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The map label for this gene is ynfA [C]

Identifier: 116689305

GI number: 116689305

Start: 1412036

End: 1412434

Strand: Direct

Name: ynfA [C]

Synonym: Bcen2424_1283

Alternate gene names: 116689305

Gene position: 1412036-1412434 (Clockwise)

Preceding gene: 116689302

Following gene: 116689309

Centisome position: 40.53

GC content: 73.18

Gene sequence:

>399_bases
ATGATCGGCGGCGCGCGGCGCGGCCGTGCCGGCCGCCGCGACGGGGCTGAATTCGCGAGGAACCGGATGACCGAACTGAT
GAGGATCGCGGCGCTGTTCGCCGCTACCGCGCTGGCCGAAATCGTCGGCTGTTACCTGCCGTGGCTCGTGCTGAAGGCCG
GGCGCCCGGCCTGGCTGCTGGTGCCCGCCGCACTGTCGCTCGCGCTGTTCGCGTGGCTGCTGACGCTGCATCCGAGCGCG
GCGGGGCGCACGTATGCCGCGTACGGCGGCGTCTATATCGCGGTGGCGTTGATCTGGCTGCGGGTGGTCGACGGCGTCGC
GCTGACCCGCTGGGACGTGGCCGGCGCGGTGCTCGCGCTCGGCGGAATGGCCGTCATCGCGCTGCAGCCGCGCGCCTGA

Upstream 100 bases:

>100_bases
GAATGTTGAAACAGGCGACATGATAGCACGATGACGGATGATCGTGCAAATTGCCCGGAATCGCCCGTCTGGCGGGGCAT
CCCGGGGAGCCTGCTCGGGT

Downstream 100 bases:

>100_bases
GCGGCGCGTGCCGCGTGCCTCAGGCTGCTTCGGCGGTATCCGTGTCGGCGGGCTGGCGCCACACGCAGGTGCCCTTGACC
GACTTGTCGAGCTCGTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIGGARRGRAGRRDGAEFARNRMTELMRIAALFAATALAEIVGCYLPWLVLKAGRPAWLLVPAALSLALFAWLLTLHPSA
AGRTYAAYGGVYIAVALIWLRVVDGVALTRWDVAGAVLALGGMAVIALQPRA

Sequences:

>Translated_132_residues
MIGGARRGRAGRRDGAEFARNRMTELMRIAALFAATALAEIVGCYLPWLVLKAGRPAWLLVPAALSLALFAWLLTLHPSA
AGRTYAAYGGVYIAVALIWLRVVDGVALTRWDVAGAVLALGGMAVIALQPRA
>Mature_132_residues
MIGGARRGRAGRRDGAEFARNRMTELMRIAALFAATALAEIVGCYLPWLVLKAGRPAWLLVPAALSLALFAWLLTLHPSA
AGRTYAAYGGVYIAVALIWLRVVDGVALTRWDVAGAVLALGGMAVIALQPRA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=101, Percent_Identity=63.3663366336634, Blast_Score=129, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 14000; Mature: 14000

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGGARRGRAGRRDGAEFARNRMTELMRIAALFAATALAEIVGCYLPWLVLKAGRPAWLL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEH
VPAALSLALFAWLLTLHPSAAGRTYAAYGGVYIAVALIWLRVVDGVALTRWDVAGAVLAL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
GGMAVIALQPRA
CCEEEEEECCCC
>Mature Secondary Structure
MIGGARRGRAGRRDGAEFARNRMTELMRIAALFAATALAEIVGCYLPWLVLKAGRPAWLL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEH
VPAALSLALFAWLLTLHPSAAGRTYAAYGGVYIAVALIWLRVVDGVALTRWDVAGAVLAL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
GGMAVIALQPRA
CCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA