| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689226
Identifier: 116689226
GI number: 116689226
Start: 1328224
End: 1328652
Strand: Direct
Name: 116689226
Synonym: Bcen2424_1204
Alternate gene names: NA
Gene position: 1328224-1328652 (Clockwise)
Preceding gene: 116689222
Following gene: 116689227
Centisome position: 38.12
GC content: 72.26
Gene sequence:
>429_bases ATGAACATGAAGACATCGCGGGCGCGTCGTGTGCCCGGGTCCGTGCTGGCGGCCGTGGCCGCCGGTGCGCTGCTGTTGCT CGCGGGCTGCGAGAAGTCCGGCACGCCGGCCGCGCAACCCGATACGGCCGCGAGCGCGGCCGCCGATGCCGCGAACAATG CGGCCAAGGCGCTCGACCAGGTGGCGAGCACCGTCAATCAACAGATTAACGCGGCGAAGGCCGGCATCGCGTCCGCGGCG TCGGCCGTGCCGCCGCTGTCCGCGAGCGGCCTCGCATCGGCCGCGCAGGCGCAGATCGACGCGGCGGCGTCCGCGGTCGT CGCGCATGCGGCTTCCGAAGCGGGCGCGAAGATCGCCGAAGCCGGCAAGAAACTCCAGCAGTGGAGCCAGCAGAACGCCG CGGGGGCGAAATCCGCGAGCGGCGAATGA
Upstream 100 bases:
>100_bases GCATTTTTAATGACGGGTCGTTATTTGGCCTGTTCCACAGGCGGTATCATCGACACCGGTCCAACCACGAGGTCGCGCCA CGCGCGGCCGGAGATTGCTG
Downstream 100 bases:
>100_bases CGCGGGCTTGCACGATTCGCAAAATGTAATTATGATGGTTACACAAGTCGCCGGTTGCGGGTCGGGCCGGCGTCGCCGAG TGAGTCAGGAATGAATACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNMKTSRARRVPGSVLAAVAAGALLLLAGCEKSGTPAAQPDTAASAAADAANNAAKALDQVASTVNQQINAAKAGIASAA SAVPPLSASGLASAAQAQIDAAASAVVAHAASEAGAKIAEAGKKLQQWSQQNAAGAKSASGE
Sequences:
>Translated_142_residues MNMKTSRARRVPGSVLAAVAAGALLLLAGCEKSGTPAAQPDTAASAAADAANNAAKALDQVASTVNQQINAAKAGIASAA SAVPPLSASGLASAAQAQIDAAASAVVAHAASEAGAKIAEAGKKLQQWSQQNAAGAKSASGE >Mature_142_residues MNMKTSRARRVPGSVLAAVAAGALLLLAGCEKSGTPAAQPDTAASAAADAANNAAKALDQVASTVNQQINAAKAGIASAA SAVPPLSASGLASAAQAQIDAAASAVVAHAASEAGAKIAEAGKKLQQWSQQNAAGAKSASGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13515; Mature: 13515
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMKTSRARRVPGSVLAAVAAGALLLLAGCEKSGTPAAQPDTAASAAADAANNAAKALDQ CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VASTVNQQINAAKAGIASAASAVPPLSASGLASAAQAQIDAAASAVVAHAASEAGAKIAE HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGKKLQQWSQQNAAGAKSASGE HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNMKTSRARRVPGSVLAAVAAGALLLLAGCEKSGTPAAQPDTAASAAADAANNAAKALDQ CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VASTVNQQINAAKAGIASAASAVPPLSASGLASAAQAQIDAAASAVVAHAASEAGAKIAE HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGKKLQQWSQQNAAGAKSASGE HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA