| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689367
Identifier: 116689367
GI number: 116689367
Start: 1484058
End: 1484498
Strand: Direct
Name: 116689367
Synonym: Bcen2424_1345
Alternate gene names: NA
Gene position: 1484058-1484498 (Clockwise)
Preceding gene: 116689366
Following gene: 116689369
Centisome position: 42.6
GC content: 64.4
Gene sequence:
>441_bases ATGACGCACTCGCCGCTGAATGTTCATCCCGCCGTCGCGAAATCGCTCGACGCATGGCACGCGATGGTCGAACGCAAGGA TTTCGGCACGCTGGAATCGATCGTCCATCCGGACGCCACGTTCCGTTCGCCGATGGCGTTCAAGCCGTACGGGCCGGCAC CCGCGCTGCTGATGGCGCTGCGCACGGTGATCACGATCCTCGAGAACTTCACGTATCACCGCCAGTTCGCGACCGACGAC GGCAAGAGCGTCGTACTGGAGTTCGGCGCGACCATCGGCGACAAGGCGTTGAAGGGAATCGACATGATCCGCTTCGACGA CGACGGCCGGATCGTCGACTTCGAGGTGATGATCCGGCCGTTCAATGCGCTGCAGGCGCTCGGCGCGGAGATGGGCGCGC GGCTCGGGCAGCAGTTGCCGGCGTTCAAGACCGGCGGTTGA
Upstream 100 bases:
>100_bases TCGATGCGAAGCGCGCGATTCACCAGGGCACGACGCTGGCCGCGACCCTTTGATACCGATTCGTTTCTTCCCCCGTCCAA CCACGTTACTGGAGACTGCG
Downstream 100 bases:
>100_bases GCGGGGTGGCGGCTAGCGTGCAACCGACTTGCGGCCGCGTTGCGGAGCCCCGCGCGCGAGGTTGTGCGCGGCCTCGACGA GGCGCGCGGCGGGCATGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NADH Flavin Oxidoreductase/NADH Oxidase; NADHFlavin Oxidoreductase/Nadh Oxidase
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTHSPLNVHPAVAKSLDAWHAMVERKDFGTLESIVHPDATFRSPMAFKPYGPAPALLMALRTVITILENFTYHRQFATDD GKSVVLEFGATIGDKALKGIDMIRFDDDGRIVDFEVMIRPFNALQALGAEMGARLGQQLPAFKTGG
Sequences:
>Translated_146_residues MTHSPLNVHPAVAKSLDAWHAMVERKDFGTLESIVHPDATFRSPMAFKPYGPAPALLMALRTVITILENFTYHRQFATDD GKSVVLEFGATIGDKALKGIDMIRFDDDGRIVDFEVMIRPFNALQALGAEMGARLGQQLPAFKTGG >Mature_145_residues THSPLNVHPAVAKSLDAWHAMVERKDFGTLESIVHPDATFRSPMAFKPYGPAPALLMALRTVITILENFTYHRQFATDDG KSVVLEFGATIGDKALKGIDMIRFDDDGRIVDFEVMIRPFNALQALGAEMGARLGQQLPAFKTGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16030; Mature: 15899
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSPLNVHPAVAKSLDAWHAMVERKDFGTLESIVHPDATFRSPMAFKPYGPAPALLMAL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH RTVITILENFTYHRQFATDDGKSVVLEFGATIGDKALKGIDMIRFDDDGRIVDFEVMIRP HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCEEEHHHEECC FNALQALGAEMGARLGQQLPAFKTGG HHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure THSPLNVHPAVAKSLDAWHAMVERKDFGTLESIVHPDATFRSPMAFKPYGPAPALLMAL CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH RTVITILENFTYHRQFATDDGKSVVLEFGATIGDKALKGIDMIRFDDDGRIVDFEVMIRP HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCEEEHHHEECC FNALQALGAEMGARLGQQLPAFKTGG HHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA