Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689419

Identifier: 116689419

GI number: 116689419

Start: 1541374

End: 1541826

Strand: Direct

Name: 116689419

Synonym: Bcen2424_1397

Alternate gene names: NA

Gene position: 1541374-1541826 (Clockwise)

Preceding gene: 116689418

Following gene: 116689420

Centisome position: 44.24

GC content: 69.09

Gene sequence:

>453_bases
ATGACGACGCGCCCCGTCTACGGCACCCCCGCGTGGGTCCGCGTGCTGCTGTCGCAGCCGTGGGTCCTGCCGCTCGCGCG
CCTCGCGCTGGTGTCCGCCTATCTGCTCGGCGGCGTCGCGAAGGCGCTCGACTTCCCCGGCGCGGTCGCGGAGCAGGCGC
ATTTCGGCCTGCAGCCGGCCGCGCTGTGGGCGGCCCTCGCGATCGCGGTCGAGATCGCGGGCTCGCTGTGCGTGGTGTTT
CGCCGCTTCACGTGGCTCGGCGCCGGCAGTCTCGGCATGCTGACGCTCGTCGCGATGGTCGTGGCGAACGATTTCTGGAA
CCGTTCGGGCGCCGAACATTTCATGGCGCTCAACAGCTTTTTCGAGCATCTCGGGCTGATCGCGGCACTCGTGCTCGCGA
CCATGCTCGACGATGCGCGGCAATCGGCCGATGATGGCCGTTCCATTCGATGA

Upstream 100 bases:

>100_bases
CACCAGCATGCGCACGCGGGCGCGTGGGGCCGCACGTTGCCGACGTCGGACGCGAAGGGCTTCTGGGGCGCGTTCGGGTG
CTCGTGCTGGGCGGTCTGAC

Downstream 100 bases:

>100_bases
CGATGCAACAACCAGGAAATCCAGTGATGAAATCCGTTCGTTCCGTGCTGCTCGCCGCGATGCTCGCGGGCGGCCTCGCC
GTTGCCCCCGTGACGTTCGC

Product: DoxX family protein

Products: NA

Alternate protein names: DoxX Family

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MTTRPVYGTPAWVRVLLSQPWVLPLARLALVSAYLLGGVAKALDFPGAVAEQAHFGLQPAALWAALAIAVEIAGSLCVVF
RRFTWLGAGSLGMLTLVAMVVANDFWNRSGAEHFMALNSFFEHLGLIAALVLATMLDDARQSADDGRSIR

Sequences:

>Translated_150_residues
MTTRPVYGTPAWVRVLLSQPWVLPLARLALVSAYLLGGVAKALDFPGAVAEQAHFGLQPAALWAALAIAVEIAGSLCVVF
RRFTWLGAGSLGMLTLVAMVVANDFWNRSGAEHFMALNSFFEHLGLIAALVLATMLDDARQSADDGRSIR
>Mature_149_residues
TTRPVYGTPAWVRVLLSQPWVLPLARLALVSAYLLGGVAKALDFPGAVAEQAHFGLQPAALWAALAIAVEIAGSLCVVFR
RFTWLGAGSLGMLTLVAMVVANDFWNRSGAEHFMALNSFFEHLGLIAALVLATMLDDARQSADDGRSIR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16081; Mature: 15950

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRPVYGTPAWVRVLLSQPWVLPLARLALVSAYLLGGVAKALDFPGAVAEQAHFGLQPA
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHH
ALWAALAIAVEIAGSLCVVFRRFTWLGAGSLGMLTLVAMVVANDFWNRSGAEHFMALNSF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FEHLGLIAALVLATMLDDARQSADDGRSIR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TTRPVYGTPAWVRVLLSQPWVLPLARLALVSAYLLGGVAKALDFPGAVAEQAHFGLQPA
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHH
ALWAALAIAVEIAGSLCVVFRRFTWLGAGSLGMLTLVAMVVANDFWNRSGAEHFMALNSF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FEHLGLIAALVLATMLDDARQSADDGRSIR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA