| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is qor [H]
Identifier: 116689359
GI number: 116689359
Start: 1473079
End: 1474089
Strand: Direct
Name: qor [H]
Synonym: Bcen2424_1337
Alternate gene names: 116689359
Gene position: 1473079-1474089 (Clockwise)
Preceding gene: 116689358
Following gene: 116689360
Centisome position: 42.28
GC content: 67.66
Gene sequence:
>1011_bases ATGACTCAATTCATTCATCAAGCATCATTGCCGGCCCGCTATCGGGCGTGGACCTGGCAAGGCAGCGAGCATCCCGCGCA GTTGCGTCTCGAACAACGCGAAATGCCGGGGCTGAAGCCCGGCCAGGTGCTGGTCCGCAACCACGCGATCGGTCTCAATC CGGTCGACTGGAAAGTGCTTGGCGGCGCGCTCGTGAACTGGCGTCTCGGGCATGTGCCCGGCGTCGATGGCGCGGGCACG GTGGTCGCGGTTGCGGACGACGCGATGCGCTACCTGCTGGGCCGCCGCGTCGCCTATCATCAGGCGCTCGGCGAGCACGG GAGTTTCGCGGAATACACGCCGGTTGCGGCCGGCGTGCTGCTGACGGTGCCCGACACGCTCGATTTCGAAACGGCGGCGA GCGTCCCGTGCCCGGCGCTGACCGCATGGCAGGCGCTCGAGAAGGTACCGTGCCGCGTGGCGAGGGAAATCCTCGTCAGC GGCGCGGGTGGCGCGGTCGGCAACTACCTGGTGCAGATCGCCGCCGATCGCGGGTTCGTGGTGTCGGTGTCGAGCCACGA ACGACATTGGGAGCGCCTGCGCGAGCGAGGGGCAAGCCATTTCCTGCCGGGCGCCGTCGATGAAACGATCGGCGCGACGC CCGAACTGGCCCGGCGTTTCTATGCGGTGTTCGACAGCATCGATGCGCGGTATGCGGCCCGCTGGGCACCTGCAGTGGCC GCGAACGGGCATATCGTGTGCATCCAGGGGCGCTTCGACACGCCGCCGCTGCCGCCGTTCACGTCGAGCGCGTCGCTTCA TGAAGTCGCGCTGAATGCGTTGCACACGTATGGCGACGATGCGGCGTGGCTCGAGACGACCACGGCGGGCAGCATGCTGC TCGCCGGTATCGCGAACGGCCGGATGCAACCCGAAGCACGCGTCACGGGCGACTTCGAGAAGTTGCCCGCACAGCTGGAA GGGCTCCGGCATCGGCGGTTCTCGGGCAAGCCCGTGGTGCTGGTCGACTGA
Upstream 100 bases:
>100_bases AAATCGCATCGACGGGCGGAACTCCGATGCGGGGTCCGTTGCATTCGCACTTGCACGGGATCGCCGAGCGCCCGTCGCGT GTCACACCATGCCCATCCCC
Downstream 100 bases:
>100_bases CGGGCGCGATCGGCCGTCGACGCATGCCGTTTCCGGCCGAATTCCCGTGCCGTTTGCCTAAAACTCCCGAACCGCGTCGA TCCGACGTCAAATCCGAAAT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTQFIHQASLPARYRAWTWQGSEHPAQLRLEQREMPGLKPGQVLVRNHAIGLNPVDWKVLGGALVNWRLGHVPGVDGAGT VVAVADDAMRYLLGRRVAYHQALGEHGSFAEYTPVAAGVLLTVPDTLDFETAASVPCPALTAWQALEKVPCRVAREILVS GAGGAVGNYLVQIAADRGFVVSVSSHERHWERLRERGASHFLPGAVDETIGATPELARRFYAVFDSIDARYAARWAPAVA ANGHIVCIQGRFDTPPLPPFTSSASLHEVALNALHTYGDDAAWLETTTAGSMLLAGIANGRMQPEARVTGDFEKLPAQLE GLRHRRFSGKPVVLVD
Sequences:
>Translated_336_residues MTQFIHQASLPARYRAWTWQGSEHPAQLRLEQREMPGLKPGQVLVRNHAIGLNPVDWKVLGGALVNWRLGHVPGVDGAGT VVAVADDAMRYLLGRRVAYHQALGEHGSFAEYTPVAAGVLLTVPDTLDFETAASVPCPALTAWQALEKVPCRVAREILVS GAGGAVGNYLVQIAADRGFVVSVSSHERHWERLRERGASHFLPGAVDETIGATPELARRFYAVFDSIDARYAARWAPAVA ANGHIVCIQGRFDTPPLPPFTSSASLHEVALNALHTYGDDAAWLETTTAGSMLLAGIANGRMQPEARVTGDFEKLPAQLE GLRHRRFSGKPVVLVD >Mature_335_residues TQFIHQASLPARYRAWTWQGSEHPAQLRLEQREMPGLKPGQVLVRNHAIGLNPVDWKVLGGALVNWRLGHVPGVDGAGTV VAVADDAMRYLLGRRVAYHQALGEHGSFAEYTPVAAGVLLTVPDTLDFETAASVPCPALTAWQALEKVPCRVAREILVSG AGGAVGNYLVQIAADRGFVVSVSSHERHWERLRERGASHFLPGAVDETIGATPELARRFYAVFDSIDARYAARWAPAVAA NGHIVCIQGRFDTPPLPPFTSSASLHEVALNALHTYGDDAAWLETTTAGSMLLAGIANGRMQPEARVTGDFEKLPAQLEG LRHRRFSGKPVVLVD
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239676, Length=179, Percent_Identity=31.2849162011173, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI194239674, Length=179, Percent_Identity=32.4022346368715, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI13236495, Length=179, Percent_Identity=32.4022346368715, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI24308257, Length=172, Percent_Identity=30.2325581395349, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17507255, Length=177, Percent_Identity=37.2881355932203, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 36368; Mature: 36237
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFIHQASLPARYRAWTWQGSEHPAQLRLEQREMPGLKPGQVLVRNHAIGLNPVDWKVL CCCCHHHCCCCCHHEEEEECCCCCHHHEEEHHHCCCCCCCCCEEEECCCCCCCCCCHHHH GGALVNWRLGHVPGVDGAGTVVAVADDAMRYLLGRRVAYHQALGEHGSFAEYTPVAAGVL CCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEE LTVPDTLDFETAASVPCPALTAWQALEKVPCRVAREILVSGAGGAVGNYLVQIAADRGFV EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEECCCCEE VSVSSHERHWERLRERGASHFLPGAVDETIGATPELARRFYAVFDSIDARYAARWAPAVA EEECCHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE ANGHIVCIQGRFDTPPLPPFTSSASLHEVALNALHTYGDDAAWLETTTAGSMLLAGIANG CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCC RMQPEARVTGDFEKLPAQLEGLRHRRFSGKPVVLVD CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEC >Mature Secondary Structure TQFIHQASLPARYRAWTWQGSEHPAQLRLEQREMPGLKPGQVLVRNHAIGLNPVDWKVL CCCHHHCCCCCHHEEEEECCCCCHHHEEEHHHCCCCCCCCCEEEECCCCCCCCCCHHHH GGALVNWRLGHVPGVDGAGTVVAVADDAMRYLLGRRVAYHQALGEHGSFAEYTPVAAGVL CCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEE LTVPDTLDFETAASVPCPALTAWQALEKVPCRVAREILVSGAGGAVGNYLVQIAADRGFV EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEECCCCEE VSVSSHERHWERLRERGASHFLPGAVDETIGATPELARRFYAVFDSIDARYAARWAPAVA EEECCHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE ANGHIVCIQGRFDTPPLPPFTSSASLHEVALNALHTYGDDAAWLETTTAGSMLLAGIANG CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCC RMQPEARVTGDFEKLPAQLEGLRHRRFSGKPVVLVD CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]