAACCGGCTAAGCCGTTGTTCGTGTTGTGAAAATTCACGGCGCTTCGCGTATAATTCGCTT TTGCGCCCATAGGATTTGCC
Downstream 100 bases:
>100_bases TCGCCGATGAAACCGCTGCTGCGAGCCGTGCTGATCGTCGATGCCGTGCTGCTGCTGGCGTTCGGCGTGCTGTTCGTGCT GACGCCCTGGCAGGCGCTGT
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTKLTRNISLNMPLVSAAMDTVTEGRLAIAMAQQGGVGIVHKNLTPAEQAR EVAKVKRFESGVVRDPITVPPQMKVRDVIALSRQHGISGFPVVEGPQLVGIVTNRDLRFETRLDEPVKSIMTPRERLVTV KEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGPDNEERVELLVQAGV DVIVVDTAHGHSKGVLERVRWVKQNFPHVEVIGGNIATAAAAKALIEYGADAVKVGIGPGSICTTRIVAGVGVPQISAIA NVSEALKGTGVPCIADGGVRFSGDVSKALAAGANAVMMGSMFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVNAILFQLVGGVRASMGYCGCKTIDELHEKAEFVQITAAGMRESHVHDVQITKEA PNYHVD
Sequences:
>Translated_486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTKLTRNISLNMPLVSAAMDTVTEGRLAIAMAQQGGVGIVHKNLTPAEQAR EVAKVKRFESGVVRDPITVPPQMKVRDVIALSRQHGISGFPVVEGPQLVGIVTNRDLRFETRLDEPVKSIMTPRERLVTV KEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGPDNEERVELLVQAGV DVIVVDTAHGHSKGVLERVRWVKQNFPHVEVIGGNIATAAAAKALIEYGADAVKVGIGPGSICTTRIVAGVGVPQISAIA NVSEALKGTGVPCIADGGVRFSGDVSKALAAGANAVMMGSMFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVNAILFQLVGGVRASMGYCGCKTIDELHEKAEFVQITAAGMRESHVHDVQITKEA PNYHVD >Mature_486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTKLTRNISLNMPLVSAAMDTVTEGRLAIAMAQQGGVGIVHKNLTPAEQAR EVAKVKRFESGVVRDPITVPPQMKVRDVIALSRQHGISGFPVVEGPQLVGIVTNRDLRFETRLDEPVKSIMTPRERLVTV KEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGPDNEERVELLVQAGV DVIVVDTAHGHSKGVLERVRWVKQNFPHVEVIGGNIATAAAAKALIEYGADAVKVGIGPGSICTTRIVAGVGVPQISAIA NVSEALKGTGVPCIADGGVRFSGDVSKALAAGANAVMMGSMFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVNAILFQLVGGVRASMGYCGCKTIDELHEKAEFVQITAAGMRESHVHDVQITKEA PNYHVD
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=451, Percent_Identity=43.4589800443459, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI34328928, Length=479, Percent_Identity=41.7536534446764, Blast_Score=364, Evalue=1e-101, Organism=Homo sapiens, GI34328930, Length=479, Percent_Identity=41.7536534446764, Blast_Score=364, Evalue=1e-100, Organism=Homo sapiens, GI156616279, Length=479, Percent_Identity=41.7536534446764, Blast_Score=364, Evalue=1e-100, Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=40.4564315352697, Blast_Score=360, Evalue=2e-99, Organism=Homo sapiens, GI217035152, Length=475, Percent_Identity=41.6842105263158, Blast_Score=358, Evalue=5e-99, Organism=Homo sapiens, GI217035148, Length=451, Percent_Identity=42.5720620842572, Blast_Score=353, Evalue=1e-97, Organism=Homo sapiens, GI217035150, Length=479, Percent_Identity=38.8308977035491, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI156104880, Length=262, Percent_Identity=35.4961832061069, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI50541956, Length=245, Percent_Identity=37.1428571428571, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI50541954, Length=245, Percent_Identity=37.1428571428571, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI50541952, Length=245, Percent_Identity=37.1428571428571, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI50541948, Length=245, Percent_Identity=37.1428571428571, Blast_Score=159, Evalue=6e-39, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=62.4229979466119, Blast_Score=579, Evalue=1e-166, Organism=Escherichia coli, GI1786293, Length=238, Percent_Identity=33.6134453781513, Blast_Score=137, Evalue=1e-33, Organism=Caenorhabditis elegans, GI71994385, Length=478, Percent_Identity=37.4476987447699, Blast_Score=304, Evalue=7e-83, Organism=Caenorhabditis elegans, GI71994389, Length=425, Percent_Identity=39.0588235294118, Blast_Score=288, Evalue=3e-78, Organism=Caenorhabditis elegans, GI17560440, Length=239, Percent_Identity=36.4016736401674, Blast_Score=162, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6322012, Length=488, Percent_Identity=38.9344262295082, Blast_Score=351, Evalue=1e-97, Organism=Saccharomyces cerevisiae, GI6323585, Length=484, Percent_Identity=39.6694214876033, Blast_Score=350, Evalue=3e-97, Organism=Saccharomyces cerevisiae, GI6323464, Length=484, Percent_Identity=39.4628099173554, Blast_Score=342, Evalue=6e-95, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=39.1812865497076, Blast_Score=262, Evalue=7e-71, Organism=Saccharomyces cerevisiae, GI6319353, Length=142, Percent_Identity=35.2112676056338, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI24641071, Length=485, Percent_Identity=40.4123711340206, Blast_Score=350, Evalue=2e-96, Organism=Drosophila melanogaster, GI24641073, Length=485, Percent_Identity=40.4123711340206, Blast_Score=350, Evalue=2e-96, Organism=Drosophila melanogaster, GI28571163, Length=443, Percent_Identity=41.0835214446953, Blast_Score=316, Evalue=2e-86,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51993; Mature: 51993
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTKLTRNISLNMPLVSAAMDTVTEGRLAIAM CCHHHHHCCCCCEEEECCHHHHCCCCCCCHHEEECCEEECCCHHHHHHHHHCCCCEEEEE AQQGGVGIVHKNLTPAEQAREVAKVKRFESGVVRDPITVPPQMKVRDVIALSRQHGISGF ECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC PVVEGPQLVGIVTNRDLRFETRLDEPVKSIMTPRERLVTVKEGTPLAEAKALMHSHRLER CEECCCEEEEEEECCCEEEHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCCE VLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGPDNEERVELLVQAGV EEEEECHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEECEEECCCCCCHHHHHHHHHCCC DVIVVDTAHGHSKGVLERVRWVKQNFPHVEVIGGNIATAAAAKALIEYGADAVKVGIGPG CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC SICTTRIVAGVGVPQISAIANVSEALKGTGVPCIADGGVRFSGDVSKALAAGANAVMMGS CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEECCCHHHHHHCCCCEEEECH MFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRYFQDNSANIDKLVPEGIEGRV HHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE AYKGSVNAILFQLVGGVRASMGYCGCKTIDELHEKAEFVQITAAGMRESHVHDVQITKEA EECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECC PNYHVD CCCCCC >Mature Secondary Structure MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTKLTRNISLNMPLVSAAMDTVTEGRLAIAM CCHHHHHCCCCCEEEECCHHHHCCCCCCCHHEEECCEEECCCHHHHHHHHHCCCCEEEEE AQQGGVGIVHKNLTPAEQAREVAKVKRFESGVVRDPITVPPQMKVRDVIALSRQHGISGF ECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC PVVEGPQLVGIVTNRDLRFETRLDEPVKSIMTPRERLVTVKEGTPLAEAKALMHSHRLER CEECCCEEEEEEECCCEEEHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCCE VLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGPDNEERVELLVQAGV EEEEECHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEECEEECCCCCCHHHHHHHHHCCC DVIVVDTAHGHSKGVLERVRWVKQNFPHVEVIGGNIATAAAAKALIEYGADAVKVGIGPG CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC SICTTRIVAGVGVPQISAIANVSEALKGTGVPCIADGGVRFSGDVSKALAAGANAVMMGS CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEECCCHHHHHHCCCCEEEECH MFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRYFQDNSANIDKLVPEGIEGRV HHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE AYKGSVNAILFQLVGGVRASMGYCGCKTIDELHEKAEFVQITAAGMRESHVHDVQITKEA EECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECC PNYHVD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA