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The map label for this gene is ywnA [H]

Identifier: 116689227

GI number: 116689227

Start: 1328743

End: 1329198

Strand: Direct

Name: ywnA [H]

Synonym: Bcen2424_1205

Alternate gene names: 116689227

Gene position: 1328743-1329198 (Clockwise)

Preceding gene: 116689226

Following gene: 116689228

Centisome position: 38.14

GC content: 69.3

Gene sequence:

>456_bases
ATGAATACCAGCAGCCGGTTCGCGTTTGCCGTTCACGTGCTTGCCTTGCTGTCGATGCAGGAAGGCGTGCCGTTGTCGTC
CGACATCATCGCGGGCAGCGTGAATACGAATCCGGCGCTGATTCGCCGGTTGCTGTCGATGCTGGCGGCCGCGGGCCTGA
CCACGTCGCAGCTCGGCGCGGGCGGCGGTGCGCTGCTGGCGCGCGAGCCCGGTGAGATCACGCTGCTCGACGTGTATCGC
GCGGTCGACGATGCGCAACTGTTCGCGCTGCACCGCGAGGCGCCGAATCCGGCGTGTCTCGTCGGGCGGCACATCCAGGG
CGTGCTGACCGGCTATATCGGCGACGCGCAGCGCGCAATGGAGGCTTCGCTCGCCACGCGCACGCTGGTCGACGTGACGG
CCGACATGCTGGATCGGGAGCAGCGCACGCAACGGGCGGCGCGCGCCGGGGGGTGA

Upstream 100 bases:

>100_bases
CGGCGAATGACGCGGGCTTGCACGATTCGCAAAATGTAATTATGATGGTTACACAAGTCGCCGGTTGCGGGTCGGGCCGG
CGTCGCCGAGTGAGTCAGGA

Downstream 100 bases:

>100_bases
CCGACGGCGGGCAGGGCAGGAAGCCGGACGGCGCGTACGCGCGGCGATCGGCGCAACGGGGGCTTCGCCCCGTTTTTTTC
GGTCTTATGTGTAATTAACT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNTSSRFAFAVHVLALLSMQEGVPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPGEITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLTGYIGDAQRAMEASLATRTLVDVTADMLDREQRTQRAARAGG

Sequences:

>Translated_151_residues
MNTSSRFAFAVHVLALLSMQEGVPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPGEITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLTGYIGDAQRAMEASLATRTLVDVTADMLDREQRTQRAARAGG
>Mature_151_residues
MNTSSRFAFAVHVLALLSMQEGVPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPGEITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLTGYIGDAQRAMEASLATRTLVDVTADMLDREQRTQRAARAGG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15867; Mature: 15867

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSSRFAFAVHVLALLSMQEGVPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCC
GGGALLAREPGEITLLDVYRAVDDAQLFALHREAPNPACLVGRHIQGVLTGYIGDAQRAM
CCCEEEECCCCCEEHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EASLATRTLVDVTADMLDREQRTQRAARAGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTSSRFAFAVHVLALLSMQEGVPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCC
GGGALLAREPGEITLLDVYRAVDDAQLFALHREAPNPACLVGRHIQGVLTGYIGDAQRAM
CCCEEEECCCCCEEHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EASLATRTLVDVTADMLDREQRTQRAARAGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]