| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yeaS [C]
Identifier: 116689313
GI number: 116689313
Start: 1419966
End: 1420625
Strand: Direct
Name: yeaS [C]
Synonym: Bcen2424_1291
Alternate gene names: 116689313
Gene position: 1419966-1420625 (Clockwise)
Preceding gene: 116689312
Following gene: 162227934
Centisome position: 40.76
GC content: 67.73
Gene sequence:
>660_bases ATGTTCGGCCACGCACTCGGCATCACGGATATCTGGACCTACGTGTTCGGCGTGATCTTCATCATCCTGCTGCCGGGGCC GAACTCGATGTACGTGCTGTCGCTTGCCGCGCAGCGCGGCGTGAAGGCCGGCTATCGCGCGGCCTGCGGCGTGTTCGTCG GCGATACCGTGCTGATGGTGCTGTCCGCCGCGGGCGTCGCGTCGCTGCTGAAGGCGAACCCGCTGCTGTTCTCCGTCGTC AAGTACGGCGGCGCCGCCTACCTGCTGTACATCGGCACCGGGATGCTGCGCGGCGCGTGGAGCAAGCTGCGCGCGCGCGG CGATGCGCCGGTCGAGGCGCCGCAGGCGGTCGACGGCGAGCGGCCATTCCGGAAAGCACTGATCGTGAGCCTGCTGAATC CGAAGGCGATCCTGTTCTTCATCTCGTTCTTCATCCAGTTCGTCGACCCGGCATTCCCGCATCCCGCGCTGTCGTTCGTC GTGCTCGGGGCGATCGCGCAATGCGCGAGCTTCCTGTACCTGAGCACGCTGATCTTCGCGGGGGCGCGGCTCGCCGAGCA CTTCCGCCGCCGCCGCAAGCTCGCGGCAGGCGCGGCGAGCAGCGTGGGCGGCCTGTTCATCGGTTTCTCGGTGAAGCTGG CGCTGGCGACCATGAGCTGA
Upstream 100 bases:
>100_bases CATCGGCTATCTGTTCGACCGTTTCACCGCGCTGATGGACGCGGCGAAGCAGCGCAACGCCTGAGTCACTGACGCAACCG AAGAACGGGAGATTCACATC
Downstream 100 bases:
>100_bases GCGCCGCCGGCCGACCCACGACAACGATTACTTATTGAATTCACAAGCCATGCCAAAACGCACAGACATCAAGAGCATCC TCATCATCGGCGCCGGCCCG
Product: leucine export protein LeuE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MFGHALGITDIWTYVFGVIFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGTGMLRGAWSKLRARGDAPVEAPQAVDGERPFRKALIVSLLNPKAILFFISFFIQFVDPAFPHPALSFV VLGAIAQCASFLYLSTLIFAGARLAEHFRRRRKLAAGAASSVGGLFIGFSVKLALATMS
Sequences:
>Translated_219_residues MFGHALGITDIWTYVFGVIFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGTGMLRGAWSKLRARGDAPVEAPQAVDGERPFRKALIVSLLNPKAILFFISFFIQFVDPAFPHPALSFV VLGAIAQCASFLYLSTLIFAGARLAEHFRRRRKLAAGAASSVGGLFIGFSVKLALATMS >Mature_219_residues MFGHALGITDIWTYVFGVIFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGTGMLRGAWSKLRARGDAPVEAPQAVDGERPFRKALIVSLLNPKAILFFISFFIQFVDPAFPHPALSFV VLGAIAQCASFLYLSTLIFAGARLAEHFRRRRKLAAGAASSVGGLFIGFSVKLALATMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788099, Length=209, Percent_Identity=47.3684210526316, Blast_Score=197, Evalue=5e-52, Organism=Escherichia coli, GI48994979, Length=151, Percent_Identity=27.8145695364238, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI48994978, Length=198, Percent_Identity=28.7878787878788, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1786522, Length=120, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004778 - InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 23294; Mature: 23294
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGHALGITDIWTYVFGVIFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHH LSAAGVASLLKANPLLFSVVKYGGAAYLLYIGTGMLRGAWSKLRARGDAPVEAPQAVDGE HHHHHHHHHHHCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC RPFRKALIVSLLNPKAILFFISFFIQFVDPAFPHPALSFVVLGAIAQCASFLYLSTLIFA CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GARLAEHFRRRRKLAAGAASSVGGLFIGFSVKLALATMS HHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHEEEECC >Mature Secondary Structure MFGHALGITDIWTYVFGVIFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHH LSAAGVASLLKANPLLFSVVKYGGAAYLLYIGTGMLRGAWSKLRARGDAPVEAPQAVDGE HHHHHHHHHHHCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC RPFRKALIVSLLNPKAILFFISFFIQFVDPAFPHPALSFVVLGAIAQCASFLYLSTLIFA CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GARLAEHFRRRRKLAAGAASSVGGLFIGFSVKLALATMS HHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8169201; 10984043 [H]